Wall clock time and date at job start Sun Mar 7 2021 04:58:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.35445 * 125.56676 * 2 1 4 4 C 1.50706 * 126.06477 * 359.97438 * 3 2 1 5 5 O 1.42904 * 109.46917 * 149.97707 * 4 3 2 6 6 Si 1.86294 * 109.47360 * 29.97382 * 4 3 2 7 7 C 1.39835 * 107.86822 * 179.71617 * 3 2 1 8 8 C 1.50694 * 126.45988 * 180.26411 * 7 3 2 9 9 C 1.37870 * 107.08110 * 0.41752 * 7 3 2 10 10 C 1.46682 * 126.23378 * 179.84361 * 9 7 3 11 11 O 1.21693 * 119.99805 * 359.71773 * 10 9 7 12 12 N 1.34777 * 120.00182 * 179.71906 * 10 9 7 13 13 C 1.46498 * 119.99828 * 180.27909 * 12 10 9 14 14 H 1.09002 * 112.85022 * 335.91707 * 13 12 10 15 15 C 1.53782 * 113.61718 * 107.22525 * 13 12 10 16 16 C 1.53783 * 87.08212 * 139.98032 * 15 13 12 17 17 H 1.08993 * 113.61373 * 89.11550 * 16 15 13 18 18 C 1.53003 * 113.61122 * 220.02111 * 16 15 13 19 19 O 1.42902 * 109.46793 * 272.49642 * 18 16 15 20 20 C 1.35900 * 116.99635 * 180.02562 * 19 18 16 21 21 C 1.38732 * 120.05926 * 359.72085 * 20 19 18 22 22 C 1.38144 * 119.94574 * 179.70376 * 21 20 19 23 23 C 1.38263 * 120.05502 * 0.59724 * 22 21 20 24 24 C 1.38268 * 120.11164 * 359.67937 * 23 22 21 25 25 C 1.38141 * 120.05299 * 0.02562 * 24 23 22 26 26 C 1.53781 * 113.61158 * 204.72374 * 13 12 10 27 27 N 1.35539 * 125.56046 * 179.97438 * 2 1 3 28 28 H 1.09002 * 109.47354 * 270.00299 * 1 2 3 29 29 H 1.09003 * 109.46955 * 29.99967 * 1 2 3 30 30 H 1.09000 * 109.47367 * 150.00023 * 1 2 3 31 31 H 1.08995 * 109.46767 * 269.97105 * 4 3 2 32 32 H 0.96696 * 113.99728 * 299.99227 * 5 4 3 33 33 H 1.48497 * 110.00123 * 58.68254 * 6 4 3 34 34 H 1.48503 * 110.00115 * 180.02562 * 6 4 3 35 35 H 1.09006 * 109.47220 * 270.20653 * 8 7 3 36 36 H 1.08994 * 109.47618 * 30.20959 * 8 7 3 37 37 H 1.09005 * 109.47152 * 150.21118 * 8 7 3 38 38 H 0.97001 * 119.99727 * 359.97438 * 12 10 9 39 39 H 1.09002 * 113.61513 * 254.52730 * 15 13 12 40 40 H 1.08999 * 113.61337 * 25.42719 * 15 13 12 41 41 H 1.09002 * 109.47288 * 32.49672 * 18 16 15 42 42 H 1.08999 * 109.46924 * 152.49697 * 18 16 15 43 43 H 1.08006 * 120.02316 * 0.02562 * 21 20 19 44 44 H 1.08002 * 119.97357 * 180.28213 * 22 21 20 45 45 H 1.08003 * 119.94723 * 179.70790 * 23 22 21 46 46 H 1.07996 * 119.97317 * 180.02562 * 24 23 22 47 47 H 1.08001 * 120.02290 * 180.02562 * 25 24 23 48 48 H 1.09001 * 113.61403 * 334.56380 * 26 13 12 49 49 H 1.08994 * 113.61554 * 105.38809 * 26 13 12 50 50 H 0.96995 * 125.67717 * 0.04976 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8199 2.5320 -0.0005 5 8 2.7767 3.3519 0.6737 6 14 0.1799 2.6422 0.8763 7 6 3.6269 0.6767 0.0066 8 6 4.8485 1.5591 0.0146 9 6 3.6121 -0.7019 0.0009 10 6 4.7859 -1.5816 0.0014 11 8 5.9048 -1.1032 0.0021 12 7 4.6252 -2.9198 0.0011 13 6 5.7975 -3.7983 0.0078 14 1 6.6884 -3.3184 -0.3974 15 6 6.0330 -4.5011 1.3552 16 6 6.4055 -5.7551 0.5467 17 1 7.4632 -5.8108 0.2898 18 6 5.8699 -7.0549 1.1505 19 8 6.8075 -7.5591 2.1037 20 6 6.4821 -8.7171 2.7362 21 6 5.2824 -9.3521 2.4495 22 6 4.9568 -10.5323 3.0892 23 6 5.8197 -11.0744 4.0236 24 6 7.0134 -10.4406 4.3153 25 6 7.3464 -9.2633 3.6739 26 6 5.5261 -5.1921 -0.5824 27 7 2.2952 -1.1026 0.0005 28 1 -0.3634 0.0001 1.0277 29 1 -0.3633 0.8900 -0.5138 30 1 -0.3634 -0.8900 -0.5138 31 1 1.7063 2.8767 -1.0283 32 1 2.9285 3.1020 1.5954 33 1 0.3143 2.1453 2.2692 34 1 -0.2996 4.0477 0.8821 35 1 5.1465 1.7764 -1.0112 36 1 4.6203 2.4909 0.5318 37 1 5.6625 1.0480 0.5288 38 1 3.7333 -3.3011 0.0009 39 1 6.8646 -4.0859 1.9248 40 1 5.1276 -4.6183 1.9506 41 1 4.9180 -6.8609 1.6448 42 1 5.7251 -7.7905 0.3592 43 1 4.6060 -8.9266 1.7229 44 1 4.0250 -11.0294 2.8630 45 1 5.5612 -11.9948 4.5262 46 1 7.6860 -10.8662 5.0453 47 1 8.2792 -8.7689 3.9018 48 1 4.4821 -5.4984 -0.5167 49 1 5.9471 -5.3344 -1.5776 50 1 1.9832 -2.0210 0.0002 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16536076_12297754.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:20 Heat of formation + Delta-G solvation = -11.637957 kcal Electronic energy + Delta-G solvation = -30718.601323 eV Core-core repulsion = 26486.042470 eV Total energy + Delta-G solvation = -4232.558853 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -42.68906 -41.39840 -40.69285 -39.29501 -38.09108 -37.84477 -34.87135 -33.65906 -33.03824 -32.02740 -31.07768 -29.39649 -29.26004 -27.39312 -26.92250 -26.34842 -24.42238 -23.42708 -22.84283 -22.03015 -21.17352 -20.69461 -20.23907 -19.35623 -19.09578 -17.82295 -17.44720 -17.00965 -16.95035 -16.77489 -16.62370 -16.45238 -16.16134 -15.79630 -15.67580 -15.33774 -15.09530 -14.77885 -14.41648 -14.31112 -14.29152 -14.19651 -14.04514 -13.91566 -13.71768 -13.69946 -13.32796 -13.24184 -13.17571 -13.07060 -12.63405 -12.50667 -12.40956 -12.26146 -12.11887 -11.93583 -11.77210 -11.75473 -11.40963 -10.99386 -10.44515 -10.17803 -9.96779 -9.50258 -9.16802 -8.99218 -4.81861 0.37621 0.40066 0.49531 1.21127 1.66409 1.67754 1.89939 1.97131 2.07803 2.20097 2.37008 2.84033 3.24057 3.33508 3.42082 3.60770 3.62052 3.62516 3.77933 3.84546 3.89605 3.96559 4.01279 4.08871 4.14914 4.18641 4.24217 4.29462 4.40546 4.43937 4.44667 4.49179 4.55280 4.60734 4.65914 4.70598 4.71429 4.75057 4.81295 4.91712 4.93865 5.03995 5.09092 5.15953 5.33144 5.36381 5.41474 5.45470 5.49822 5.59741 5.72708 5.80987 5.94642 6.26075 6.42803 6.44014 6.55803 7.15681 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C 0.066 3.934 3 C -0.210 4.210 4 C -0.034 4.034 5 O -0.527 6.527 6 Si 0.653 3.347 7 C -0.040 4.040 8 C -0.101 4.101 9 C -0.068 4.068 10 C 0.592 3.408 11 O -0.521 6.521 12 N -0.724 5.724 13 C 0.126 3.874 14 H 0.122 0.878 15 C -0.145 4.145 16 C -0.107 4.107 17 H 0.109 0.891 18 C 0.072 3.928 19 O -0.312 6.312 20 C 0.129 3.871 21 C -0.211 4.211 22 C -0.081 4.081 23 C -0.159 4.159 24 C -0.080 4.080 25 C -0.153 4.153 26 C -0.136 4.136 27 N -0.535 5.535 28 H 0.088 0.912 29 H 0.102 0.898 30 H 0.087 0.913 31 H 0.112 0.888 32 H 0.374 0.626 33 H -0.261 1.261 34 H -0.255 1.255 35 H 0.066 0.934 36 H 0.081 0.919 37 H 0.075 0.925 38 H 0.393 0.607 39 H 0.079 0.921 40 H 0.085 0.915 41 H 0.063 0.937 42 H 0.065 0.935 43 H 0.126 0.874 44 H 0.125 0.875 45 H 0.124 0.876 46 H 0.130 0.870 47 H 0.131 0.869 48 H 0.088 0.912 49 H 0.084 0.916 50 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.775 -5.246 -1.298 8.666 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C -0.052 4.052 3 C -0.217 4.217 4 C -0.144 4.144 5 O -0.334 6.334 6 Si 0.554 3.446 7 C -0.048 4.048 8 C -0.157 4.157 9 C -0.179 4.179 10 C 0.381 3.619 11 O -0.396 6.396 12 N -0.375 5.375 13 C 0.022 3.978 14 H 0.140 0.860 15 C -0.184 4.184 16 C -0.126 4.126 17 H 0.127 0.873 18 C -0.003 4.003 19 O -0.226 6.226 20 C 0.084 3.916 21 C -0.230 4.230 22 C -0.099 4.099 23 C -0.177 4.177 24 C -0.098 4.098 25 C -0.172 4.172 26 C -0.175 4.175 27 N -0.132 5.132 28 H 0.106 0.894 29 H 0.120 0.880 30 H 0.106 0.894 31 H 0.130 0.870 32 H 0.222 0.778 33 H -0.185 1.185 34 H -0.180 1.180 35 H 0.085 0.915 36 H 0.100 0.900 37 H 0.094 0.906 38 H 0.227 0.773 39 H 0.098 0.902 40 H 0.103 0.897 41 H 0.081 0.919 42 H 0.083 0.917 43 H 0.144 0.856 44 H 0.143 0.857 45 H 0.142 0.858 46 H 0.148 0.852 47 H 0.149 0.851 48 H 0.106 0.894 49 H 0.103 0.897 50 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -6.196 -4.297 -1.197 7.635 hybrid contribution 0.116 -0.789 0.606 1.002 sum -6.080 -5.086 -0.591 7.949 Atomic orbital electron populations 1.20418 0.87605 1.03698 1.04152 1.20151 0.93403 0.85762 1.05914 1.19553 0.92945 0.94851 1.14372 1.24252 1.01121 0.86802 1.02264 1.86554 1.61007 1.57056 1.28742 0.95576 0.82200 0.83700 0.83134 1.19807 0.94876 0.90682 0.99457 1.20566 0.93842 0.98581 1.02746 1.20115 0.82730 0.94141 1.20961 1.17050 0.87583 0.81294 0.75994 1.90845 1.24179 1.74888 1.49700 1.45851 1.09338 1.05788 1.76514 1.22497 0.89972 0.88401 0.96965 0.86026 1.23567 1.02615 0.95205 0.97026 1.22361 1.01478 0.92105 0.96625 0.87285 1.22796 0.91708 0.95188 0.90602 1.86086 1.46272 1.36553 1.53686 1.19033 0.93588 0.86011 0.92980 1.21256 0.97650 0.98995 1.05101 1.20987 0.99191 0.94579 0.95116 1.21124 0.95281 1.01272 1.00070 1.21033 0.96557 0.93992 0.98207 1.20501 1.00599 0.97697 0.98367 1.23362 1.00603 0.94569 0.98918 1.41730 1.05323 1.08182 1.57984 0.89406 0.88001 0.89432 0.86995 0.77785 1.18541 1.17972 0.91521 0.90023 0.90602 0.77319 0.90206 0.89651 0.91901 0.91670 0.85646 0.85745 0.85770 0.85211 0.85135 0.89355 0.89721 0.74745 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.53 8.21 36.00 0.30 0.82 16 2 C 0.07 -0.10 6.84 -81.95 -0.56 -0.66 16 3 C -0.21 -0.20 5.38 -105.02 -0.57 -0.76 16 4 C -0.03 -0.02 3.03 36.01 0.11 0.09 16 5 O -0.53 -1.04 10.20 -35.23 -0.36 -1.40 16 6 Si 0.65 -0.59 26.76 -169.99 -4.55 -5.14 16 7 C -0.04 -0.12 6.15 -104.16 -0.64 -0.76 16 8 C -0.10 -0.35 9.51 36.00 0.34 -0.01 16 9 C -0.07 -0.11 7.06 -81.98 -0.58 -0.69 16 10 C 0.59 1.47 7.79 -12.85 -0.10 1.37 16 11 O -0.52 -3.20 14.40 5.20 0.07 -3.13 16 12 N -0.72 0.82 5.35 -54.32 -0.29 0.53 16 13 C 0.13 -0.14 4.24 -67.12 -0.28 -0.42 16 14 H 0.12 0.09 7.47 -51.93 -0.39 -0.30 16 15 C -0.15 0.16 7.43 -25.92 -0.19 -0.04 16 16 C -0.11 0.20 4.01 -89.80 -0.36 -0.16 16 17 H 0.11 -0.15 8.14 -51.93 -0.42 -0.57 16 18 C 0.07 -0.09 4.58 37.16 0.17 0.08 16 19 O -0.31 -0.59 10.14 -19.43 -0.20 -0.79 16 20 C 0.13 0.27 6.69 -39.22 -0.26 0.01 16 21 C -0.21 -0.18 9.04 -39.43 -0.36 -0.54 16 22 C -0.08 -0.04 10.04 -39.61 -0.40 -0.44 16 23 C -0.16 -0.09 10.04 -39.56 -0.40 -0.49 16 24 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16 25 C -0.15 -0.28 9.99 -39.43 -0.39 -0.67 16 26 C -0.14 0.44 7.39 -25.92 -0.19 0.25 16 27 N -0.53 1.00 5.99 -5.70 -0.03 0.96 16 28 H 0.09 -0.49 7.13 -51.93 -0.37 -0.86 16 29 H 0.10 -0.64 5.17 -51.93 -0.27 -0.91 16 30 H 0.09 -0.61 8.14 -51.93 -0.42 -1.03 16 31 H 0.11 -0.01 7.96 -51.93 -0.41 -0.42 16 32 H 0.37 -0.11 8.46 45.56 0.39 0.28 16 33 H -0.26 -0.43 7.11 56.52 0.40 -0.03 16 34 H -0.25 -0.66 7.11 56.52 0.40 -0.25 16 35 H 0.07 0.26 8.14 -51.93 -0.42 -0.16 16 36 H 0.08 0.22 5.47 -51.93 -0.28 -0.06 16 37 H 0.08 0.37 6.49 -51.93 -0.34 0.03 16 38 H 0.39 -1.63 7.86 -40.82 -0.32 -1.95 16 39 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 40 H 0.08 -0.12 7.90 -51.93 -0.41 -0.53 16 41 H 0.06 -0.13 7.35 -51.93 -0.38 -0.52 16 42 H 0.07 -0.13 7.67 -51.93 -0.40 -0.53 16 43 H 0.13 -0.14 6.30 -52.48 -0.33 -0.47 16 44 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 45 H 0.12 -0.15 8.06 -52.48 -0.42 -0.57 16 46 H 0.13 -0.16 8.06 -52.49 -0.42 -0.59 16 47 H 0.13 0.12 8.06 -52.49 -0.42 -0.31 16 48 H 0.09 -0.42 8.08 -51.93 -0.42 -0.84 16 49 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 50 H 0.42 -2.20 8.19 -40.82 -0.33 -2.54 16 LS Contribution 398.95 15.07 6.01 6.01 Total: 0.00 -9.89 398.95 -11.38 -21.27 By element: Atomic # 1 Polarization: -7.57 SS G_CDS: -7.27 Total: -14.84 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: -4.76 Total: -3.47 kcal Atomic # 7 Polarization: 1.81 SS G_CDS: -0.32 Total: 1.49 kcal Atomic # 8 Polarization: -4.83 SS G_CDS: -0.48 Total: -5.31 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -4.55 Total: -5.14 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -9.89 -11.38 -21.27 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_12297754.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.627 kcal (2) G-P(sol) polarization free energy of solvation -9.887 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.260 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.378 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.265 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.638 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds