Wall clock time and date at job start Sun Mar 7 2021 04:32:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.42903 * 114.00039 * 2 1 4 4 C 1.52998 * 109.47421 * 180.02562 * 3 2 1 5 5 H 1.08999 * 112.84921 * 43.79696 * 4 3 2 6 6 C 1.53785 * 113.61656 * 174.99911 * 4 3 2 7 7 C 1.53779 * 87.08180 * 139.97574 * 6 4 3 8 8 H 1.09000 * 113.61811 * 219.93046 * 7 6 4 9 9 N 1.46500 * 113.61359 * 89.11759 * 7 6 4 10 10 C 1.34771 * 120.00252 * 156.52855 * 9 7 6 11 11 O 1.21284 * 120.00113 * 0.02562 * 10 9 7 12 12 C 1.50703 * 120.00056 * 179.97438 * 10 9 7 13 13 C 1.50699 * 109.47030 * 180.02562 * 12 10 9 14 14 C 1.34855 * 125.88781 * 274.99714 * 13 12 10 15 15 C 1.40891 * 107.41598 * 180.02562 * 14 13 12 16 16 C 1.34854 * 107.41757 * 0.02562 * 15 14 13 17 17 C 1.50699 * 125.89093 * 179.97438 * 16 15 14 18 18 O 1.42904 * 109.47047 * 120.02186 * 17 16 15 19 19 Si 1.86308 * 109.46963 * 0.02733 * 17 16 15 20 20 N 1.36335 * 108.22050 * 359.97438 * 16 15 14 21 21 C 1.53786 * 87.17583 * 334.52576 * 7 6 4 22 22 H 1.09000 * 109.47336 * 179.97438 * 1 2 3 23 23 H 1.08999 * 109.47427 * 300.00079 * 1 2 3 24 24 H 1.09006 * 109.47491 * 60.00498 * 1 2 3 25 25 H 1.09004 * 109.47154 * 59.99563 * 3 2 1 26 26 H 1.09001 * 109.46907 * 299.99605 * 3 2 1 27 27 H 1.09003 * 113.60959 * 25.42723 * 6 4 3 28 28 H 1.09000 * 113.61158 * 254.53014 * 6 4 3 29 29 H 0.97004 * 120.00018 * 336.52394 * 9 7 6 30 30 H 1.08992 * 109.47358 * 59.99934 * 12 10 9 31 31 H 1.09007 * 109.47321 * 299.99775 * 12 10 9 32 32 H 1.08003 * 126.29002 * 0.03575 * 14 13 12 33 33 H 1.07999 * 126.29269 * 180.26121 * 15 14 13 34 34 H 1.08994 * 109.47193 * 240.02777 * 17 16 15 35 35 H 0.96702 * 113.99769 * 300.00531 * 18 17 16 36 36 H 1.48498 * 110.00161 * 58.67755 * 19 17 16 37 37 H 1.48498 * 109.99965 * 179.97438 * 19 17 16 38 38 H 0.96994 * 125.64064 * 179.97438 * 20 16 15 39 39 H 1.09001 * 113.61528 * 140.02258 * 21 7 6 40 40 H 1.08994 * 113.61522 * 270.92550 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1847 -0.0006 5 1 3.8998 0.4287 -0.6961 6 6 4.2603 2.5355 -0.1235 7 6 5.2677 1.9994 0.9072 8 1 5.5809 2.7435 1.6396 9 7 6.3955 1.2821 0.3074 10 6 7.5584 1.1719 0.9796 11 8 7.6711 1.6661 2.0814 12 6 8.7183 0.4335 0.3627 13 6 9.8889 0.4546 1.3115 14 6 10.8009 1.4420 1.4198 15 6 11.7176 1.0615 2.4198 16 6 11.3312 -0.1442 2.8840 17 6 12.0206 -0.9374 3.9641 18 8 11.1151 -1.1528 5.0485 19 14 13.5070 0.0056 4.5743 20 7 10.2092 -0.5218 2.2077 21 6 4.1463 1.0746 1.4093 22 1 -0.3634 -1.0277 -0.0005 23 1 -0.3634 0.5138 0.8899 24 1 -0.3634 0.5138 -0.8901 25 1 1.6885 1.8464 0.8900 26 1 1.6886 1.8463 -0.8900 27 1 3.6736 3.3802 0.2377 28 1 4.6940 2.7102 -1.1081 29 1 6.3052 0.8864 -0.5737 30 1 8.9999 0.9160 -0.5731 31 1 8.4288 -0.5990 0.1664 32 1 10.8242 2.3565 0.8457 33 1 12.5706 1.6324 2.7558 34 1 12.3402 -1.8984 3.5612 35 1 10.7890 -0.3389 5.4562 36 1 13.0882 1.3310 5.0970 37 1 14.1953 -0.7658 5.6403 38 1 9.7200 -1.3486 2.3415 39 1 4.4882 0.0707 1.6614 40 1 3.5287 1.5206 2.1888 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_14644196.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:32:32 Heat of formation + Delta-G solvation = -42.976099 kcal Electronic energy + Delta-G solvation = -21584.854121 eV Core-core repulsion = 18174.916144 eV Total energy + Delta-G solvation = -3409.937977 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.27663 -41.22853 -39.59481 -38.22731 -37.72110 -34.44503 -33.00078 -31.82932 -30.02132 -29.08664 -27.04597 -26.70869 -25.23301 -23.60585 -22.19205 -21.26220 -20.95069 -20.32944 -18.92964 -18.25519 -17.43737 -17.26380 -16.97988 -16.67434 -16.37598 -16.30738 -16.18874 -15.43199 -15.14895 -14.76699 -14.58221 -14.45238 -14.08753 -14.02223 -13.79184 -13.71964 -13.59511 -13.46606 -12.94140 -12.74820 -12.44887 -12.08982 -11.92741 -11.72311 -11.64523 -11.35498 -10.88421 -10.73582 -10.64585 -10.06789 -9.68881 -8.87846 -4.85627 1.14657 1.35711 1.62719 1.73577 1.90765 2.01443 2.29147 2.52821 2.69390 3.36827 3.41364 3.50583 3.64291 3.73002 3.86700 3.87080 3.95772 4.03669 4.23259 4.28768 4.35153 4.36589 4.47908 4.49209 4.50572 4.60122 4.62384 4.64274 4.72605 4.77328 4.85150 4.97745 4.99749 5.10521 5.34733 5.38279 5.54641 6.07139 6.14939 6.22495 6.43213 6.43673 6.69035 7.22541 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.109 4.109 5 H 0.098 0.902 6 C -0.137 4.137 7 C 0.120 3.880 8 H 0.104 0.896 9 N -0.716 5.716 10 C 0.514 3.486 11 O -0.522 6.522 12 C -0.072 4.072 13 C 0.036 3.964 14 C -0.173 4.173 15 C -0.186 4.186 16 C -0.009 4.009 17 C -0.055 4.055 18 O -0.537 6.537 19 Si 0.715 3.285 20 N -0.535 5.535 21 C -0.143 4.143 22 H 0.087 0.913 23 H 0.041 0.959 24 H 0.041 0.959 25 H 0.052 0.948 26 H 0.051 0.949 27 H 0.098 0.902 28 H 0.079 0.921 29 H 0.402 0.598 30 H 0.118 0.882 31 H 0.100 0.900 32 H 0.136 0.864 33 H 0.142 0.858 34 H 0.114 0.886 35 H 0.380 0.620 36 H -0.257 1.257 37 H -0.258 1.258 38 H 0.412 0.588 39 H 0.072 0.928 40 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.399 0.363 -5.600 5.784 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.008 4.008 4 C -0.128 4.128 5 H 0.117 0.883 6 C -0.175 4.175 7 C 0.015 3.985 8 H 0.122 0.878 9 N -0.368 5.368 10 C 0.299 3.701 11 O -0.396 6.396 12 C -0.112 4.112 13 C -0.077 4.077 14 C -0.198 4.198 15 C -0.211 4.211 16 C -0.122 4.122 17 C -0.165 4.165 18 O -0.344 6.344 19 Si 0.614 3.386 20 N -0.130 5.130 21 C -0.182 4.182 22 H 0.105 0.895 23 H 0.060 0.940 24 H 0.060 0.940 25 H 0.070 0.930 26 H 0.069 0.931 27 H 0.116 0.884 28 H 0.097 0.903 29 H 0.236 0.764 30 H 0.136 0.864 31 H 0.118 0.882 32 H 0.154 0.846 33 H 0.159 0.841 34 H 0.132 0.868 35 H 0.228 0.772 36 H -0.182 1.182 37 H -0.184 1.184 38 H 0.249 0.751 39 H 0.091 0.909 40 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -0.772 0.189 -4.216 4.290 hybrid contribution -1.825 -0.171 0.074 1.834 sum -2.597 0.018 -4.142 4.889 Atomic orbital electron populations 1.22762 0.80802 1.02991 1.00056 1.87886 1.19855 1.27881 1.95418 1.22567 0.93020 0.84894 1.00296 1.22654 0.93155 0.98303 0.98660 0.88343 1.23325 0.97019 0.97123 1.00059 1.21797 0.85362 0.94994 0.96377 0.87794 1.45676 1.12200 1.57481 1.21425 1.20626 0.83278 0.80296 0.85860 1.90769 1.82482 1.46632 1.19712 1.20134 0.90429 1.02390 0.98295 1.19476 0.98949 0.91946 0.97375 1.20590 0.97014 0.99379 1.02775 1.20649 1.02564 0.96069 1.01840 1.20782 0.92582 0.98105 1.00747 1.24787 1.00202 1.05582 0.85911 1.86562 1.63411 1.35910 1.48507 0.94445 0.80298 0.77981 0.85855 1.41789 1.23061 1.18308 1.29851 1.23525 0.97191 1.00971 0.96524 0.89488 0.93992 0.93997 0.93010 0.93100 0.88393 0.90282 0.76388 0.86368 0.88168 0.84567 0.84087 0.86776 0.77229 1.18153 1.18359 0.75106 0.90883 0.89067 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.68 10.70 -35.23 -0.38 -1.06 16 3 C 0.07 -0.04 5.78 37.16 0.21 0.18 16 4 C -0.11 0.15 3.90 -89.66 -0.35 -0.20 16 5 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 6 C -0.14 0.34 7.38 -25.92 -0.19 0.15 16 7 C 0.12 -0.07 4.30 -67.12 -0.29 -0.36 16 8 H 0.10 0.14 7.50 -51.93 -0.39 -0.25 16 9 N -0.72 0.98 5.26 -53.02 -0.28 0.70 16 10 C 0.51 0.56 7.82 -10.99 -0.09 0.48 16 11 O -0.52 -3.09 15.65 5.55 0.09 -3.01 16 12 C -0.07 0.11 6.24 -29.03 -0.18 -0.07 16 13 C 0.04 0.05 5.66 -81.79 -0.46 -0.41 16 14 C -0.17 -0.42 10.77 -39.78 -0.43 -0.85 16 15 C -0.19 -0.40 9.37 -39.78 -0.37 -0.78 16 16 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 17 C -0.06 -0.04 3.08 36.00 0.11 0.07 16 18 O -0.54 -1.30 12.88 -35.23 -0.45 -1.76 16 19 Si 0.71 -0.10 30.58 -169.99 -5.20 -5.30 16 20 N -0.54 -0.79 6.07 -5.44 -0.03 -0.82 16 21 C -0.14 0.05 7.45 -25.77 -0.19 -0.14 16 22 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 23 H 0.04 -0.05 8.14 -51.93 -0.42 -0.48 16 24 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 25 H 0.05 -0.06 7.85 -51.93 -0.41 -0.46 16 26 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 27 H 0.10 -0.30 8.10 -51.93 -0.42 -0.72 16 28 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 29 H 0.40 -1.65 8.70 -40.82 -0.36 -2.01 16 30 H 0.12 -0.46 8.14 -51.93 -0.42 -0.88 16 31 H 0.10 -0.38 8.14 -51.93 -0.42 -0.80 16 32 H 0.14 0.17 8.06 -52.48 -0.42 -0.26 16 33 H 0.14 0.06 6.22 -52.49 -0.33 -0.26 16 34 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 35 H 0.38 0.16 8.70 45.56 0.40 0.55 16 36 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 37 H -0.26 -0.71 7.11 56.52 0.40 -0.31 16 38 H 0.41 -0.02 8.96 -40.82 -0.37 -0.39 16 39 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 40 H 0.09 -0.04 7.90 -51.93 -0.41 -0.45 16 LS Contribution 337.86 15.07 5.09 5.09 Total: 0.00 -9.07 337.86 -8.93 -17.99 By element: Atomic # 1 Polarization: -4.34 SS G_CDS: -6.12 Total: -10.46 kcal Atomic # 6 Polarization: 0.26 SS G_CDS: -1.65 Total: -1.39 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: -0.31 Total: -0.12 kcal Atomic # 8 Polarization: -5.08 SS G_CDS: -0.74 Total: -5.82 kcal Atomic # 14 Polarization: -0.10 SS G_CDS: -5.20 Total: -5.30 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -9.07 -8.93 -17.99 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_14644196.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.983 kcal (2) G-P(sol) polarization free energy of solvation -9.066 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.049 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.928 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.993 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.976 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds