Wall clock time and date at job start Sun Mar 7 2021 04:34:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.42902 * 114.00051 * 2 1 4 4 C 1.53001 * 109.47222 * 179.97438 * 3 2 1 5 5 H 1.09004 * 112.85406 * 316.20445 * 4 3 2 6 6 C 1.53787 * 113.61067 * 87.50514 * 4 3 2 7 7 C 1.53781 * 87.07852 * 139.98344 * 6 4 3 8 8 H 1.09010 * 113.68607 * 220.00469 * 7 6 4 9 9 N 1.46498 * 113.61654 * 89.11903 * 7 6 4 10 10 C 1.34781 * 120.00390 * 107.49901 * 9 7 6 11 11 O 1.21554 * 119.99459 * 359.97438 * 10 9 7 12 12 C 1.47844 * 119.99989 * 179.97438 * 10 9 7 13 13 C 1.39549 * 120.14510 * 6.25348 * 12 10 9 14 14 C 1.37983 * 119.85295 * 180.02562 * 13 12 10 15 15 C 1.50697 * 119.92896 * 180.02562 * 14 13 12 16 16 O 1.42893 * 109.47746 * 104.99454 * 15 14 13 17 17 Si 1.86300 * 109.46927 * 344.99249 * 15 14 13 18 18 C 1.38339 * 120.14208 * 359.72094 * 14 13 12 19 19 C 1.50704 * 119.85270 * 180.29986 * 18 14 13 20 20 C 1.38383 * 120.29224 * 0.55586 * 18 14 13 21 21 C 1.37935 * 120.14311 * 359.44651 * 20 18 14 22 22 C 1.50709 * 120.07068 * 180.25464 * 21 20 18 23 23 C 1.53777 * 113.61511 * 184.99909 * 4 3 2 24 24 H 1.09002 * 109.47045 * 300.00273 * 1 2 3 25 25 H 1.09004 * 109.46934 * 59.99776 * 1 2 3 26 26 H 1.08995 * 109.47558 * 179.97438 * 1 2 3 27 27 H 1.09003 * 109.47197 * 60.00705 * 3 2 1 28 28 H 1.09000 * 109.47463 * 300.00246 * 3 2 1 29 29 H 1.08995 * 113.61799 * 25.43284 * 6 4 3 30 30 H 1.09002 * 113.61494 * 254.52693 * 6 4 3 31 31 H 0.96999 * 119.99894 * 287.49839 * 9 7 6 32 32 H 1.07997 * 120.07701 * 359.97438 * 13 12 10 33 33 H 1.09000 * 109.47218 * 224.99978 * 15 14 13 34 34 H 0.96699 * 114.00698 * 179.97438 * 16 15 14 35 35 H 1.48501 * 110.00479 * 298.68502 * 17 15 14 36 36 H 1.48501 * 110.00118 * 60.00770 * 17 15 14 37 37 H 1.08991 * 109.46855 * 270.25637 * 19 18 14 38 38 H 1.09005 * 109.46916 * 30.25684 * 19 18 14 39 39 H 1.09002 * 109.46714 * 150.25379 * 19 18 14 40 40 H 1.07999 * 119.92565 * 179.72429 * 20 18 14 41 41 H 1.08999 * 109.46885 * 96.59302 * 22 21 20 42 42 H 1.09003 * 109.46798 * 216.59108 * 22 21 20 43 43 H 1.09001 * 109.47023 * 336.58706 * 22 21 20 44 44 H 1.09005 * 113.60841 * 105.47545 * 23 4 3 45 45 H 1.08995 * 113.62105 * 334.57179 * 23 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1847 0.0006 5 1 3.8999 0.4286 0.6961 6 6 4.1452 1.0746 -1.4069 7 6 5.2678 1.9992 -0.9072 8 1 5.5810 2.7433 -1.6397 9 7 6.3956 1.2818 -0.3073 10 6 7.5683 1.1980 -0.9663 11 8 7.6900 1.7172 -2.0586 12 6 8.7065 0.4745 -0.3607 13 6 8.5338 -0.2324 0.8300 14 6 9.6004 -0.9051 1.3903 15 6 9.4157 -1.6695 2.6758 16 8 9.3776 -3.0703 2.3959 17 14 7.8168 -1.1534 3.4809 18 6 10.8373 -0.8845 0.7712 19 6 11.9960 -1.6270 1.3853 20 6 11.0167 -0.1807 -0.4067 21 6 9.9587 0.4960 -0.9772 22 6 10.1545 1.2572 -2.2631 23 6 4.2603 2.5353 0.1235 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3634 -1.0276 -0.0005 27 1 1.6887 1.8464 0.8901 28 1 1.6886 1.8465 -0.8899 29 1 3.5273 1.5200 -2.1865 30 1 4.4861 0.0702 -1.6578 31 1 6.2983 0.8672 0.5641 32 1 7.5678 -0.2524 1.3124 33 1 10.2465 -1.4558 3.3482 34 1 9.2610 -3.6250 3.1794 35 1 7.8562 0.2950 3.8061 36 1 6.6761 -1.4397 2.5743 37 1 12.5267 -0.9680 2.0723 38 1 11.6239 -2.4953 1.9291 39 1 12.6754 -1.9549 0.5985 40 1 11.9860 -0.1649 -0.8827 41 1 9.8409 0.6378 -3.1033 42 1 9.5567 2.1685 -2.2404 43 1 11.2073 1.5161 -2.3754 44 1 4.6941 2.7100 1.1081 45 1 3.6739 3.3801 -0.2377 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_9599494.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:34:02 Heat of formation + Delta-G solvation = -60.943134 kcal Electronic energy + Delta-G solvation = -25552.691954 eV Core-core repulsion = 21923.637019 eV Total energy + Delta-G solvation = -3629.054934 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.166 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.78854 -40.72870 -39.44458 -38.24861 -37.59668 -34.87582 -34.40440 -33.12975 -30.01541 -29.16725 -28.45688 -27.00847 -26.68795 -25.50951 -23.95750 -23.61838 -22.49355 -20.90384 -20.25605 -18.70777 -18.49913 -17.45580 -17.39932 -17.01582 -16.78292 -16.40893 -16.32530 -16.03176 -15.99833 -15.24448 -14.97840 -14.88658 -14.75316 -14.55848 -14.28553 -14.03084 -13.88856 -13.73423 -13.52883 -13.39762 -13.01301 -12.93097 -12.84644 -12.67130 -12.53187 -12.40821 -12.04719 -11.91452 -11.89429 -11.61880 -11.34437 -10.64889 -10.59533 -10.38295 -10.10489 -9.89270 -9.57708 -5.09568 -0.20972 0.16937 1.16455 1.51702 1.80231 1.83042 2.02740 2.64116 2.71653 3.28106 3.36351 3.51721 3.55810 3.57956 3.76687 3.78255 3.83183 3.88074 4.09560 4.16635 4.24834 4.29987 4.36291 4.36904 4.49147 4.50249 4.52207 4.54667 4.60468 4.64539 4.65362 4.72616 4.75089 4.76694 4.87790 4.95573 4.99945 5.02253 5.06968 5.10529 5.11999 5.31737 5.47275 5.53654 5.60323 5.81989 6.17337 6.41638 6.54518 7.18785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.391 6.391 3 C 0.070 3.930 4 C -0.112 4.112 5 H 0.096 0.904 6 C -0.143 4.143 7 C 0.120 3.880 8 H 0.109 0.891 9 N -0.713 5.713 10 C 0.564 3.436 11 O -0.523 6.523 12 C -0.146 4.146 13 C -0.079 4.079 14 C -0.093 4.093 15 C -0.067 4.067 16 O -0.542 6.542 17 Si 0.675 3.325 18 C -0.023 4.023 19 C -0.126 4.126 20 C -0.132 4.132 21 C -0.008 4.008 22 C -0.123 4.123 23 C -0.138 4.138 24 H 0.041 0.959 25 H 0.042 0.958 26 H 0.087 0.913 27 H 0.051 0.949 28 H 0.053 0.947 29 H 0.094 0.906 30 H 0.074 0.926 31 H 0.397 0.603 32 H 0.121 0.879 33 H 0.076 0.924 34 H 0.382 0.618 35 H -0.252 1.252 36 H -0.249 1.249 37 H 0.075 0.925 38 H 0.083 0.917 39 H 0.072 0.928 40 H 0.135 0.865 41 H 0.079 0.921 42 H 0.096 0.904 43 H 0.061 0.939 44 H 0.077 0.923 45 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.506 -0.613 5.796 5.850 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.006 4.006 4 C -0.130 4.130 5 H 0.114 0.886 6 C -0.181 4.181 7 C 0.014 3.986 8 H 0.127 0.873 9 N -0.364 5.364 10 C 0.353 3.647 11 O -0.401 6.401 12 C -0.149 4.149 13 C -0.097 4.097 14 C -0.093 4.093 15 C -0.178 4.178 16 O -0.349 6.349 17 Si 0.576 3.424 18 C -0.024 4.024 19 C -0.182 4.182 20 C -0.150 4.150 21 C -0.009 4.009 22 C -0.179 4.179 23 C -0.177 4.177 24 H 0.060 0.940 25 H 0.060 0.940 26 H 0.105 0.895 27 H 0.069 0.931 28 H 0.071 0.929 29 H 0.112 0.888 30 H 0.093 0.907 31 H 0.232 0.768 32 H 0.138 0.862 33 H 0.094 0.906 34 H 0.230 0.770 35 H -0.176 1.176 36 H -0.173 1.173 37 H 0.094 0.906 38 H 0.102 0.898 39 H 0.090 0.910 40 H 0.153 0.847 41 H 0.097 0.903 42 H 0.115 0.885 43 H 0.080 0.920 44 H 0.095 0.905 45 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -0.949 0.352 4.341 4.457 hybrid contribution 0.003 0.027 0.215 0.217 sum -0.946 0.379 4.556 4.669 Atomic orbital electron populations 1.22763 0.80796 1.03002 1.00040 1.87896 1.19857 1.27821 1.95412 1.22550 0.92836 0.84933 1.00325 1.22616 0.93356 0.98231 0.98802 0.88593 1.23486 0.97009 1.01120 0.96518 1.21843 0.85175 0.95082 0.96450 0.87277 1.45627 1.11655 1.56659 1.22465 1.18207 0.82145 0.79487 0.84860 1.90744 1.82371 1.46964 1.19984 1.19575 0.94527 1.03705 0.97138 1.21042 0.97714 0.96536 0.94452 1.19050 0.93455 1.00156 0.96633 1.24586 1.10786 0.85027 0.97376 1.86519 1.96540 1.14816 1.37009 0.95225 0.77117 0.83292 0.86771 1.20013 0.94582 0.94191 0.93570 1.20984 0.95448 1.00373 1.01424 1.21049 0.99204 0.98638 0.96086 1.20105 0.91154 0.93831 0.95779 1.21129 1.02102 1.01471 0.93232 1.23352 0.97041 0.97231 1.00029 0.94010 0.93983 0.89468 0.93101 0.92892 0.88755 0.90692 0.76810 0.86179 0.90644 0.77029 1.17625 1.17338 0.90606 0.89801 0.90953 0.84683 0.90277 0.88547 0.92004 0.90477 0.88098 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 11.01 101.05 1.11 1.11 16 2 O -0.39 -0.97 10.70 -35.23 -0.38 -1.35 16 3 C 0.07 0.02 5.77 37.16 0.21 0.23 16 4 C -0.11 -0.01 3.89 -89.81 -0.35 -0.35 16 5 H 0.10 0.06 8.14 -51.93 -0.42 -0.36 16 6 C -0.14 -0.12 7.43 -25.92 -0.19 -0.32 16 7 C 0.12 0.12 4.32 -67.12 -0.29 -0.17 16 8 H 0.11 0.22 7.46 -51.92 -0.39 -0.17 16 9 N -0.71 -1.38 5.21 -53.96 -0.28 -1.66 16 10 C 0.56 2.42 7.70 -12.33 -0.09 2.32 16 11 O -0.52 -3.42 12.95 5.32 0.07 -3.35 16 12 C -0.15 -0.55 5.87 -104.97 -0.62 -1.17 16 13 C -0.08 -0.22 8.13 -39.19 -0.32 -0.54 16 14 C -0.09 -0.20 5.29 -104.68 -0.55 -0.76 16 15 C -0.07 0.04 1.87 36.00 0.07 0.10 16 16 O -0.54 0.25 11.87 -35.23 -0.42 -0.16 16 17 Si 0.67 -1.07 30.19 -169.99 -5.13 -6.20 16 18 C -0.02 -0.04 5.89 -104.53 -0.62 -0.66 16 19 C -0.13 0.05 9.31 36.01 0.34 0.39 16 20 C -0.13 -0.27 9.31 -39.64 -0.37 -0.64 16 21 C -0.01 -0.03 5.91 -104.22 -0.62 -0.64 16 22 C -0.12 -0.34 8.73 36.01 0.31 -0.03 16 23 C -0.14 0.15 7.39 -25.92 -0.19 -0.04 16 24 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 26 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 27 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 28 H 0.05 -0.03 7.84 -51.93 -0.41 -0.44 16 29 H 0.09 0.01 7.90 -51.93 -0.41 -0.40 16 30 H 0.07 0.18 8.14 -51.93 -0.42 -0.24 16 31 H 0.40 0.21 6.77 -40.82 -0.28 -0.07 16 32 H 0.12 0.19 3.29 -52.49 -0.17 0.01 16 33 H 0.08 -0.17 7.40 -51.93 -0.38 -0.56 16 34 H 0.38 -2.08 8.74 45.56 0.40 -1.68 16 35 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 36 H -0.25 -0.25 6.75 56.52 0.38 0.13 16 37 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 38 H 0.08 -0.03 6.18 -51.93 -0.32 -0.35 16 39 H 0.07 -0.07 8.08 -51.93 -0.42 -0.49 16 40 H 0.14 -0.01 8.06 -52.49 -0.42 -0.43 16 41 H 0.08 0.25 8.14 -51.93 -0.42 -0.17 16 42 H 0.10 0.41 5.86 -51.93 -0.30 0.11 16 43 H 0.06 0.06 8.04 -51.93 -0.42 -0.36 16 44 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 45 H 0.10 -0.23 8.10 -51.93 -0.42 -0.65 16 LS Contribution 359.61 15.07 5.42 5.42 Total: 0.00 -7.45 359.61 -9.85 -17.30 By element: Atomic # 1 Polarization: -1.87 SS G_CDS: -6.97 Total: -8.84 kcal Atomic # 6 Polarization: 1.01 SS G_CDS: -2.16 Total: -1.16 kcal Atomic # 7 Polarization: -1.38 SS G_CDS: -0.28 Total: -1.66 kcal Atomic # 8 Polarization: -4.14 SS G_CDS: -0.73 Total: -4.87 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.13 Total: -6.20 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -7.45 -9.85 -17.30 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_9599494.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.644 kcal (2) G-P(sol) polarization free energy of solvation -7.447 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.091 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.852 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.299 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.943 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds