Wall clock time and date at job start Sun Mar 7 2021 06:38:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35963 * 116.99972 * 2 1 4 4 C 1.39448 * 120.12034 * 179.97438 * 3 2 1 5 5 O 1.34776 * 133.24474 * 359.97438 * 4 3 2 6 6 C 1.34930 * 110.84474 * 179.97438 * 5 4 3 7 7 C 1.46992 * 125.13865 * 180.02562 * 6 5 4 8 8 O 1.21648 * 119.99848 * 179.97438 * 7 6 5 9 9 N 1.34776 * 119.99989 * 359.97438 * 7 6 5 10 10 C 1.46506 * 119.99797 * 180.02562 * 9 7 6 11 11 H 1.08997 * 112.85094 * 23.80475 * 10 9 7 12 12 C 1.53779 * 113.61482 * 155.00064 * 10 9 7 13 13 C 1.53781 * 87.08093 * 89.11350 * 12 10 9 14 14 H 1.09000 * 113.61842 * 270.88070 * 13 12 10 15 15 C 1.52997 * 113.61270 * 139.98052 * 13 12 10 16 16 S 1.81405 * 109.47385 * 175.00169 * 15 13 12 17 17 C 1.81401 * 103.00333 * 180.02562 * 16 15 13 18 18 C 1.53776 * 113.61196 * 252.49689 * 10 9 7 19 19 C 1.35810 * 109.72032 * 0.02562 * 6 5 4 20 20 C 1.40612 * 119.13666 * 179.97438 * 4 3 2 21 21 C 1.39773 * 120.12230 * 0.02562 * 20 4 3 22 22 C 1.50699 * 120.09583 * 179.97438 * 21 20 4 23 23 O 1.42895 * 109.47158 * 284.99856 * 22 21 20 24 24 Si 1.86300 * 109.46944 * 165.00377 * 22 21 20 25 25 C 1.36633 * 119.81043 * 0.25209 * 21 20 4 26 26 C 1.38253 * 120.12262 * 359.97438 * 3 2 1 27 27 H 1.08998 * 109.47409 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.46793 * 299.99627 * 1 2 3 29 29 H 1.09003 * 109.47361 * 59.99231 * 1 2 3 30 30 H 0.96996 * 120.00153 * 359.97438 * 9 7 6 31 31 H 1.09001 * 113.61464 * 203.66296 * 12 10 9 32 32 H 1.09006 * 113.61260 * 334.48760 * 12 10 9 33 33 H 1.09001 * 109.47130 * 295.00282 * 15 13 12 34 34 H 1.09001 * 109.47552 * 55.00126 * 15 13 12 35 35 H 1.08997 * 109.46702 * 59.99612 * 17 16 15 36 36 H 1.08993 * 109.46908 * 179.97438 * 17 16 15 37 37 H 1.08998 * 109.46961 * 300.00061 * 17 16 15 38 38 H 1.09001 * 113.61588 * 25.43594 * 18 10 9 39 39 H 1.09009 * 113.61544 * 156.33474 * 18 10 9 40 40 H 1.07994 * 126.95610 * 180.02562 * 19 6 5 41 41 H 1.09000 * 109.47247 * 45.00309 * 22 21 20 42 42 H 0.96698 * 114.00355 * 300.00487 * 23 22 21 43 43 H 1.48506 * 110.00048 * 180.02562 * 24 22 21 44 44 H 1.48502 * 109.99996 * 301.31619 * 24 22 21 45 45 H 1.07998 * 119.75597 * 179.72238 * 25 21 20 46 46 H 1.08005 * 119.66429 * 0.02562 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4386 1.2874 0.0005 5 8 4.4141 0.3573 0.0016 6 6 5.6317 0.9386 0.0011 7 6 6.9131 0.2184 0.0014 8 8 7.9595 0.8387 0.0005 9 7 6.9286 -1.1293 0.0027 10 6 8.2057 -1.8471 0.0036 11 1 9.0249 -1.2530 0.4086 12 6 8.1169 -3.2616 0.6004 13 6 7.7805 -3.7535 -0.8172 14 1 6.7140 -3.7407 -1.0423 15 6 8.4498 -5.0805 -1.1804 16 16 7.8640 -5.6278 -2.8077 17 6 8.7536 -7.1888 -3.0579 18 6 8.5352 -2.5196 -1.3395 19 6 5.4945 2.2898 0.0004 20 6 4.0554 2.5510 0.0000 21 6 3.2766 3.7116 -0.0006 22 6 3.9382 5.0656 -0.0006 23 8 4.4600 5.3408 1.3009 24 14 2.6866 6.3683 -0.4558 25 6 1.9136 3.6151 0.0047 26 6 1.2957 2.3725 -0.0005 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8901 29 1 -0.3634 0.5140 -0.8899 30 1 6.0942 -1.6239 0.0038 31 1 9.0681 -3.6365 0.9784 32 1 7.3004 -3.3848 1.3119 33 1 9.5311 -4.9459 -1.2099 34 1 8.1974 -5.8316 -0.4320 35 1 8.4931 -7.8868 -2.2624 36 1 8.4744 -7.6156 -4.0212 37 1 9.8273 -7.0019 -3.0403 38 1 8.0556 -2.0442 -2.1951 39 1 9.6008 -2.6917 -1.4919 40 1 6.2874 3.0229 -0.0005 41 1 4.7508 5.0729 -0.7270 42 1 3.7911 5.3501 1.9991 43 1 3.3268 7.7083 -0.4600 44 1 2.1130 6.0759 -1.7940 45 1 1.3128 4.5125 0.0088 46 1 0.2173 2.3120 -0.0005 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_6672420.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:38:09 Heat of formation + Delta-G solvation = -39.604854 kcal Electronic energy + Delta-G solvation = -29901.463274 eV Core-core repulsion = 25659.125269 eV Total energy + Delta-G solvation = -4242.338004 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.122 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -43.65786 -41.35031 -40.63690 -39.39917 -39.07075 -37.00042 -34.78392 -33.55293 -31.94066 -31.22254 -30.48477 -29.72886 -28.66279 -26.83259 -26.37857 -25.43705 -23.93806 -23.62684 -22.10502 -21.66624 -20.36088 -19.81050 -18.98951 -18.57207 -17.76689 -17.65391 -17.44337 -17.00258 -16.91664 -16.64854 -16.26565 -16.22227 -15.93862 -15.79135 -15.47507 -15.27814 -15.10027 -14.71880 -14.61473 -14.43391 -14.33714 -14.09335 -13.98226 -13.68844 -13.58241 -13.43013 -13.41448 -13.34611 -12.93963 -12.55177 -12.37825 -12.20736 -12.07935 -11.89645 -11.60808 -11.40226 -11.32622 -10.93217 -10.92011 -10.45492 -10.22879 -9.76294 -8.98337 -8.64923 -5.08011 -0.58313 0.12243 0.67947 0.71811 1.22776 1.30579 1.61320 1.62253 1.91996 1.96353 2.05384 2.05880 2.41214 3.21955 3.32280 3.42479 3.43861 3.53275 3.62826 3.63322 3.70205 3.83687 3.87235 4.01207 4.08968 4.09608 4.15378 4.16324 4.18571 4.21111 4.29793 4.42355 4.44588 4.46244 4.47037 4.60860 4.63744 4.70720 4.74565 4.83686 4.88509 4.93114 4.97554 5.04371 5.07191 5.23340 5.30801 5.44020 5.64592 6.15956 6.33849 6.56807 6.94189 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.150 3.850 4 C 0.046 3.954 5 O -0.174 6.174 6 C -0.024 4.024 7 C 0.606 3.394 8 O -0.507 6.507 9 N -0.700 5.700 10 C 0.118 3.882 11 H 0.111 0.889 12 C -0.134 4.134 13 C -0.097 4.097 14 H 0.100 0.900 15 C -0.075 4.075 16 S -0.264 6.264 17 C -0.122 4.122 18 C -0.142 4.142 19 C -0.103 4.103 20 C -0.082 4.082 21 C -0.099 4.099 22 C -0.066 4.066 23 O -0.535 6.535 24 Si 0.686 3.314 25 C -0.088 4.088 26 C -0.178 4.178 27 H 0.105 0.895 28 H 0.061 0.939 29 H 0.060 0.940 30 H 0.409 0.591 31 H 0.101 0.899 32 H 0.080 0.920 33 H 0.084 0.916 34 H 0.083 0.917 35 H 0.076 0.924 36 H 0.101 0.899 37 H 0.077 0.923 38 H 0.077 0.923 39 H 0.096 0.904 40 H 0.174 0.826 41 H 0.114 0.886 42 H 0.379 0.621 43 H -0.252 1.252 44 H -0.255 1.255 45 H 0.141 0.859 46 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.297 -2.402 2.474 6.321 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.002 4.002 5 O -0.075 6.075 6 C -0.074 4.074 7 C 0.391 3.609 8 O -0.383 6.383 9 N -0.351 5.351 10 C 0.012 3.988 11 H 0.129 0.871 12 C -0.174 4.174 13 C -0.116 4.116 14 H 0.118 0.882 15 C -0.223 4.223 16 S -0.038 6.038 17 C -0.291 4.291 18 C -0.181 4.181 19 C -0.124 4.124 20 C -0.083 4.083 21 C -0.099 4.099 22 C -0.177 4.177 23 O -0.341 6.341 24 Si 0.587 3.413 25 C -0.105 4.105 26 C -0.197 4.197 27 H 0.124 0.876 28 H 0.080 0.920 29 H 0.079 0.921 30 H 0.245 0.755 31 H 0.120 0.880 32 H 0.098 0.902 33 H 0.102 0.898 34 H 0.102 0.898 35 H 0.095 0.905 36 H 0.120 0.880 37 H 0.096 0.904 38 H 0.095 0.905 39 H 0.115 0.885 40 H 0.192 0.808 41 H 0.131 0.869 42 H 0.226 0.774 43 H -0.177 1.177 44 H -0.179 1.179 45 H 0.158 0.842 46 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -4.866 -1.343 0.868 5.122 hybrid contribution 0.607 -1.295 0.509 1.518 sum -4.258 -2.638 1.378 5.195 Atomic orbital electron populations 1.23194 0.77292 1.04781 1.01800 1.86176 1.22179 1.25654 1.88359 1.17734 0.86482 0.85909 0.99430 1.18786 0.87475 0.86954 1.06998 1.84052 1.12648 1.34717 1.76111 1.21937 0.83862 0.92576 1.09032 1.16588 0.85446 0.82046 0.76801 1.90922 1.30313 1.67398 1.49687 1.45561 1.09810 1.05574 1.74108 1.21911 0.86465 0.92699 0.97680 0.87118 1.23401 1.03640 0.94241 0.96148 1.22402 1.00566 0.92122 0.96527 0.88226 1.23421 1.02886 1.00123 0.95865 1.87062 1.62301 1.28379 1.26099 1.23392 1.02723 0.96868 1.06119 1.23514 1.01485 0.95465 0.97605 1.22751 0.94794 0.94313 1.00539 1.19407 0.92622 0.92085 1.04235 1.19489 0.92922 0.94451 1.03084 1.25066 1.05484 0.97777 0.89335 1.86541 1.38154 1.93349 1.16029 0.95012 0.83019 0.77808 0.85457 1.20393 0.93081 0.97264 0.99782 1.20980 1.00432 0.90514 1.07766 0.87641 0.92026 0.92104 0.75534 0.88049 0.90167 0.89763 0.89796 0.90467 0.87987 0.90438 0.90451 0.88512 0.80828 0.86864 0.77423 1.17686 1.17943 0.84181 0.83358 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.31 -0.44 10.50 -19.62 -0.21 -0.65 16 3 C 0.15 0.25 6.70 -39.13 -0.26 -0.01 16 4 C 0.05 0.15 7.35 -38.24 -0.28 -0.13 16 5 O -0.17 -0.62 10.28 2.65 0.03 -0.59 16 6 C -0.02 -0.08 7.07 -36.91 -0.26 -0.34 16 7 C 0.61 2.10 7.80 -12.71 -0.10 2.01 16 8 O -0.51 -3.18 16.42 5.23 0.09 -3.10 16 9 N -0.70 -0.54 5.26 -54.23 -0.29 -0.82 16 10 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 11 H 0.11 0.09 7.46 -51.93 -0.39 -0.29 16 12 C -0.13 0.30 7.39 -25.92 -0.19 0.11 16 13 C -0.10 0.13 3.53 -89.81 -0.32 -0.19 16 14 H 0.10 -0.07 8.13 -51.93 -0.42 -0.49 16 15 C -0.07 0.08 5.78 37.16 0.21 0.30 16 16 S -0.26 -0.31 22.37 -107.50 -2.40 -2.72 16 17 C -0.12 0.12 10.76 101.05 1.09 1.21 16 18 C -0.14 0.06 7.43 -25.92 -0.19 -0.13 16 19 C -0.10 -0.35 10.68 -37.23 -0.40 -0.74 16 20 C -0.08 -0.23 6.16 -105.21 -0.65 -0.88 16 21 C -0.10 -0.08 5.26 -104.63 -0.55 -0.63 16 22 C -0.07 -0.01 2.71 36.01 0.10 0.09 16 23 O -0.54 -0.31 12.88 -35.23 -0.45 -0.76 16 24 Si 0.69 -0.91 29.93 -169.99 -5.09 -6.00 16 25 C -0.09 0.10 8.62 -39.96 -0.34 -0.24 16 26 C -0.18 0.16 9.03 -39.38 -0.36 -0.20 16 27 H 0.11 -0.42 8.14 -51.93 -0.42 -0.85 16 28 H 0.06 -0.25 7.66 -51.93 -0.40 -0.65 16 29 H 0.06 -0.24 7.66 -51.93 -0.40 -0.63 16 30 H 0.41 -0.25 8.42 -40.82 -0.34 -0.59 16 31 H 0.10 -0.32 8.10 -51.93 -0.42 -0.74 16 32 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 33 H 0.08 -0.14 7.84 -51.92 -0.41 -0.55 16 34 H 0.08 -0.14 8.14 -51.92 -0.42 -0.57 16 35 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 36 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 39 H 0.10 -0.10 7.90 -51.92 -0.41 -0.51 16 40 H 0.17 0.48 8.06 -52.49 -0.42 0.06 16 41 H 0.11 0.10 7.96 -51.93 -0.41 -0.31 16 42 H 0.38 -1.33 8.70 45.56 0.40 -0.93 16 43 H -0.25 -0.52 7.11 56.52 0.40 -0.11 16 44 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 45 H 0.14 -0.59 5.08 -52.49 -0.27 -0.85 16 46 H 0.15 -0.56 6.26 -52.48 -0.33 -0.89 16 LS Contribution 398.46 15.07 6.00 6.00 Total: 0.00 -8.72 398.46 -10.50 -19.22 By element: Atomic # 1 Polarization: -5.04 SS G_CDS: -6.38 Total: -11.41 kcal Atomic # 6 Polarization: 2.63 SS G_CDS: -1.80 Total: 0.83 kcal Atomic # 7 Polarization: -0.54 SS G_CDS: -0.29 Total: -0.82 kcal Atomic # 8 Polarization: -4.55 SS G_CDS: -0.55 Total: -5.09 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.09 Total: -6.00 kcal Atomic # 16 Polarization: -0.31 SS G_CDS: -2.40 Total: -2.72 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -8.72 -10.50 -19.22 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_6672420.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.387 kcal (2) G-P(sol) polarization free energy of solvation -8.720 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.107 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.498 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.218 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.605 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds