Wall clock time and date at job start Sun Mar 7 2021 06:37:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35975 * 117.00575 * 2 1 4 4 C 1.38677 * 120.00440 * 179.97438 * 3 2 1 5 5 C 1.38155 * 120.00022 * 180.02562 * 4 3 2 6 6 C 1.50702 * 119.99563 * 179.97438 * 5 4 3 7 7 O 1.42905 * 109.46843 * 105.02876 * 6 5 4 8 8 Si 1.86291 * 109.47565 * 345.02814 * 6 5 4 9 9 C 1.38673 * 119.99955 * 0.02562 * 5 4 3 10 10 O 1.35985 * 119.99559 * 180.02562 * 9 5 4 11 11 C 1.42901 * 116.99650 * 179.97438 * 10 9 5 12 12 C 1.50704 * 109.46992 * 179.97438 * 11 10 9 13 13 O 1.21274 * 119.99891 * 0.02562 * 12 11 10 14 14 N 1.34782 * 119.99981 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00085 * 179.97438 * 14 12 11 16 16 H 1.09005 * 112.84665 * 334.66693 * 15 14 12 17 17 C 1.53781 * 113.61395 * 105.86132 * 15 14 12 18 18 C 1.54055 * 86.98323 * 89.16267 * 17 15 14 19 19 H 1.08998 * 113.69152 * 270.87271 * 18 17 15 20 20 C 1.52995 * 113.61834 * 139.97437 * 18 17 15 21 21 S 1.81402 * 109.46734 * 87.50843 * 20 18 17 22 22 C 1.81408 * 103.00029 * 180.02562 * 21 20 18 23 23 C 1.53782 * 113.61418 * 203.47365 * 15 14 12 24 24 C 1.38716 * 120.00239 * 0.27031 * 9 5 4 25 25 C 1.38113 * 119.99817 * 359.45193 * 24 9 5 26 26 H 1.09005 * 109.46807 * 59.99903 * 1 2 3 27 27 H 1.08997 * 109.47645 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47396 * 300.00618 * 1 2 3 29 29 H 1.07997 * 119.99583 * 0.04994 * 4 3 2 30 30 H 1.09000 * 109.47043 * 225.02338 * 6 5 4 31 31 H 0.96701 * 114.00029 * 59.99170 * 7 6 5 32 32 H 1.48496 * 110.00381 * 178.68173 * 8 6 5 33 33 H 1.48504 * 109.99951 * 299.99765 * 8 6 5 34 34 H 1.08996 * 109.47352 * 299.99791 * 11 10 9 35 35 H 1.08999 * 109.47144 * 59.99816 * 11 10 9 36 36 H 0.96998 * 119.99384 * 0.02562 * 14 12 11 37 37 H 1.08994 * 113.61175 * 203.66405 * 17 15 14 38 38 H 1.08997 * 113.61183 * 334.56951 * 17 15 14 39 39 H 1.08998 * 109.47541 * 207.50513 * 20 18 17 40 40 H 1.08999 * 109.47513 * 327.50761 * 20 18 17 41 41 H 1.09003 * 109.46869 * 300.00077 * 22 21 20 42 42 H 1.08998 * 109.47156 * 59.99837 * 22 21 20 43 43 H 1.08997 * 109.47047 * 180.02562 * 22 21 20 44 44 H 1.08995 * 113.61357 * 25.43044 * 23 15 14 45 45 H 1.08995 * 113.61198 * 156.24997 * 23 15 14 46 46 H 1.08000 * 120.00109 * 179.70706 * 24 9 5 47 47 H 1.08000 * 119.99985 * 180.25559 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2115 0.0000 4 6 3.4313 1.2840 0.0005 5 6 4.0585 2.5150 0.0011 6 6 5.5635 2.5937 0.0022 7 8 6.0219 2.9675 -1.2986 8 14 6.2720 0.9317 0.4565 9 6 3.3033 3.6780 0.0016 10 8 3.9207 4.8896 0.0016 11 6 3.0808 6.0457 0.0016 12 6 3.9351 7.2872 0.0022 13 8 5.1441 7.1914 0.0022 14 7 3.3555 8.5041 0.0018 15 6 4.1860 9.7110 0.0030 16 1 5.1734 9.5449 0.4339 17 6 4.2194 10.4370 -1.3522 18 6 2.9845 11.2218 -0.8702 19 1 2.0374 10.7382 -1.1094 20 6 3.0099 12.7020 -1.2564 21 16 2.2812 12.9094 -2.9046 22 6 2.4000 14.6983 -3.1812 23 6 3.4698 10.9509 0.5637 24 6 1.9180 3.6055 0.0073 25 6 1.2909 2.3750 0.0009 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3634 0.5139 0.8899 29 1 4.0194 0.3782 0.0001 30 1 5.8878 3.3380 0.7295 31 1 5.6914 3.8246 -1.6009 32 1 7.7557 0.9877 0.4302 33 1 5.8028 0.5316 1.8074 34 1 2.4516 6.0377 -0.8883 35 1 2.4515 6.0376 0.8916 36 1 2.3886 8.5806 0.0015 37 1 5.1039 11.0582 -1.4929 38 1 4.0195 9.7845 -2.2021 39 1 2.4352 13.2769 -0.5302 40 1 4.0403 13.0571 -1.2673 41 1 1.8409 15.2236 -2.4068 42 1 3.4459 15.0030 -3.1441 43 1 1.9842 14.9433 -4.1585 44 1 2.6651 10.7131 1.2594 45 1 4.1497 11.7117 0.9471 46 1 1.3299 4.5113 0.0125 47 1 0.2124 2.3185 0.0012 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:37:48 Heat of formation + Delta-G solvation = -84.145588 kcal Electronic energy + Delta-G solvation = -28624.428002 eV Core-core repulsion = 24481.073229 eV Total energy + Delta-G solvation = -4143.354773 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.138 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.87502 -41.32854 -40.20825 -39.30951 -37.94805 -36.81992 -34.81820 -32.77787 -31.41530 -30.71042 -29.89338 -29.12938 -28.06245 -26.91003 -26.48252 -24.39370 -23.51221 -22.39417 -21.96843 -20.46342 -19.52467 -18.82453 -18.52551 -17.90372 -17.57570 -17.55289 -17.27380 -16.96259 -16.69195 -16.20648 -16.03610 -15.97000 -15.60707 -15.35091 -15.27228 -15.15638 -15.07758 -14.52241 -14.36236 -14.13535 -14.08056 -13.99136 -13.74171 -13.62010 -13.48151 -13.45037 -13.07408 -12.99743 -12.63262 -12.28066 -12.23401 -11.85734 -11.68059 -11.51505 -11.39589 -11.14937 -11.01517 -10.98806 -10.91707 -10.24120 -10.06245 -8.81376 -8.71089 -4.73333 0.08416 0.35684 0.61967 1.33416 1.39574 1.54768 1.55108 1.79846 2.15440 2.26242 2.46808 2.57087 3.23429 3.35962 3.36205 3.54439 3.56146 3.61624 3.65983 3.73890 3.83153 3.97005 4.08701 4.09052 4.11297 4.12412 4.13242 4.15440 4.18265 4.22104 4.34702 4.35884 4.44382 4.53363 4.54291 4.56692 4.64415 4.67036 4.70028 4.85515 4.90575 4.98070 5.03652 5.11691 5.19399 5.38661 5.42449 6.06414 6.25660 6.39117 6.75747 7.00842 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.314 6.314 3 C 0.104 3.896 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.099 3.901 10 O -0.290 6.290 11 C 0.041 3.959 12 C 0.519 3.481 13 O -0.509 6.509 14 N -0.711 5.711 15 C 0.121 3.879 16 H 0.107 0.893 17 C -0.142 4.142 18 C -0.095 4.095 19 H 0.099 0.901 20 C -0.076 4.076 21 S -0.265 6.265 22 C -0.122 4.122 23 C -0.135 4.135 24 C -0.165 4.165 25 C -0.165 4.165 26 H 0.056 0.944 27 H 0.103 0.897 28 H 0.055 0.945 29 H 0.147 0.853 30 H 0.078 0.922 31 H 0.369 0.631 32 H -0.254 1.254 33 H -0.251 1.251 34 H 0.095 0.905 35 H 0.094 0.906 36 H 0.403 0.597 37 H 0.095 0.905 38 H 0.076 0.924 39 H 0.083 0.917 40 H 0.084 0.916 41 H 0.076 0.924 42 H 0.077 0.923 43 H 0.102 0.898 44 H 0.078 0.922 45 H 0.100 0.900 46 H 0.133 0.867 47 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.135 3.189 0.993 7.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.058 3.942 4 C -0.121 4.121 5 C -0.099 4.099 6 C -0.180 4.180 7 O -0.339 6.339 8 Si 0.642 3.358 9 C 0.054 3.946 10 O -0.203 6.203 11 C -0.037 4.037 12 C 0.304 3.696 13 O -0.382 6.382 14 N -0.364 5.364 15 C 0.016 3.984 16 H 0.125 0.875 17 C -0.181 4.181 18 C -0.115 4.115 19 H 0.117 0.883 20 C -0.224 4.224 21 S -0.039 6.039 22 C -0.291 4.291 23 C -0.174 4.174 24 C -0.184 4.184 25 C -0.184 4.184 26 H 0.075 0.925 27 H 0.121 0.879 28 H 0.074 0.926 29 H 0.164 0.836 30 H 0.096 0.904 31 H 0.216 0.784 32 H -0.179 1.179 33 H -0.175 1.175 34 H 0.113 0.887 35 H 0.112 0.888 36 H 0.237 0.763 37 H 0.113 0.887 38 H 0.095 0.905 39 H 0.102 0.898 40 H 0.102 0.898 41 H 0.095 0.905 42 H 0.096 0.904 43 H 0.121 0.879 44 H 0.097 0.903 45 H 0.118 0.882 46 H 0.151 0.849 47 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.560 1.206 0.905 5.761 hybrid contribution -1.145 3.186 1.072 3.551 sum -6.706 4.392 1.977 8.256 Atomic orbital electron populations 1.23100 0.78065 1.04397 1.01322 1.86111 1.21541 1.26182 1.88877 1.18811 0.91910 0.84574 0.98869 1.20058 0.91637 0.96772 1.03624 1.19482 0.96617 0.90026 1.03812 1.25372 0.91473 1.12360 0.88842 1.86707 1.73748 1.41916 1.31497 0.93015 0.79760 0.80263 0.82794 1.18654 0.90826 0.84567 1.00513 1.86111 1.33865 1.11068 1.89282 1.22440 0.93137 0.84085 1.04083 1.20020 0.88842 0.84097 0.76680 1.90792 1.14128 1.86449 1.46837 1.45472 1.10214 1.04632 1.76088 1.21833 0.95840 0.83184 0.97543 0.87505 1.23552 0.98081 0.98777 0.97656 1.22439 0.99651 0.93011 0.96381 0.88298 1.23425 1.03382 0.99966 0.95632 1.87023 1.81983 1.10718 1.24152 1.23397 1.05281 0.94264 1.06134 1.23392 1.00852 0.97170 0.96023 1.21019 0.92820 0.98703 1.05841 1.21085 1.00331 0.91505 1.05460 0.92537 0.87860 0.92627 0.83632 0.90417 0.78362 1.17904 1.17532 0.88676 0.88837 0.76267 0.88663 0.90488 0.89826 0.89777 0.90455 0.90405 0.87944 0.90293 0.88164 0.84911 0.84694 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.43 10.50 -19.66 -0.21 -0.63 16 3 C 0.10 0.17 6.69 -39.24 -0.26 -0.09 16 4 C -0.10 -0.20 8.59 -39.45 -0.34 -0.54 16 5 C -0.10 -0.26 5.28 -104.49 -0.55 -0.81 16 6 C -0.07 -0.23 2.33 36.01 0.08 -0.15 16 7 O -0.53 -2.17 12.65 -35.23 -0.45 -2.62 16 8 Si 0.74 1.43 30.17 -169.99 -5.13 -3.70 16 9 C 0.10 0.19 6.62 -39.24 -0.26 -0.07 16 10 O -0.29 -0.62 8.56 -39.60 -0.34 -0.96 16 11 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 12 C 0.52 0.40 7.91 -10.98 -0.09 0.32 16 13 O -0.51 -2.89 16.12 -14.35 -0.23 -3.12 16 14 N -0.71 1.53 5.26 -53.01 -0.28 1.25 16 15 C 0.12 -0.19 4.29 -67.12 -0.29 -0.47 16 16 H 0.11 0.04 7.50 -51.93 -0.39 -0.35 16 17 C -0.14 0.21 7.45 -25.77 -0.19 0.02 16 18 C -0.10 0.26 3.55 -89.66 -0.32 -0.06 16 19 H 0.10 -0.26 8.13 -51.93 -0.42 -0.68 16 20 C -0.08 0.15 5.78 37.15 0.21 0.37 16 21 S -0.26 -0.08 22.37 -107.50 -2.40 -2.48 16 22 C -0.12 0.20 10.76 101.05 1.09 1.28 16 23 C -0.13 0.47 7.38 -25.91 -0.19 0.28 16 24 C -0.17 0.02 9.03 -39.45 -0.36 -0.34 16 25 C -0.17 -0.01 9.03 -39.45 -0.36 -0.36 16 26 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 27 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 28 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 29 H 0.15 0.05 5.13 -52.49 -0.27 -0.22 16 30 H 0.08 0.31 7.82 -51.93 -0.41 -0.10 16 31 H 0.37 1.01 8.60 45.56 0.39 1.40 16 32 H -0.25 -1.18 7.11 56.52 0.40 -0.78 16 33 H -0.25 -0.77 7.11 56.52 0.40 -0.36 16 34 H 0.10 -0.37 7.67 -51.93 -0.40 -0.77 16 35 H 0.09 -0.36 7.65 -51.93 -0.40 -0.75 16 36 H 0.40 -2.05 8.70 -40.82 -0.36 -2.40 16 37 H 0.09 -0.15 7.90 -51.93 -0.41 -0.56 16 38 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 39 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 40 H 0.08 -0.20 7.85 -51.92 -0.41 -0.60 16 41 H 0.08 -0.18 8.14 -51.92 -0.42 -0.60 16 42 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 43 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 44 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 45 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 46 H 0.13 -0.41 6.29 -52.49 -0.33 -0.74 16 47 H 0.14 -0.30 6.29 -52.49 -0.33 -0.63 16 LS Contribution 399.51 15.07 6.02 6.02 Total: 0.00 -8.98 399.51 -10.75 -19.73 By element: Atomic # 1 Polarization: -6.81 SS G_CDS: -7.10 Total: -13.91 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: -0.64 Total: 0.43 kcal Atomic # 7 Polarization: 1.53 SS G_CDS: -0.28 Total: 1.25 kcal Atomic # 8 Polarization: -6.11 SS G_CDS: -1.22 Total: -7.34 kcal Atomic # 14 Polarization: 1.43 SS G_CDS: -5.13 Total: -3.70 kcal Atomic # 16 Polarization: -0.08 SS G_CDS: -2.40 Total: -2.48 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -8.98 -10.75 -19.73 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.419 kcal (2) G-P(sol) polarization free energy of solvation -8.979 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.398 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.748 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.727 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.146 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds