Wall clock time and date at job start Sun Mar 7 2021 04:30:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42904 * 113.99859 * 2 1 4 4 C 1.53009 * 109.46811 * 179.97438 * 3 2 1 5 5 H 1.08992 * 112.85226 * 316.19503 * 4 3 2 6 6 C 1.53783 * 113.60794 * 87.50644 * 4 3 2 7 7 C 1.53785 * 87.07903 * 139.97954 * 6 4 3 8 8 H 1.08997 * 113.61053 * 220.01476 * 7 6 4 9 9 N 1.46495 * 113.69265 * 89.12142 * 7 6 4 10 10 C 1.34786 * 119.99900 * 107.46128 * 9 7 6 11 11 O 1.21689 * 120.00036 * 354.90302 * 10 9 7 12 12 C 1.46675 * 119.99918 * 174.89702 * 10 9 7 13 13 C 1.37872 * 126.23494 * 4.96590 * 12 10 9 14 14 C 1.39837 * 107.08388 * 180.02562 * 13 12 10 15 15 C 1.35448 * 107.86651 * 359.97438 * 14 13 12 16 16 C 1.50696 * 125.56488 * 180.02562 * 15 14 13 17 17 O 1.42895 * 109.47475 * 149.97979 * 16 15 14 18 18 Si 1.86306 * 109.47038 * 29.98092 * 16 15 14 19 19 N 1.35533 * 108.87134 * 359.74200 * 15 14 13 20 20 C 1.46495 * 125.67872 * 180.30332 * 19 15 14 21 21 C 1.53783 * 87.08096 * 334.56311 * 7 6 4 22 22 H 1.09003 * 109.46682 * 299.99628 * 1 2 3 23 23 H 1.08999 * 109.47108 * 60.00160 * 1 2 3 24 24 H 1.08998 * 109.47033 * 180.02562 * 1 2 3 25 25 H 1.08999 * 109.47237 * 299.99781 * 3 2 1 26 26 H 1.08999 * 109.47167 * 59.99982 * 3 2 1 27 27 H 1.09008 * 113.61109 * 254.52473 * 6 4 3 28 28 H 1.08999 * 113.61790 * 25.42883 * 6 4 3 29 29 H 0.97003 * 120.00307 * 287.46827 * 9 7 6 30 30 H 1.07998 * 126.45610 * 0.03153 * 13 12 10 31 31 H 1.07999 * 126.06395 * 179.97438 * 14 13 12 32 32 H 1.08996 * 109.47396 * 269.98558 * 16 15 14 33 33 H 0.96696 * 114.00615 * 180.02562 * 17 16 15 34 34 H 1.48499 * 110.00083 * 298.68358 * 18 16 15 35 35 H 1.48504 * 109.99706 * 59.99728 * 18 16 15 36 36 H 1.08996 * 109.47254 * 275.92886 * 20 19 15 37 37 H 1.09000 * 109.47376 * 35.92924 * 20 19 15 38 38 H 1.09005 * 109.47454 * 155.93103 * 20 19 15 39 39 H 1.08999 * 113.61176 * 270.89012 * 21 7 6 40 40 H 1.08997 * 113.69126 * 139.99281 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5355 1.1846 0.0006 5 1 3.8999 0.4287 0.6962 6 6 4.1452 1.0746 -1.4069 7 6 5.2679 1.9992 -0.9072 8 1 5.5798 2.7428 -1.6406 9 7 6.3966 1.2836 -0.3072 10 6 7.5690 1.2002 -0.9668 11 8 7.6631 1.6379 -2.0983 12 6 8.7316 0.5821 -0.3206 13 6 8.7458 -0.0376 0.9110 14 6 10.0536 -0.4799 1.1333 15 6 10.7988 -0.1310 0.0574 16 6 12.2681 -0.4149 -0.1204 17 8 12.5592 -0.5661 -1.5112 18 14 12.7109 -1.9842 0.7808 19 7 10.0060 0.5095 -0.8359 20 6 10.4346 1.0395 -2.1327 21 6 4.2604 2.5354 0.1235 22 1 -0.3633 0.5138 0.8901 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0276 0.0005 25 1 1.6886 1.8464 -0.8900 26 1 1.6886 1.8464 0.8900 27 1 4.4861 0.0701 -1.6577 28 1 3.5272 1.5200 -2.1865 29 1 6.3001 0.8697 0.5648 30 1 7.9052 -0.1586 1.5782 31 1 10.4068 -1.0062 2.0077 32 1 12.8498 0.4131 0.2846 33 1 13.4891 -0.7515 -1.7006 34 1 12.4427 -1.8288 2.2331 35 1 11.9244 -3.1208 0.2379 36 1 10.8660 2.0310 -1.9953 37 1 11.1815 0.3754 -2.5677 38 1 9.5752 1.1065 -2.7999 39 1 3.6738 3.3801 -0.2379 40 1 4.6929 2.7108 1.1085 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_10803936.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:30:26 Heat of formation + Delta-G solvation = -31.536184 kcal Electronic energy + Delta-G solvation = -22079.823625 eV Core-core repulsion = 18670.381720 eV Total energy + Delta-G solvation = -3409.441905 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.54057 -41.08066 -39.38932 -38.16684 -37.77060 -34.72814 -33.53842 -31.53299 -29.70199 -27.43403 -27.20230 -26.77727 -26.41910 -23.76188 -23.04307 -21.60924 -20.36451 -20.16066 -18.74062 -18.42504 -17.46557 -17.17987 -16.93403 -16.73669 -16.55543 -16.24176 -15.86764 -15.56523 -15.25528 -14.85680 -14.82688 -14.37127 -14.25277 -13.85137 -13.75202 -13.63071 -13.51394 -13.12474 -12.99691 -12.87711 -12.59764 -12.41429 -11.88602 -11.87581 -11.59962 -11.32522 -10.95536 -10.63172 -10.60339 -10.09005 -9.71519 -9.05322 -5.03977 0.43742 1.11984 1.54572 1.67477 1.75339 2.04098 2.38976 2.40576 2.73672 3.05283 3.40741 3.54702 3.63782 3.74567 3.82275 3.90975 4.06004 4.27673 4.28936 4.32123 4.35620 4.38896 4.49814 4.51742 4.54188 4.61613 4.63505 4.68018 4.75006 4.77434 4.95291 5.00902 5.03909 5.05144 5.11575 5.17369 5.55436 5.72753 6.01708 6.18295 6.19257 6.42149 6.49193 7.20661 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.110 4.110 5 H 0.099 0.901 6 C -0.143 4.143 7 C 0.123 3.877 8 H 0.106 0.894 9 N -0.702 5.702 10 C 0.595 3.405 11 O -0.543 6.543 12 C -0.052 4.052 13 C -0.134 4.134 14 C -0.213 4.213 15 C 0.061 3.939 16 C -0.053 4.053 17 O -0.550 6.550 18 Si 0.716 3.284 19 N -0.385 5.385 20 C 0.055 3.945 21 C -0.137 4.137 22 H 0.041 0.959 23 H 0.041 0.959 24 H 0.086 0.914 25 H 0.052 0.948 26 H 0.051 0.949 27 H 0.075 0.925 28 H 0.093 0.907 29 H 0.404 0.596 30 H 0.147 0.853 31 H 0.145 0.855 32 H 0.081 0.919 33 H 0.387 0.613 34 H -0.253 1.253 35 H -0.253 1.253 36 H 0.070 0.930 37 H 0.109 0.891 38 H 0.103 0.897 39 H 0.099 0.901 40 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.150 0.562 2.517 3.358 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.007 4.007 4 C -0.129 4.129 5 H 0.117 0.883 6 C -0.182 4.182 7 C 0.018 3.982 8 H 0.124 0.876 9 N -0.353 5.353 10 C 0.384 3.616 11 O -0.421 6.421 12 C -0.167 4.167 13 C -0.160 4.160 14 C -0.236 4.236 15 C -0.058 4.058 16 C -0.162 4.162 17 O -0.358 6.358 18 Si 0.615 3.385 19 N -0.056 5.056 20 C -0.085 4.085 21 C -0.176 4.176 22 H 0.060 0.940 23 H 0.060 0.940 24 H 0.105 0.895 25 H 0.070 0.930 26 H 0.069 0.931 27 H 0.093 0.907 28 H 0.111 0.889 29 H 0.239 0.761 30 H 0.165 0.835 31 H 0.162 0.838 32 H 0.099 0.901 33 H 0.236 0.764 34 H -0.178 1.178 35 H -0.177 1.177 36 H 0.089 0.911 37 H 0.127 0.873 38 H 0.121 0.879 39 H 0.118 0.882 40 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 1.489 0.361 1.770 2.341 hybrid contribution -0.758 0.562 0.442 1.042 sum 0.731 0.924 2.212 2.506 Atomic orbital electron populations 1.22761 0.80841 1.02977 1.00024 1.87896 1.19815 1.27858 1.95411 1.22563 0.92972 0.84901 1.00283 1.22618 0.93209 0.98286 0.98753 0.88295 1.23490 0.96993 1.01131 0.96569 1.21813 0.85046 0.94970 0.96379 0.87592 1.45270 1.10813 1.56591 1.22582 1.16919 0.81758 0.78093 0.84844 1.90783 1.84400 1.49085 1.17873 1.20007 0.86407 1.13055 0.97199 1.21241 0.97721 1.01849 0.95227 1.20519 0.93862 1.09287 0.99960 1.20093 0.92200 1.01688 0.91818 1.24544 0.91513 1.11139 0.89043 1.86372 1.32699 1.94825 1.21923 0.95479 0.89324 0.75370 0.78330 1.43766 1.06337 1.40207 1.15325 1.22623 1.03621 1.00187 0.82075 1.23346 0.96918 0.97192 1.00095 0.94023 0.94000 0.89502 0.92984 0.93107 0.90661 0.88893 0.76055 0.83492 0.83766 0.90118 0.76371 1.17790 1.17689 0.91094 0.87284 0.87850 0.88242 0.90234 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 11.01 101.05 1.11 1.11 16 2 O -0.39 -0.89 10.70 -35.23 -0.38 -1.27 16 3 C 0.07 0.00 5.78 37.16 0.21 0.21 16 4 C -0.11 0.06 3.89 -89.80 -0.35 -0.28 16 5 H 0.10 -0.03 8.14 -51.93 -0.42 -0.45 16 6 C -0.14 -0.06 7.43 -25.92 -0.19 -0.26 16 7 C 0.12 0.06 4.29 -67.12 -0.29 -0.23 16 8 H 0.11 0.19 7.53 -51.93 -0.39 -0.20 16 9 N -0.70 -0.74 5.25 -54.32 -0.29 -1.02 16 10 C 0.60 2.53 7.77 -12.85 -0.10 2.43 16 11 O -0.54 -3.83 14.18 5.20 0.07 -3.76 16 12 C -0.05 -0.22 6.89 -81.98 -0.56 -0.78 16 13 C -0.13 -0.33 10.36 -39.12 -0.41 -0.73 16 14 C -0.21 -0.61 9.37 -39.98 -0.37 -0.98 16 15 C 0.06 0.19 6.18 -81.96 -0.51 -0.31 16 16 C -0.05 0.02 2.98 36.00 0.11 0.13 16 17 O -0.55 0.54 9.79 -35.23 -0.35 0.19 16 18 Si 0.72 -1.12 31.22 -169.99 -5.31 -6.43 16 19 N -0.38 -1.65 3.16 -115.63 -0.37 -2.01 16 20 C 0.06 0.17 10.30 59.84 0.62 0.78 16 21 C -0.14 0.23 7.39 -25.92 -0.19 0.04 16 22 H 0.04 -0.04 8.14 -51.93 -0.42 -0.47 16 23 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 24 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 25 H 0.05 -0.04 7.84 -51.93 -0.41 -0.45 16 26 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 27 H 0.07 0.15 8.14 -51.92 -0.42 -0.27 16 28 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 29 H 0.40 -0.47 7.60 -40.82 -0.31 -0.78 16 30 H 0.15 -0.09 7.45 -52.49 -0.39 -0.48 16 31 H 0.14 0.21 6.69 -52.49 -0.35 -0.14 16 32 H 0.08 -0.16 7.96 -51.93 -0.41 -0.58 16 33 H 0.39 -2.37 8.74 45.56 0.40 -1.97 16 34 H -0.25 -0.14 6.87 56.52 0.39 0.25 16 35 H -0.25 -0.63 7.11 56.52 0.40 -0.22 16 36 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 37 H 0.11 0.23 5.48 -51.93 -0.28 -0.05 16 38 H 0.10 0.46 5.93 -51.93 -0.31 0.15 16 39 H 0.10 -0.26 8.10 -51.93 -0.42 -0.68 16 40 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 LS Contribution 328.29 15.07 4.95 4.95 Total: 0.00 -8.85 328.29 -8.46 -17.31 By element: Atomic # 1 Polarization: -3.19 SS G_CDS: -5.88 Total: -9.07 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -0.92 Total: 1.12 kcal Atomic # 7 Polarization: -2.38 SS G_CDS: -0.65 Total: -3.03 kcal Atomic # 8 Polarization: -4.19 SS G_CDS: -0.65 Total: -4.84 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: -5.31 Total: -6.43 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -8.85 -8.46 -17.31 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_10803936.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.228 kcal (2) G-P(sol) polarization free energy of solvation -8.846 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.074 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.462 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.308 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.536 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds