Wall clock time and date at job start Sun Mar 7 2021 04:58:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.46991 * 2 1 4 4 C 1.50697 * 109.47613 * 120.00425 * 2 1 3 5 5 C 1.37853 * 119.89395 * 64.99954 * 4 2 1 6 6 C 1.39657 * 119.87928 * 180.02562 * 5 4 2 7 7 C 1.47695 * 120.16495 * 179.97438 * 6 5 4 8 8 O 1.21569 * 120.00241 * 180.02562 * 7 6 5 9 9 N 1.34780 * 120.00004 * 359.97438 * 7 6 5 10 10 C 1.46500 * 119.99950 * 179.97438 * 9 7 6 11 11 H 1.09005 * 112.85165 * 336.19769 * 10 9 7 12 12 C 1.53946 * 113.66655 * 107.44310 * 10 9 7 13 13 C 1.53782 * 87.02248 * 139.93410 * 12 10 9 14 14 H 1.09000 * 113.61736 * 89.22252 * 13 12 10 15 15 C 1.52999 * 113.61793 * 220.05336 * 13 12 10 16 16 O 1.42905 * 109.46728 * 274.13457 * 15 13 12 17 17 C 1.35896 * 117.00039 * 179.97438 * 16 15 13 18 18 C 1.38738 * 120.05353 * 359.72616 * 17 16 15 19 19 C 1.38149 * 119.94056 * 179.70430 * 18 17 16 20 20 C 1.38261 * 120.05702 * 0.59118 * 19 18 17 21 21 C 1.38262 * 120.11084 * 359.67801 * 20 19 18 22 22 C 1.38145 * 120.05942 * 0.02720 * 21 20 19 23 23 C 1.53783 * 113.61538 * 205.00633 * 10 9 7 24 24 C 1.39822 * 119.66807 * 0.25126 * 6 5 4 25 25 F 1.35102 * 120.11080 * 179.72361 * 24 6 5 26 26 C 1.38319 * 119.77551 * 359.53921 * 24 6 5 27 27 C 1.38200 * 120.12287 * 0.44170 * 26 24 6 28 28 H 0.96701 * 114.00573 * 60.00250 * 1 2 3 29 29 H 1.09009 * 109.47046 * 240.00737 * 2 1 3 30 30 H 1.48504 * 109.99954 * 298.68312 * 3 2 1 31 31 H 1.48501 * 109.99869 * 60.00170 * 3 2 1 32 32 H 1.08004 * 120.05736 * 0.02562 * 5 4 2 33 33 H 0.96997 * 120.00098 * 0.02562 * 9 7 6 34 34 H 1.08997 * 113.61508 * 25.41438 * 12 10 9 35 35 H 1.08998 * 113.66796 * 254.46082 * 12 10 9 36 36 H 1.09000 * 109.47486 * 154.13396 * 15 13 12 37 37 H 1.09001 * 109.47362 * 34.12673 * 15 13 12 38 38 H 1.07995 * 120.02746 * 359.97438 * 18 17 16 39 39 H 1.07997 * 119.96853 * 180.31852 * 19 18 17 40 40 H 1.08002 * 119.94694 * 179.70714 * 20 19 18 41 41 H 1.08008 * 119.97547 * 180.02562 * 21 20 19 42 42 H 1.07999 * 120.03439 * 180.02562 * 22 21 20 43 43 H 1.08995 * 113.61418 * 105.46976 * 23 10 9 44 44 H 1.08995 * 113.68691 * 334.57513 * 23 10 9 45 45 H 1.08011 * 119.93861 * 180.18698 * 26 24 6 46 46 H 1.08002 * 119.83704 * 179.76613 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.6843 -2.0566 1.3955 6 6 2.1496 -2.7146 2.5361 7 6 1.8879 -4.1565 2.7197 8 8 2.2940 -4.7262 3.7139 9 7 1.1981 -4.8406 1.7855 10 6 0.9391 -6.2710 1.9673 11 1 1.6599 -6.7509 2.6294 12 6 -0.5259 -6.5947 2.3123 13 6 -0.3945 -7.8073 1.3756 14 1 -0.0396 -8.7086 1.8753 15 6 -1.6352 -8.0543 0.5150 16 8 -2.5712 -8.8493 1.2458 17 6 -3.7366 -9.1613 0.6203 18 6 -3.9768 -8.7067 -0.6683 19 6 -5.1597 -9.0304 -1.3043 20 6 -6.1089 -9.7964 -0.6533 21 6 -5.8742 -10.2459 0.6330 22 6 -4.6904 -9.9301 1.2712 23 6 0.7146 -7.0290 0.6483 24 6 2.8594 -2.0002 3.5060 25 9 3.3088 -2.6265 4.6155 26 6 3.1031 -0.6508 3.3240 27 6 2.6389 -0.0087 2.1917 28 1 -0.3934 0.4417 -0.7650 29 1 1.7923 -0.5138 -0.8901 30 1 1.5877 2.4586 -1.2242 31 1 1.5614 2.4679 1.2085 32 1 1.1318 -2.6013 0.6441 33 1 0.8738 -4.3860 0.9923 34 1 -1.2336 -5.8448 1.9590 35 1 -0.6800 -6.8647 3.3570 36 1 -1.3469 -8.5782 -0.3963 37 1 -2.0936 -7.0999 0.2559 38 1 -3.2379 -8.1041 -1.1753 39 1 -5.3450 -8.6811 -2.3093 40 1 -7.0351 -10.0444 -1.1504 41 1 -6.6171 -10.8445 1.1394 42 1 -4.5074 -10.2818 2.2758 43 1 1.5605 -7.6490 0.3516 44 1 0.3469 -6.3991 -0.1616 45 1 3.6538 -0.0971 4.0702 46 1 2.8286 1.0458 2.0561 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16536076_12335834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:28 Heat of formation + Delta-G solvation = -61.998933 kcal Electronic energy + Delta-G solvation = -30295.986103 eV Core-core repulsion = 25840.064467 eV Total energy + Delta-G solvation = -4455.921636 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -49.82414 -41.59384 -41.05255 -40.31572 -39.25858 -38.06883 -37.72871 -34.84042 -32.75471 -32.43636 -31.96925 -30.99043 -29.09881 -26.87279 -26.73009 -25.80550 -24.37032 -23.46597 -23.00836 -22.21168 -21.59487 -20.72038 -19.24739 -19.00566 -18.77346 -18.25950 -17.88953 -17.42858 -16.95846 -16.88816 -16.74298 -16.51592 -16.38983 -16.09057 -15.80541 -15.70366 -15.57041 -15.29864 -14.81312 -14.47337 -14.36221 -14.24607 -14.16016 -14.06832 -13.86299 -13.65567 -13.43016 -13.24510 -13.03875 -12.77338 -12.60990 -12.53366 -12.41333 -12.07486 -11.91644 -11.86874 -11.71469 -11.36498 -10.97542 -10.68000 -10.39105 -10.08485 -9.93446 -9.82141 -9.13252 -5.13219 -0.49040 -0.08127 0.40914 0.52897 1.07427 1.43101 1.65413 1.79360 1.93600 2.20698 2.46002 2.87347 3.03638 3.06668 3.28410 3.36068 3.39909 3.49694 3.59081 3.66270 3.69189 3.88045 3.90140 3.93526 4.01055 4.12937 4.13941 4.18861 4.22101 4.28104 4.44554 4.47479 4.51232 4.53124 4.60393 4.65454 4.67256 4.74408 4.80518 4.86743 4.87417 4.97624 5.07338 5.08210 5.15259 5.36773 5.44918 5.48715 5.55384 5.62847 5.84344 6.22653 6.36886 6.47676 7.13187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.075 4.075 3 Si 0.683 3.317 4 C -0.093 4.093 5 C -0.030 4.030 6 C -0.176 4.176 7 C 0.561 3.439 8 O -0.519 6.519 9 N -0.716 5.716 10 C 0.124 3.876 11 H 0.121 0.879 12 C -0.145 4.145 13 C -0.107 4.107 14 H 0.108 0.892 15 C 0.072 3.928 16 O -0.312 6.312 17 C 0.129 3.871 18 C -0.211 4.211 19 C -0.081 4.081 20 C -0.160 4.160 21 C -0.080 4.080 22 C -0.153 4.153 23 C -0.136 4.136 24 C 0.168 3.832 25 F -0.110 7.110 26 C -0.156 4.156 27 C -0.058 4.058 28 H 0.383 0.617 29 H 0.081 0.919 30 H -0.258 1.258 31 H -0.252 1.252 32 H 0.137 0.863 33 H 0.400 0.600 34 H 0.087 0.913 35 H 0.079 0.921 36 H 0.065 0.935 37 H 0.063 0.937 38 H 0.126 0.874 39 H 0.124 0.876 40 H 0.124 0.876 41 H 0.130 0.870 42 H 0.131 0.869 43 H 0.084 0.916 44 H 0.090 0.910 45 H 0.151 0.849 46 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.794 3.063 -7.084 7.758 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.184 4.184 3 Si 0.584 3.416 4 C -0.094 4.094 5 C -0.049 4.049 6 C -0.180 4.180 7 C 0.348 3.652 8 O -0.395 6.395 9 N -0.367 5.367 10 C 0.020 3.980 11 H 0.139 0.861 12 C -0.184 4.184 13 C -0.126 4.126 14 H 0.127 0.873 15 C -0.003 4.003 16 O -0.226 6.226 17 C 0.084 3.916 18 C -0.230 4.230 19 C -0.099 4.099 20 C -0.178 4.178 21 C -0.098 4.098 22 C -0.172 4.172 23 C -0.174 4.174 24 C 0.147 3.853 25 F -0.088 7.088 26 C -0.175 4.175 27 C -0.076 4.076 28 H 0.231 0.769 29 H 0.099 0.901 30 H -0.183 1.183 31 H -0.177 1.177 32 H 0.154 0.846 33 H 0.236 0.764 34 H 0.105 0.895 35 H 0.098 0.902 36 H 0.083 0.917 37 H 0.082 0.918 38 H 0.144 0.856 39 H 0.142 0.858 40 H 0.142 0.858 41 H 0.148 0.852 42 H 0.149 0.851 43 H 0.103 0.897 44 H 0.108 0.892 45 H 0.169 0.831 46 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 1.073 3.094 -5.562 6.455 hybrid contribution -1.281 0.105 -1.039 1.652 sum -0.207 3.199 -6.601 7.338 Atomic orbital electron populations 1.86583 1.17508 1.80226 1.50038 1.24757 0.84729 1.11190 0.97765 0.95028 0.91516 0.74362 0.80730 1.19188 1.00231 0.93688 0.96274 1.20979 0.94969 0.93864 0.95070 1.20048 1.05975 0.94628 0.97364 1.18002 0.78069 0.85924 0.83219 1.90871 1.50558 1.69799 1.28258 1.45838 1.56891 1.10090 1.23903 1.22557 0.97426 0.79973 0.98067 0.86083 1.23590 0.96711 0.96996 1.01106 1.22360 0.93767 0.98868 0.97591 0.87345 1.22802 0.88276 0.94437 0.94820 1.86084 1.25674 1.67880 1.42944 1.19037 0.86181 0.94990 0.91374 1.21264 1.00253 1.06187 0.95286 1.20986 0.92896 0.96464 0.99531 1.21117 1.00150 1.00842 0.95674 1.21030 0.96017 0.98046 0.94720 1.20499 0.93517 1.01859 1.01304 1.23357 0.98567 0.98556 0.96898 1.17742 0.94025 0.90443 0.83105 1.91631 1.85904 1.82322 1.48976 1.21147 1.03709 0.92597 1.00008 1.21084 0.94727 0.99936 0.91839 0.76880 0.90109 1.18301 1.17677 0.84556 0.76401 0.89490 0.90209 0.91666 0.91831 0.85610 0.85754 0.85794 0.85234 0.85145 0.89694 0.89194 0.83135 0.84037 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.68 12.81 -35.23 -0.45 0.23 16 2 C -0.07 0.19 2.79 36.00 0.10 0.29 16 3 Si 0.68 -2.01 29.84 -169.99 -5.07 -7.08 16 4 C -0.09 0.10 5.38 -104.68 -0.56 -0.47 16 5 C -0.03 0.02 9.17 -39.19 -0.36 -0.34 16 6 C -0.18 -0.31 5.88 -104.91 -0.62 -0.93 16 7 C 0.56 1.78 7.77 -12.40 -0.10 1.69 16 8 O -0.52 -3.77 14.94 5.31 0.08 -3.69 16 9 N -0.72 0.19 5.31 -53.92 -0.29 -0.10 16 10 C 0.12 -0.06 4.24 -67.03 -0.28 -0.34 16 11 H 0.12 0.15 7.46 -51.93 -0.39 -0.23 16 12 C -0.15 0.06 7.45 -25.83 -0.19 -0.13 16 13 C -0.11 0.15 4.00 -89.80 -0.36 -0.21 16 14 H 0.11 -0.11 8.14 -51.93 -0.42 -0.53 16 15 C 0.07 -0.06 4.57 37.16 0.17 0.11 16 16 O -0.31 -0.71 10.14 -19.41 -0.20 -0.90 16 17 C 0.13 0.32 6.69 -39.21 -0.26 0.06 16 18 C -0.21 -0.26 9.04 -39.43 -0.36 -0.62 16 19 C -0.08 -0.07 10.04 -39.61 -0.40 -0.46 16 20 C -0.16 -0.14 10.04 -39.56 -0.40 -0.54 16 21 C -0.08 -0.09 10.04 -39.61 -0.40 -0.49 16 22 C -0.15 -0.33 9.99 -39.43 -0.39 -0.72 16 23 C -0.14 0.38 7.40 -25.92 -0.19 0.19 16 24 C 0.17 0.42 7.29 -38.96 -0.28 0.13 16 25 F -0.11 -0.57 15.55 2.25 0.04 -0.54 16 26 C -0.16 0.04 10.01 -39.57 -0.40 -0.35 16 27 C -0.06 0.08 8.66 -39.51 -0.34 -0.26 16 28 H 0.38 -1.92 8.74 45.56 0.40 -1.52 16 29 H 0.08 -0.37 7.96 -51.92 -0.41 -0.78 16 30 H -0.26 0.17 7.11 56.52 0.40 0.57 16 31 H -0.25 -0.04 7.04 56.52 0.40 0.36 16 32 H 0.14 -0.42 6.41 -52.48 -0.34 -0.76 16 33 H 0.40 -1.21 6.76 -40.82 -0.28 -1.48 16 34 H 0.09 -0.06 7.92 -51.93 -0.41 -0.47 16 35 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 36 H 0.07 -0.11 7.68 -51.93 -0.40 -0.51 16 37 H 0.06 -0.10 7.38 -51.93 -0.38 -0.49 16 38 H 0.13 -0.09 6.30 -52.49 -0.33 -0.42 16 39 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 40 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 41 H 0.13 -0.13 8.06 -52.48 -0.42 -0.55 16 42 H 0.13 0.16 8.06 -52.49 -0.42 -0.27 16 43 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 44 H 0.09 -0.38 8.08 -51.93 -0.42 -0.80 16 45 H 0.15 -0.36 8.06 -52.48 -0.42 -0.78 16 46 H 0.14 -0.49 4.84 -52.49 -0.25 -0.75 16 LS Contribution 387.41 15.07 5.84 5.84 Total: 0.00 -9.68 387.41 -11.47 -21.15 By element: Atomic # 1 Polarization: -5.74 SS G_CDS: -5.80 Total: -11.53 kcal Atomic # 6 Polarization: 2.24 SS G_CDS: -5.62 Total: -3.38 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: -0.29 Total: -0.10 kcal Atomic # 8 Polarization: -3.79 SS G_CDS: -0.57 Total: -4.36 kcal Atomic # 9 Polarization: -0.57 SS G_CDS: 0.04 Total: -0.54 kcal Atomic # 14 Polarization: -2.01 SS G_CDS: -5.07 Total: -7.08 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -9.68 -11.47 -21.15 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_12335834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.847 kcal (2) G-P(sol) polarization free energy of solvation -9.681 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.529 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.470 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.152 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.999 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds