Wall clock time and date at job start Sun Mar 7 2021 06:37:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35902 * 117.00364 * 2 1 4 4 C 1.38614 * 120.02940 * 180.27132 * 3 2 1 5 5 C 1.38658 * 119.88788 * 180.21085 * 4 3 2 6 6 O 1.35896 * 120.02379 * 179.79388 * 5 4 3 7 7 C 1.42900 * 116.99944 * 359.71933 * 6 5 4 8 8 C 1.50706 * 109.46630 * 180.02562 * 7 6 5 9 9 O 1.21275 * 120.00404 * 0.02562 * 8 7 6 10 10 N 1.34779 * 119.99413 * 180.02562 * 8 7 6 11 11 C 1.46506 * 119.99461 * 180.02562 * 10 8 7 12 12 H 1.08993 * 112.85039 * 23.80077 * 11 10 8 13 13 C 1.53781 * 113.61193 * 155.00132 * 11 10 8 14 14 C 1.53777 * 87.08184 * 89.11272 * 13 11 10 15 15 H 1.08999 * 113.61931 * 270.88291 * 14 13 11 16 16 C 1.53006 * 113.61288 * 140.06125 * 14 13 11 17 17 S 1.81397 * 109.47077 * 174.99915 * 16 14 13 18 18 C 1.81402 * 103.00176 * 180.02562 * 17 16 14 19 19 C 1.53779 * 87.08235 * 25.43165 * 14 13 11 20 20 C 1.38757 * 119.94333 * 359.51252 * 5 4 3 21 21 C 1.50703 * 119.96801 * 180.27742 * 20 5 4 22 22 O 1.42894 * 109.46895 * 285.00198 * 21 20 5 23 23 Si 1.86301 * 109.46821 * 164.99891 * 21 20 5 24 24 C 1.38189 * 120.05550 * 0.25959 * 20 5 4 25 25 C 1.38157 * 120.11424 * 359.97113 * 24 20 5 26 26 H 1.08999 * 109.47487 * 300.00653 * 1 2 3 27 27 H 1.09005 * 109.46487 * 60.00006 * 1 2 3 28 28 H 1.08991 * 109.47017 * 179.97438 * 1 2 3 29 29 H 1.07998 * 120.05553 * 359.97438 * 4 3 2 30 30 H 1.08994 * 109.47379 * 60.00471 * 7 6 5 31 31 H 1.08994 * 109.47216 * 300.00101 * 7 6 5 32 32 H 0.96995 * 120.00725 * 0.02562 * 10 8 7 33 33 H 1.09005 * 113.61150 * 203.66119 * 13 11 10 34 34 H 1.09003 * 113.61408 * 334.56369 * 13 11 10 35 35 H 1.08992 * 109.47205 * 294.99977 * 16 14 13 36 36 H 1.09004 * 109.46648 * 55.00370 * 16 14 13 37 37 H 1.09005 * 109.46634 * 299.99936 * 18 17 16 38 38 H 1.08998 * 109.46672 * 59.99820 * 18 17 16 39 39 H 1.09001 * 109.47190 * 180.02562 * 18 17 16 40 40 H 1.09003 * 113.61721 * 220.01560 * 19 14 13 41 41 H 1.09001 * 113.61225 * 89.11601 * 19 14 13 42 42 H 1.08998 * 109.46700 * 45.00229 * 21 20 5 43 43 H 0.96701 * 114.00359 * 299.99580 * 22 21 20 44 44 H 1.48503 * 109.99705 * 180.02562 * 23 21 20 45 45 H 1.48499 * 110.00032 * 301.32302 * 23 21 20 46 46 H 1.08000 * 119.94271 * 179.97438 * 24 20 5 47 47 H 1.07993 * 119.97327 * 180.02562 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4302 1.2840 -0.0057 5 6 4.0568 2.5210 -0.0012 6 8 5.4137 2.5959 -0.0026 7 6 6.1316 1.3604 -0.0024 8 6 7.6125 1.6400 -0.0033 9 8 8.0136 2.7846 -0.0036 10 7 8.4912 0.6181 -0.0038 11 6 9.9308 0.8899 -0.0042 12 1 10.1763 1.8713 0.4013 13 6 10.7732 -0.2508 0.5907 14 6 10.8305 -0.8426 -0.8275 15 1 10.0055 -1.5184 -1.0523 16 6 12.1957 -1.4297 -1.1919 17 16 12.0973 -2.2238 -2.8198 18 6 13.7815 -2.8489 -3.0714 19 6 10.6143 0.5881 -1.3483 20 6 3.2971 3.6821 -0.0014 21 6 3.9775 5.0268 -0.0029 22 8 4.5049 5.2952 1.2978 23 14 2.7436 6.3465 -0.4573 24 6 1.9173 3.6065 -0.0005 25 6 1.2906 2.3752 -0.0001 26 1 -0.3634 0.5139 0.8899 27 1 -0.3632 0.5139 -0.8901 28 1 -0.3633 -1.0276 -0.0005 29 1 4.0197 0.3791 -0.0097 30 1 5.8692 0.7875 -0.8917 31 1 5.8708 0.7887 0.8882 32 1 8.1706 -0.2974 -0.0040 33 1 11.7431 0.0736 0.9680 34 1 10.2276 -0.8718 1.3012 35 1 12.9381 -0.6322 -1.2210 36 1 12.4848 -2.1683 -0.4442 37 1 14.4846 -2.0161 -3.0534 38 1 14.0306 -3.5520 -2.2766 39 1 13.8415 -3.3537 -4.0356 40 1 9.9405 0.6444 -2.2032 41 1 11.5407 1.1418 -1.5011 42 1 4.7893 5.0224 -0.7303 43 1 3.8369 5.3142 1.9969 44 1 3.4023 7.6775 -0.4629 45 1 2.1643 6.0614 -1.7946 46 1 1.3278 4.5114 -0.0001 47 1 0.2122 2.3188 0.0002 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_4974312.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:37:51 Heat of formation + Delta-G solvation = -80.823484 kcal Electronic energy + Delta-G solvation = -28668.303285 eV Core-core repulsion = 24525.092569 eV Total energy + Delta-G solvation = -4143.210716 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.138 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.83557 -41.27545 -40.17294 -39.27929 -38.11257 -36.82070 -34.72600 -32.26741 -31.57411 -30.83288 -29.86891 -29.05257 -28.47795 -26.84615 -26.04384 -24.33722 -23.45042 -22.45905 -21.88988 -20.39770 -19.91607 -18.58000 -17.99074 -17.80602 -17.50495 -17.37025 -17.18354 -16.81183 -16.74699 -16.44681 -16.15466 -15.90713 -15.73521 -15.35818 -15.16079 -15.09743 -15.02256 -14.60367 -14.40895 -14.33459 -14.03864 -13.79564 -13.71551 -13.50309 -13.43188 -13.39451 -13.17265 -12.94048 -12.53835 -12.21665 -12.14410 -12.02466 -11.72891 -11.64773 -11.61538 -11.33599 -10.95106 -10.87284 -10.20616 -10.15330 -9.68606 -9.06651 -8.67725 -4.95719 0.22050 0.33806 0.65499 1.40649 1.42411 1.50406 1.58635 1.74074 2.10040 2.15698 2.53958 2.59960 3.30585 3.41639 3.47570 3.61119 3.64923 3.69109 3.71596 3.80934 3.89528 3.93496 4.02886 4.04354 4.13024 4.14208 4.14799 4.18923 4.25789 4.27366 4.38097 4.40820 4.41250 4.52702 4.59476 4.62241 4.72195 4.73838 4.74570 4.91738 4.96026 5.03877 5.04622 5.23354 5.28295 5.44622 5.49065 6.11799 6.30086 6.38572 6.82353 7.11634 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.248 4.248 5 C 0.192 3.808 6 O -0.272 6.272 7 C 0.037 3.963 8 C 0.519 3.481 9 O -0.505 6.505 10 N -0.711 5.711 11 C 0.122 3.878 12 H 0.108 0.892 13 C -0.135 4.135 14 C -0.096 4.096 15 H 0.099 0.901 16 C -0.075 4.075 17 S -0.265 6.265 18 C -0.122 4.122 19 C -0.143 4.143 20 C -0.185 4.185 21 C -0.051 4.051 22 O -0.533 6.533 23 Si 0.679 3.321 24 C -0.034 4.034 25 C -0.240 4.240 26 H 0.060 0.940 27 H 0.059 0.941 28 H 0.103 0.897 29 H 0.138 0.862 30 H 0.096 0.904 31 H 0.097 0.903 32 H 0.403 0.597 33 H 0.100 0.900 34 H 0.079 0.921 35 H 0.083 0.917 36 H 0.083 0.917 37 H 0.077 0.923 38 H 0.076 0.924 39 H 0.102 0.898 40 H 0.076 0.924 41 H 0.095 0.905 42 H 0.113 0.887 43 H 0.373 0.627 44 H -0.254 1.254 45 H -0.257 1.257 46 H 0.139 0.861 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.886 -5.099 2.491 6.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.267 4.267 5 C 0.145 3.855 6 O -0.183 6.183 7 C -0.042 4.042 8 C 0.304 3.696 9 O -0.378 6.378 10 N -0.365 5.365 11 C 0.016 3.984 12 H 0.126 0.874 13 C -0.174 4.174 14 C -0.115 4.115 15 H 0.117 0.883 16 C -0.224 4.224 17 S -0.039 6.039 18 C -0.291 4.291 19 C -0.181 4.181 20 C -0.187 4.187 21 C -0.162 4.162 22 O -0.337 6.337 23 Si 0.581 3.419 24 C -0.052 4.052 25 C -0.258 4.258 26 H 0.078 0.922 27 H 0.077 0.923 28 H 0.121 0.879 29 H 0.156 0.844 30 H 0.114 0.886 31 H 0.115 0.885 32 H 0.237 0.763 33 H 0.118 0.882 34 H 0.097 0.903 35 H 0.102 0.898 36 H 0.102 0.898 37 H 0.096 0.904 38 H 0.096 0.904 39 H 0.120 0.880 40 H 0.095 0.905 41 H 0.113 0.887 42 H 0.131 0.869 43 H 0.219 0.781 44 H -0.179 1.179 45 H -0.182 1.182 46 H 0.156 0.844 47 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -2.884 -3.699 0.882 4.773 hybrid contribution 1.113 -1.213 0.477 1.713 sum -1.771 -4.912 1.359 5.396 Atomic orbital electron populations 1.23148 0.77589 1.04428 1.01787 1.86078 1.22031 1.26661 1.88004 1.18683 0.91435 0.84406 0.92683 1.20398 0.92973 0.97333 1.15990 1.18406 0.81979 0.92458 0.92646 1.86262 1.14757 1.29587 1.87727 1.22509 0.90229 0.87134 1.04289 1.19996 0.87299 0.85611 0.76741 1.90804 1.79657 1.20801 1.46565 1.45464 1.05649 1.09132 1.76247 1.21823 0.78959 1.00252 0.97339 0.87405 1.23402 1.01005 0.96993 0.96044 1.22393 0.95969 0.96580 0.96577 0.88302 1.23427 1.00837 1.02261 0.95829 1.87026 1.17547 1.73257 1.26088 1.23396 0.95677 1.03883 1.06127 1.23512 1.01585 0.95300 0.97743 1.19603 0.92841 0.94514 1.11703 1.24853 1.04497 0.97572 0.89294 1.86598 1.37525 1.93557 1.16022 0.95357 0.83102 0.78077 0.85338 1.20589 0.92309 0.97349 0.94912 1.21131 1.00507 0.91749 1.12446 0.92164 0.92257 0.87895 0.84416 0.88634 0.88503 0.76275 0.88201 0.90255 0.89792 0.89814 0.90427 0.90449 0.87970 0.90549 0.88698 0.86921 0.78119 1.17891 1.18205 0.84367 0.84640 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.30 10.49 -19.43 -0.20 -0.51 16 3 C 0.17 0.23 6.68 -39.24 -0.26 -0.04 16 4 C -0.25 -0.36 8.97 -39.29 -0.35 -0.71 16 5 C 0.19 0.52 6.66 -39.23 -0.26 0.26 16 6 O -0.27 -1.06 8.99 -39.32 -0.35 -1.41 16 7 C 0.04 0.01 5.22 36.01 0.19 0.19 16 8 C 0.52 1.14 7.91 -10.98 -0.09 1.05 16 9 O -0.51 -3.69 16.10 -14.35 -0.23 -3.92 16 10 N -0.71 0.75 5.26 -53.01 -0.28 0.48 16 11 C 0.12 -0.08 4.32 -67.12 -0.29 -0.37 16 12 H 0.11 0.14 7.46 -51.93 -0.39 -0.25 16 13 C -0.13 0.37 7.39 -25.92 -0.19 0.18 16 14 C -0.10 0.19 3.53 -89.81 -0.32 -0.12 16 15 H 0.10 -0.19 8.13 -51.93 -0.42 -0.61 16 16 C -0.08 0.11 5.78 37.16 0.21 0.33 16 17 S -0.27 -0.20 22.37 -107.50 -2.40 -2.61 16 18 C -0.12 0.15 10.76 101.05 1.09 1.24 16 19 C -0.14 0.11 7.43 -25.92 -0.19 -0.08 16 20 C -0.19 -0.37 5.27 -104.45 -0.55 -0.92 16 21 C -0.05 -0.13 2.37 36.01 0.09 -0.04 16 22 O -0.53 -1.70 12.88 -35.23 -0.45 -2.15 16 23 Si 0.68 0.28 29.91 -169.99 -5.08 -4.81 16 24 C -0.03 0.00 8.65 -39.63 -0.34 -0.34 16 25 C -0.24 0.01 9.04 -39.40 -0.36 -0.34 16 26 H 0.06 -0.21 7.66 -51.93 -0.40 -0.60 16 27 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 28 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 29 H 0.14 -0.06 6.30 -52.49 -0.33 -0.39 16 30 H 0.10 -0.21 7.65 -51.93 -0.40 -0.61 16 31 H 0.10 -0.22 7.67 -51.93 -0.40 -0.62 16 32 H 0.40 -1.62 8.70 -40.82 -0.36 -1.97 16 33 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 34 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 35 H 0.08 -0.15 7.85 -51.93 -0.41 -0.56 16 36 H 0.08 -0.18 8.14 -51.92 -0.42 -0.60 16 37 H 0.08 -0.14 8.14 -51.92 -0.42 -0.56 16 38 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.10 -0.16 8.14 -51.92 -0.42 -0.58 16 40 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 41 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 42 H 0.11 0.51 7.82 -51.93 -0.41 0.10 16 43 H 0.37 -0.52 8.70 45.56 0.40 -0.12 16 44 H -0.25 -0.97 7.11 56.52 0.40 -0.57 16 45 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 46 H 0.14 -0.39 5.12 -52.49 -0.27 -0.66 16 47 H 0.14 -0.32 6.29 -52.49 -0.33 -0.65 16 LS Contribution 400.03 15.07 6.03 6.03 Total: 0.00 -10.80 400.03 -10.71 -21.51 By element: Atomic # 1 Polarization: -6.73 SS G_CDS: -7.09 Total: -13.82 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: -0.64 Total: 1.21 kcal Atomic # 7 Polarization: 0.75 SS G_CDS: -0.28 Total: 0.48 kcal Atomic # 8 Polarization: -6.74 SS G_CDS: -1.24 Total: -7.98 kcal Atomic # 14 Polarization: 0.28 SS G_CDS: -5.08 Total: -4.81 kcal Atomic # 16 Polarization: -0.20 SS G_CDS: -2.40 Total: -2.61 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -10.80 -10.71 -21.51 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_4974312.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.314 kcal (2) G-P(sol) polarization free energy of solvation -10.800 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.113 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.710 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.510 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.823 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds