Wall clock time and date at job start Sun Mar 7 2021 04:33:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42891 * 114.00679 * 2 1 4 4 C 1.52999 * 109.47579 * 179.97438 * 3 2 1 5 5 H 1.08998 * 112.84630 * 43.80933 * 4 3 2 6 6 C 1.53785 * 113.61342 * 174.99592 * 4 3 2 7 7 C 1.53788 * 87.07610 * 139.98407 * 6 4 3 8 8 H 1.08997 * 113.61349 * 219.93506 * 7 6 4 9 9 N 1.46504 * 113.61557 * 89.11777 * 7 6 4 10 10 C 1.34770 * 119.99982 * 154.99857 * 9 7 6 11 11 O 1.21611 * 120.00078 * 359.97438 * 10 9 7 12 12 C 1.47384 * 119.99925 * 180.02562 * 10 9 7 13 13 C 1.36415 * 127.19375 * 179.97438 * 12 10 9 14 14 C 1.50703 * 125.79974 * 359.95511 * 13 12 10 15 15 O 1.42904 * 109.47021 * 90.00188 * 14 13 12 16 16 C 1.35894 * 116.99864 * 180.02562 * 15 14 13 17 17 C 1.38735 * 120.05186 * 180.02562 * 16 15 14 18 18 C 1.38147 * 119.94129 * 179.97438 * 17 16 15 19 19 C 1.38267 * 120.05789 * 359.97438 * 18 17 16 20 20 C 1.50699 * 119.94534 * 179.97438 * 19 18 17 21 21 O 1.42895 * 109.47158 * 299.99634 * 20 19 18 22 22 Si 1.86300 * 109.46944 * 180.02562 * 20 19 18 23 23 C 1.38271 * 120.10847 * 0.27231 * 19 18 17 24 24 C 1.38146 * 120.05540 * 359.45178 * 23 19 18 25 25 O 1.33653 * 108.39813 * 180.21817 * 13 12 10 26 26 C 1.34217 * 110.90390 * 359.59392 * 25 13 12 27 27 C 1.34179 * 109.12717 * 0.40849 * 26 25 13 28 28 C 1.53778 * 113.61541 * 272.49916 * 4 3 2 29 29 H 1.09001 * 109.46911 * 59.99939 * 1 2 3 30 30 H 1.09000 * 109.47534 * 179.97438 * 1 2 3 31 31 H 1.09006 * 109.47291 * 300.00356 * 1 2 3 32 32 H 1.09000 * 109.47006 * 59.99228 * 3 2 1 33 33 H 1.08998 * 109.46948 * 300.00110 * 3 2 1 34 34 H 1.08997 * 113.61671 * 25.43864 * 6 4 3 35 35 H 1.09000 * 113.69085 * 254.53790 * 6 4 3 36 36 H 0.97003 * 119.99258 * 334.99945 * 9 7 6 37 37 H 1.08994 * 109.47190 * 330.00449 * 14 13 12 38 38 H 1.08999 * 109.46790 * 209.99506 * 14 13 12 39 39 H 1.07994 * 120.03367 * 359.97438 * 17 16 15 40 40 H 1.07997 * 119.97406 * 180.02562 * 18 17 16 41 41 H 1.09000 * 109.47247 * 60.00087 * 20 19 18 42 42 H 0.96698 * 114.00355 * 300.00487 * 21 20 19 43 43 H 1.48506 * 110.00048 * 180.02562 * 22 20 19 44 44 H 1.48502 * 109.99996 * 301.31619 * 22 20 19 45 45 H 1.08003 * 119.96738 * 179.72707 * 23 19 18 46 46 H 1.08003 * 120.02766 * 180.26922 * 24 23 19 47 47 H 1.08009 * 125.43394 * 180.19093 * 26 25 13 48 48 H 1.07998 * 127.02033 * 179.75622 * 27 26 25 49 49 H 1.08995 * 113.61375 * 105.47085 * 28 4 3 50 50 H 1.08999 * 113.61268 * 334.56079 * 28 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3053 0.0000 4 6 3.5355 1.1844 0.0006 5 1 3.9004 0.4283 -0.6944 6 6 4.2605 2.5351 -0.1222 7 6 5.2673 1.9992 0.9095 8 1 5.5798 2.7435 1.6419 9 7 6.3954 1.2815 0.3107 10 6 7.5675 1.1979 0.9706 11 8 7.6889 1.7185 2.0629 12 6 8.7026 0.4764 0.3679 13 6 9.9460 0.3023 0.9014 14 6 10.4135 0.8235 2.2360 15 8 10.1489 -0.1511 3.2471 16 6 10.5119 0.1644 4.5181 17 6 10.2850 -0.7357 5.5491 18 6 10.6553 -0.4128 6.8403 19 6 11.2521 0.8060 7.1053 20 6 11.6546 1.1558 8.5148 21 8 10.4997 1.1460 9.3563 22 14 12.4244 2.8522 8.5378 23 6 11.4746 1.7068 6.0802 24 6 11.1113 1.3864 4.7865 25 8 10.6809 -0.4039 0.0369 26 6 9.9665 -0.7163 -1.0555 27 6 8.7313 -0.2066 -0.9337 28 6 4.1442 1.0748 1.4086 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3634 0.5139 0.8900 32 1 1.6886 1.8463 0.8899 33 1 1.6887 1.8462 -0.8900 34 1 3.6739 3.3800 0.2383 35 1 4.6954 2.7108 -1.1061 36 1 6.2987 0.8666 -0.5608 37 1 9.8824 1.7455 2.4723 38 1 11.4845 1.0215 2.1937 39 1 9.8193 -1.6879 5.3427 40 1 10.4794 -1.1133 7.6432 41 1 12.3758 0.4242 8.8790 42 1 9.8143 1.7743 9.0909 43 1 12.8262 3.2088 9.9223 44 1 13.6080 2.8850 7.6416 45 1 11.9369 2.6600 6.2905 46 1 11.2893 2.0886 3.9854 47 1 10.3292 -1.2842 -1.8997 48 1 7.9233 -0.2825 -1.6463 49 1 4.4848 0.0704 1.6600 50 1 3.5257 1.5206 2.1875 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16535612_4549634.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:04 Heat of formation + Delta-G solvation = -70.496195 kcal Electronic energy + Delta-G solvation = -33274.623446 eV Core-core repulsion = 28623.111454 eV Total energy + Delta-G solvation = -4651.511992 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -43.73406 -41.33287 -41.25213 -39.65582 -39.21885 -38.20770 -37.18675 -34.77507 -33.79635 -32.83610 -31.99457 -31.39868 -29.76852 -27.95628 -26.98385 -26.63131 -26.18076 -24.96520 -23.83601 -23.41849 -22.45650 -22.23255 -21.06165 -20.19916 -19.52274 -19.22771 -18.27910 -17.58312 -17.34714 -17.23414 -17.13521 -16.98018 -16.83027 -16.69603 -16.40179 -16.26302 -15.96524 -15.80630 -15.78238 -15.52261 -15.02896 -14.72483 -14.62051 -14.35744 -14.26902 -14.20935 -13.87902 -13.73019 -13.59356 -13.54056 -13.44620 -13.10876 -12.83413 -12.38524 -12.25171 -12.11967 -12.07209 -11.81972 -11.75542 -11.58393 -11.29127 -11.18470 -10.98225 -10.58995 -10.42180 -10.15339 -10.07699 -9.83844 -9.25248 -4.99465 -0.05619 0.24994 0.27585 1.01778 1.32897 1.50009 1.62824 1.95538 2.02516 2.08847 2.45467 2.63062 2.79987 3.33039 3.46038 3.54105 3.57593 3.61483 3.67137 3.69402 3.78658 3.83998 3.89802 3.93134 3.96693 4.10405 4.27511 4.34705 4.39762 4.40443 4.44540 4.47637 4.49582 4.55510 4.60286 4.62822 4.64348 4.73618 4.76141 4.79146 4.84402 4.85775 4.93505 5.01246 5.09322 5.12389 5.16961 5.23307 5.25729 5.45625 5.55703 5.67014 5.87218 6.24081 6.24210 6.42261 6.77510 7.08672 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.418 6.418 3 C 0.065 3.935 4 C -0.105 4.105 5 H 0.097 0.903 6 C -0.120 4.120 7 C 0.114 3.886 8 H 0.092 0.908 9 N -0.691 5.691 10 C 0.586 3.414 11 O -0.568 6.568 12 C -0.224 4.224 13 C 0.041 3.959 14 C 0.135 3.865 15 O -0.323 6.323 16 C 0.124 3.876 17 C -0.163 4.163 18 C -0.058 4.058 19 C -0.160 4.160 20 C -0.069 4.069 21 O -0.557 6.557 22 Si 0.774 3.226 23 C -0.076 4.076 24 C -0.205 4.205 25 O -0.178 6.178 26 C -0.012 4.012 27 C -0.197 4.197 28 C -0.146 4.146 29 H 0.051 0.949 30 H 0.090 0.910 31 H 0.047 0.953 32 H 0.057 0.943 33 H 0.062 0.938 34 H 0.112 0.888 35 H 0.092 0.908 36 H 0.414 0.586 37 H 0.110 0.890 38 H 0.100 0.900 39 H 0.132 0.868 40 H 0.138 0.862 41 H 0.107 0.893 42 H 0.394 0.606 43 H -0.298 1.298 44 H -0.283 1.283 45 H 0.151 0.849 46 H 0.149 0.851 47 H 0.252 0.748 48 H 0.191 0.809 49 H 0.054 0.946 50 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.346 3.351 -7.439 8.818 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.338 6.338 3 C -0.011 4.011 4 C -0.123 4.123 5 H 0.115 0.885 6 C -0.157 4.157 7 C 0.009 3.991 8 H 0.110 0.890 9 N -0.342 5.342 10 C 0.375 3.625 11 O -0.449 6.449 12 C -0.228 4.228 13 C -0.012 4.012 14 C 0.061 3.939 15 O -0.238 6.238 16 C 0.079 3.921 17 C -0.182 4.182 18 C -0.076 4.076 19 C -0.161 4.161 20 C -0.179 4.179 21 O -0.365 6.365 22 Si 0.680 3.320 23 C -0.093 4.093 24 C -0.223 4.223 25 O -0.073 6.073 26 C -0.077 4.077 27 C -0.216 4.216 28 C -0.185 4.185 29 H 0.069 0.931 30 H 0.108 0.892 31 H 0.066 0.934 32 H 0.075 0.925 33 H 0.080 0.920 34 H 0.130 0.870 35 H 0.110 0.890 36 H 0.251 0.749 37 H 0.128 0.872 38 H 0.118 0.882 39 H 0.150 0.850 40 H 0.156 0.844 41 H 0.124 0.876 42 H 0.244 0.756 43 H -0.226 1.226 44 H -0.210 1.210 45 H 0.168 0.832 46 H 0.167 0.833 47 H 0.268 0.732 48 H 0.208 0.792 49 H 0.073 0.927 50 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -1.926 3.320 -6.242 7.328 hybrid contribution -0.341 -0.830 -0.479 1.017 sum -2.266 2.490 -6.721 7.517 Atomic orbital electron populations 1.22879 0.79887 1.03514 1.00776 1.87850 1.21066 1.29302 1.95593 1.22683 0.93054 0.84267 1.01081 1.22570 0.93092 0.98981 0.97666 0.88467 1.23278 0.95675 0.96825 0.99962 1.21885 0.85164 0.94836 0.97211 0.88998 1.45336 1.10504 1.55698 1.22649 1.17415 0.82425 0.78703 0.83993 1.90769 1.83701 1.48887 1.21561 1.21369 0.94335 1.08192 0.98933 1.22060 0.90165 0.96733 0.92254 1.21163 1.02443 0.90912 0.79429 1.86050 1.78903 1.44066 1.14767 1.19178 0.94959 0.94460 0.83509 1.20622 1.05658 1.00494 0.91425 1.20928 0.95159 0.96284 0.95250 1.20362 1.03724 0.95780 0.96242 1.25130 0.92855 1.12361 0.87588 1.86450 1.30002 1.66319 1.53720 0.93710 0.82005 0.79032 0.77241 1.21026 0.97613 0.99021 0.91666 1.21422 1.04904 0.96816 0.99156 1.83796 1.41594 1.55659 1.26268 1.24910 0.90961 1.01723 0.90136 1.23250 1.00040 1.01975 0.96349 1.23496 0.97401 0.99995 0.97563 0.93084 0.89195 0.93414 0.92473 0.91965 0.86998 0.88976 0.74861 0.87198 0.88198 0.85050 0.84373 0.87576 0.75565 1.22628 1.21010 0.83216 0.83335 0.73198 0.79187 0.92698 0.88641 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 11.01 113.37 1.25 1.21 16 2 O -0.42 -1.49 10.70 -148.98 -1.59 -3.08 16 3 C 0.07 -0.11 5.78 71.98 0.42 0.30 16 4 C -0.10 0.30 3.89 -10.27 -0.04 0.26 16 5 H 0.10 -0.26 8.14 -2.39 -0.02 -0.28 16 6 C -0.12 0.70 7.39 31.12 0.23 0.93 16 7 C 0.11 -0.04 4.32 45.52 0.20 0.16 16 8 H 0.09 0.29 7.46 -2.39 -0.02 0.27 16 9 N -0.69 -0.08 5.26 -443.33 -2.33 -2.41 16 10 C 0.59 3.86 7.81 86.65 0.68 4.54 16 11 O -0.57 -7.54 14.44 -4.06 -0.06 -7.59 16 12 C -0.22 -0.95 6.31 -18.99 -0.12 -1.07 16 13 C 0.04 0.23 7.00 25.26 0.18 0.41 16 14 C 0.13 0.71 4.74 71.24 0.34 1.05 16 15 O -0.32 -3.23 10.12 -92.36 -0.93 -4.17 16 16 C 0.12 1.01 6.69 22.51 0.15 1.16 16 17 C -0.16 -1.22 9.99 22.37 0.22 -1.00 16 18 C -0.06 -0.30 9.60 22.25 0.21 -0.09 16 19 C -0.16 -0.52 5.39 -19.85 -0.11 -0.63 16 20 C -0.07 -0.11 2.82 71.24 0.20 0.09 16 21 O -0.56 -1.36 12.76 -148.98 -1.90 -3.26 16 22 Si 0.77 -0.52 29.78 68.60 2.04 1.53 16 23 C -0.08 -0.15 8.66 22.26 0.19 0.05 16 24 C -0.20 -0.81 9.04 22.37 0.20 -0.61 16 25 O -0.18 -0.55 10.52 4.44 0.05 -0.51 16 26 C -0.01 0.04 12.03 66.89 0.80 0.85 16 27 C -0.20 0.60 10.60 23.65 0.25 0.85 16 28 C -0.15 -0.06 7.43 31.12 0.23 0.17 16 29 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 30 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 31 H 0.05 -0.14 8.14 -2.38 -0.02 -0.15 16 32 H 0.06 -0.17 7.84 -2.39 -0.02 -0.19 16 33 H 0.06 -0.26 8.14 -2.39 -0.02 -0.28 16 34 H 0.11 -0.89 8.10 -2.39 -0.02 -0.91 16 35 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 36 H 0.41 -2.22 7.87 -92.71 -0.73 -2.95 16 37 H 0.11 0.65 6.01 -2.39 -0.01 0.63 16 38 H 0.10 0.05 7.66 -2.39 -0.02 0.03 16 39 H 0.13 0.85 8.06 -2.91 -0.02 0.83 16 40 H 0.14 0.47 8.06 -2.91 -0.02 0.44 16 41 H 0.11 0.27 7.96 -2.39 -0.02 0.25 16 42 H 0.39 -2.05 8.70 -74.06 -0.64 -2.70 16 43 H -0.30 -1.96 7.11 99.48 0.71 -1.26 16 44 H -0.28 -0.99 7.11 99.48 0.71 -0.28 16 45 H 0.15 -0.47 4.87 -2.91 -0.01 -0.48 16 46 H 0.15 -0.04 6.30 -2.91 -0.02 -0.06 16 47 H 0.25 -3.24 8.06 -2.91 -0.02 -3.27 16 48 H 0.19 -1.91 7.74 -2.91 -0.02 -1.93 16 49 H 0.05 0.25 8.14 -2.39 -0.02 0.23 16 50 H 0.10 -0.03 7.89 -2.39 -0.02 -0.05 16 Total: 0.00 -24.54 417.89 0.41 -24.14 By element: Atomic # 1 Polarization: -12.94 SS G_CDS: -0.35 Total: -13.29 kcal Atomic # 6 Polarization: 3.15 SS G_CDS: 5.49 Total: 8.64 kcal Atomic # 7 Polarization: -0.08 SS G_CDS: -2.33 Total: -2.41 kcal Atomic # 8 Polarization: -14.16 SS G_CDS: -4.44 Total: -18.61 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: 2.04 Total: 1.53 kcal Total: -24.54 0.41 -24.14 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_4549634.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.358 kcal (2) G-P(sol) polarization free energy of solvation -24.545 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.903 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.407 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.138 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.496 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds