Wall clock time and date at job start Sun Mar 7 2021 04:30:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42904 * 113.99935 * 2 1 4 4 C 1.52999 * 109.47219 * 179.97438 * 3 2 1 5 5 H 1.08993 * 112.90825 * 316.25002 * 4 3 2 6 6 C 1.53962 * 113.66529 * 87.55249 * 4 3 2 7 7 C 1.53782 * 87.11063 * 139.88900 * 6 4 3 8 8 H 1.09001 * 113.61250 * 220.08565 * 7 6 4 9 9 N 1.46496 * 113.68971 * 89.19569 * 7 6 4 10 10 C 1.34784 * 119.99758 * 107.45966 * 9 7 6 11 11 O 1.21569 * 120.00008 * 0.02562 * 10 9 7 12 12 C 1.47691 * 119.99833 * 179.97438 * 10 9 7 13 13 C 1.39828 * 120.16241 * 180.02562 * 12 10 9 14 14 F 1.35098 * 120.11240 * 359.97438 * 13 12 10 15 15 C 1.38323 * 119.77464 * 180.02562 * 13 12 10 16 16 C 1.38201 * 120.12022 * 359.97438 * 15 13 12 17 17 C 1.38464 * 120.33715 * 359.97438 * 16 15 13 18 18 C 1.50700 * 119.88827 * 179.97438 * 17 16 15 19 19 O 1.42904 * 109.46874 * 120.00669 * 18 17 16 20 20 Si 1.86299 * 109.47223 * 0.02562 * 18 17 16 21 21 C 1.37851 * 120.21801 * 359.72707 * 17 16 15 22 22 C 1.53781 * 87.08260 * 334.63747 * 7 6 4 23 23 H 1.08999 * 109.47092 * 179.97438 * 1 2 3 24 24 H 1.09007 * 109.47542 * 300.00106 * 1 2 3 25 25 H 1.09005 * 109.47713 * 59.99858 * 1 2 3 26 26 H 1.09002 * 109.47483 * 59.99664 * 3 2 1 27 27 H 1.09004 * 109.46995 * 299.99840 * 3 2 1 28 28 H 1.08997 * 113.53543 * 25.33574 * 6 4 3 29 29 H 1.08994 * 113.66446 * 254.45777 * 6 4 3 30 30 H 0.97001 * 120.00688 * 287.46664 * 9 7 6 31 31 H 1.08000 * 119.93968 * 179.97438 * 15 13 12 32 32 H 1.08004 * 119.83241 * 179.97438 * 16 15 13 33 33 H 1.08994 * 109.47447 * 240.00163 * 18 17 16 34 34 H 0.96701 * 113.99977 * 180.02562 * 19 18 17 35 35 H 1.48499 * 110.00180 * 298.67983 * 20 18 17 36 36 H 1.48502 * 109.99923 * 59.99784 * 20 18 17 37 37 H 1.08001 * 120.06064 * 180.29949 * 21 17 16 38 38 H 1.09002 * 113.61445 * 139.98212 * 22 7 6 39 39 H 1.09002 * 113.61408 * 270.79943 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1847 0.0006 5 1 3.9008 0.4284 0.6952 6 6 4.1473 1.0757 -1.4079 7 6 5.2684 2.0019 -0.9079 8 1 5.5789 2.7466 -1.6408 9 7 6.3985 1.2878 -0.3087 10 6 7.5709 1.2070 -0.9687 11 8 7.6907 1.7271 -2.0610 12 6 8.7104 0.4875 -0.3644 13 6 9.9284 0.4021 -1.0458 14 9 10.0674 0.9771 -2.2604 15 6 10.9902 -0.2742 -0.4726 16 6 10.8481 -0.8629 0.7696 17 6 9.6445 -0.7803 1.4491 18 6 9.5005 -1.4266 2.8029 19 8 9.1717 -0.4306 3.7735 20 14 11.1059 -2.2460 3.2738 21 6 8.5791 -0.1046 0.8936 22 6 4.2602 2.5355 0.1235 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3634 0.5139 0.8900 25 1 -0.3635 0.5139 -0.8900 26 1 1.6885 1.8465 0.8899 27 1 1.6885 1.8464 -0.8900 28 1 3.5282 1.5205 -2.1870 29 1 4.4898 0.0720 -1.6596 30 1 6.3031 0.8730 0.5629 31 1 11.9321 -0.3422 -0.9967 32 1 11.6801 -1.3902 1.2127 33 1 8.7078 -2.1738 2.7664 34 1 9.0639 -0.7759 4.6703 35 1 11.4433 -3.3055 2.2896 36 1 12.1944 -1.2372 3.3273 37 1 7.6429 -0.0376 1.4279 38 1 4.6940 2.7103 1.1081 39 1 3.6731 3.3804 -0.2365 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_12335834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:30:37 Heat of formation + Delta-G solvation = -96.040033 kcal Electronic energy + Delta-G solvation = -23683.544126 eV Core-core repulsion = 19894.588539 eV Total energy + Delta-G solvation = -3788.955588 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -49.85276 -41.57621 -40.52744 -39.38929 -38.19700 -37.59751 -34.63974 -32.72770 -32.39041 -29.69586 -27.07947 -26.72141 -26.69142 -25.58788 -23.86414 -22.88680 -21.61148 -20.33852 -19.13206 -18.68115 -18.31313 -17.74453 -17.43200 -17.03142 -16.76278 -16.73366 -16.53883 -16.20087 -15.87297 -15.65974 -15.59343 -15.17360 -14.62214 -14.43023 -14.27023 -14.16847 -13.91136 -13.81177 -13.53147 -13.34850 -12.90103 -12.60846 -12.55087 -12.43151 -12.08549 -11.90648 -11.61990 -11.33444 -11.00000 -10.62232 -10.54209 -10.42755 -10.07952 -9.81204 -5.11640 -0.53378 -0.10688 1.10463 1.49484 1.64634 1.80907 1.94521 2.45386 2.71763 3.00247 3.09545 3.34084 3.37374 3.48268 3.52661 3.58912 3.77605 3.85558 3.90590 4.01219 4.15533 4.25493 4.30788 4.37365 4.41730 4.50208 4.52881 4.62598 4.63588 4.66901 4.69334 4.74945 4.81409 4.82452 5.00694 5.02055 5.03985 5.10933 5.49885 5.54308 6.17368 6.37577 6.43361 7.13337 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.110 4.110 5 H 0.098 0.902 6 C -0.143 4.143 7 C 0.120 3.880 8 H 0.108 0.892 9 N -0.707 5.707 10 C 0.563 3.437 11 O -0.518 6.518 12 C -0.173 4.173 13 C 0.167 3.833 14 F -0.109 7.109 15 C -0.155 4.155 16 C -0.067 4.067 17 C -0.095 4.095 18 C -0.071 4.071 19 O -0.546 6.546 20 Si 0.684 3.316 21 C -0.027 4.027 22 C -0.137 4.137 23 H 0.087 0.913 24 H 0.041 0.959 25 H 0.041 0.959 26 H 0.051 0.949 27 H 0.052 0.948 28 H 0.093 0.907 29 H 0.074 0.926 30 H 0.401 0.599 31 H 0.150 0.850 32 H 0.133 0.867 33 H 0.080 0.920 34 H 0.386 0.614 35 H -0.252 1.252 36 H -0.248 1.248 37 H 0.141 0.859 38 H 0.079 0.921 39 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.283 -2.971 7.092 8.021 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.007 4.007 4 C -0.128 4.128 5 H 0.116 0.884 6 C -0.182 4.182 7 C 0.014 3.986 8 H 0.126 0.874 9 N -0.359 5.359 10 C 0.350 3.650 11 O -0.393 6.393 12 C -0.177 4.177 13 C 0.147 3.853 14 F -0.087 7.087 15 C -0.174 4.174 16 C -0.085 4.085 17 C -0.095 4.095 18 C -0.182 4.182 19 O -0.352 6.352 20 Si 0.585 3.415 21 C -0.045 4.045 22 C -0.175 4.175 23 H 0.105 0.895 24 H 0.060 0.940 25 H 0.060 0.940 26 H 0.069 0.931 27 H 0.070 0.930 28 H 0.112 0.888 29 H 0.093 0.907 30 H 0.237 0.763 31 H 0.168 0.832 32 H 0.150 0.850 33 H 0.098 0.902 34 H 0.234 0.766 35 H -0.177 1.177 36 H -0.172 1.172 37 H 0.159 0.841 38 H 0.097 0.903 39 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -1.227 -2.510 5.468 6.140 hybrid contribution -0.647 0.259 -0.129 0.709 sum -1.874 -2.252 5.338 6.089 Atomic orbital electron populations 1.22761 0.80821 1.02975 1.00048 1.87889 1.19831 1.27862 1.95417 1.22557 0.92925 0.84902 1.00329 1.22641 0.93231 0.98271 0.98700 0.88365 1.23521 0.96979 1.01053 0.96601 1.21843 0.85053 0.95144 0.96536 0.87409 1.45515 1.11227 1.56700 1.22462 1.17920 0.82206 0.79897 0.84978 1.90871 1.82884 1.45866 1.19713 1.20060 0.94430 1.06046 0.97185 1.17694 0.92989 0.93252 0.81386 1.91631 1.95912 1.81277 1.39909 1.21106 0.99274 1.00240 0.96733 1.20950 0.96351 0.97031 0.94147 1.19311 0.93786 1.00895 0.95534 1.24644 1.11215 0.94563 0.87765 1.86475 1.93525 1.34873 1.20356 0.95035 0.76117 0.80831 0.89561 1.20996 0.99066 0.92685 0.91802 1.23341 0.96922 0.97210 1.00071 0.89498 0.94006 0.94001 0.93076 0.92956 0.88837 0.90683 0.76300 0.83234 0.84960 0.90191 0.76623 1.17694 1.17239 0.84146 0.90259 0.88213 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.10 16 2 O -0.39 -0.71 10.70 -35.23 -0.38 -1.09 16 3 C 0.07 -0.03 5.78 37.16 0.21 0.19 16 4 C -0.11 0.11 3.90 -89.71 -0.35 -0.24 16 5 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 6 C -0.14 -0.02 7.44 -25.82 -0.19 -0.21 16 7 C 0.12 0.04 4.32 -67.12 -0.29 -0.25 16 8 H 0.11 0.21 7.46 -51.93 -0.39 -0.17 16 9 N -0.71 -0.48 5.22 -54.01 -0.28 -0.76 16 10 C 0.56 2.25 7.77 -12.40 -0.10 2.15 16 11 O -0.52 -4.10 14.94 5.31 0.08 -4.02 16 12 C -0.17 -0.48 5.88 -104.91 -0.62 -1.10 16 13 C 0.17 0.61 7.29 -38.96 -0.28 0.33 16 14 F -0.11 -0.66 15.55 2.25 0.04 -0.62 16 15 C -0.15 -0.21 10.01 -39.56 -0.40 -0.61 16 16 C -0.07 -0.05 8.66 -39.51 -0.34 -0.39 16 17 C -0.09 -0.04 5.42 -104.68 -0.57 -0.61 16 18 C -0.07 0.15 2.81 36.01 0.10 0.26 16 19 O -0.55 1.12 12.73 -35.23 -0.45 0.67 16 20 Si 0.68 -1.89 29.77 -169.99 -5.06 -6.95 16 21 C -0.03 -0.01 9.09 -39.19 -0.36 -0.37 16 22 C -0.14 0.25 7.38 -25.92 -0.19 0.06 16 23 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 24 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 25 H 0.04 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 27 H 0.05 -0.05 7.85 -51.93 -0.41 -0.46 16 28 H 0.09 -0.03 7.90 -51.93 -0.41 -0.44 16 29 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 30 H 0.40 -0.74 6.74 -40.82 -0.28 -1.01 16 31 H 0.15 -0.10 8.06 -52.49 -0.42 -0.52 16 32 H 0.13 -0.06 4.86 -52.48 -0.25 -0.31 16 33 H 0.08 -0.32 7.96 -51.93 -0.41 -0.73 16 34 H 0.39 -2.63 8.74 45.56 0.40 -2.24 16 35 H -0.25 0.10 7.11 56.52 0.40 0.50 16 36 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 37 H 0.14 -0.28 6.41 -52.49 -0.34 -0.62 16 38 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.10 -0.27 8.10 -51.93 -0.42 -0.69 16 LS Contribution 330.96 15.07 4.99 4.99 Total: 0.00 -8.89 330.96 -8.41 -17.30 By element: Atomic # 1 Polarization: -4.73 SS G_CDS: -5.09 Total: -9.82 kcal Atomic # 6 Polarization: 2.56 SS G_CDS: -2.25 Total: 0.31 kcal Atomic # 7 Polarization: -0.48 SS G_CDS: -0.28 Total: -0.76 kcal Atomic # 8 Polarization: -3.69 SS G_CDS: -0.75 Total: -4.44 kcal Atomic # 9 Polarization: -0.66 SS G_CDS: 0.04 Total: -0.62 kcal Atomic # 14 Polarization: -1.89 SS G_CDS: -5.06 Total: -6.95 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -8.89 -8.41 -17.30 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_12335834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.744 kcal (2) G-P(sol) polarization free energy of solvation -8.888 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.632 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.408 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.296 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.040 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds