Wall clock time and date at job start Sun Mar 7 2021 04:58:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.46991 * 2 1 4 4 C 1.50697 * 109.47613 * 120.00425 * 2 1 3 5 5 C 1.37853 * 119.89395 * 64.99954 * 4 2 1 6 6 C 1.39657 * 119.87928 * 180.02562 * 5 4 2 7 7 C 1.47695 * 120.16495 * 179.97438 * 6 5 4 8 8 O 1.21569 * 120.00241 * 180.02562 * 7 6 5 9 9 N 1.34780 * 120.00004 * 359.97438 * 7 6 5 10 10 C 1.46500 * 119.99950 * 179.97438 * 9 7 6 11 11 H 1.09005 * 112.85165 * 336.19769 * 10 9 7 12 12 C 1.53946 * 113.66655 * 107.44310 * 10 9 7 13 13 C 1.53782 * 87.02248 * 139.93410 * 12 10 9 14 14 H 1.09000 * 113.61736 * 89.22252 * 13 12 10 15 15 C 1.52999 * 113.61793 * 220.05336 * 13 12 10 16 16 O 1.42905 * 109.46728 * 274.13457 * 15 13 12 17 17 C 1.35896 * 117.00039 * 179.97438 * 16 15 13 18 18 C 1.38738 * 120.05353 * 359.72616 * 17 16 15 19 19 C 1.38149 * 119.94056 * 179.70430 * 18 17 16 20 20 C 1.38261 * 120.05702 * 0.59118 * 19 18 17 21 21 C 1.38262 * 120.11084 * 359.67801 * 20 19 18 22 22 C 1.38145 * 120.05942 * 0.02720 * 21 20 19 23 23 C 1.53783 * 113.61538 * 205.00633 * 10 9 7 24 24 C 1.39822 * 119.66807 * 0.25126 * 6 5 4 25 25 F 1.35102 * 120.11080 * 179.72361 * 24 6 5 26 26 C 1.38319 * 119.77551 * 359.53921 * 24 6 5 27 27 C 1.38200 * 120.12287 * 0.44170 * 26 24 6 28 28 H 0.96701 * 114.00573 * 60.00250 * 1 2 3 29 29 H 1.09009 * 109.47046 * 240.00737 * 2 1 3 30 30 H 1.48504 * 109.99954 * 298.68312 * 3 2 1 31 31 H 1.48501 * 109.99869 * 60.00170 * 3 2 1 32 32 H 1.08004 * 120.05736 * 0.02562 * 5 4 2 33 33 H 0.96997 * 120.00098 * 0.02562 * 9 7 6 34 34 H 1.08997 * 113.61508 * 25.41438 * 12 10 9 35 35 H 1.08998 * 113.66796 * 254.46082 * 12 10 9 36 36 H 1.09000 * 109.47486 * 154.13396 * 15 13 12 37 37 H 1.09001 * 109.47362 * 34.12673 * 15 13 12 38 38 H 1.07995 * 120.02746 * 359.97438 * 18 17 16 39 39 H 1.07997 * 119.96853 * 180.31852 * 19 18 17 40 40 H 1.08002 * 119.94694 * 179.70714 * 20 19 18 41 41 H 1.08008 * 119.97547 * 180.02562 * 21 20 19 42 42 H 1.07999 * 120.03439 * 180.02562 * 22 21 20 43 43 H 1.08995 * 113.61418 * 105.46976 * 23 10 9 44 44 H 1.08995 * 113.68691 * 334.57513 * 23 10 9 45 45 H 1.08011 * 119.93861 * 180.18698 * 26 24 6 46 46 H 1.08002 * 119.83704 * 179.76613 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.6843 -2.0566 1.3955 6 6 2.1496 -2.7146 2.5361 7 6 1.8879 -4.1565 2.7197 8 8 2.2940 -4.7262 3.7139 9 7 1.1981 -4.8406 1.7855 10 6 0.9391 -6.2710 1.9673 11 1 1.6599 -6.7509 2.6294 12 6 -0.5259 -6.5947 2.3123 13 6 -0.3945 -7.8073 1.3756 14 1 -0.0396 -8.7086 1.8753 15 6 -1.6352 -8.0543 0.5150 16 8 -2.5712 -8.8493 1.2458 17 6 -3.7366 -9.1613 0.6203 18 6 -3.9768 -8.7067 -0.6683 19 6 -5.1597 -9.0304 -1.3043 20 6 -6.1089 -9.7964 -0.6533 21 6 -5.8742 -10.2459 0.6330 22 6 -4.6904 -9.9301 1.2712 23 6 0.7146 -7.0290 0.6483 24 6 2.8594 -2.0002 3.5060 25 9 3.3088 -2.6265 4.6155 26 6 3.1031 -0.6508 3.3240 27 6 2.6389 -0.0087 2.1917 28 1 -0.3934 0.4417 -0.7650 29 1 1.7923 -0.5138 -0.8901 30 1 1.5877 2.4586 -1.2242 31 1 1.5614 2.4679 1.2085 32 1 1.1318 -2.6013 0.6441 33 1 0.8738 -4.3860 0.9923 34 1 -1.2336 -5.8448 1.9590 35 1 -0.6800 -6.8647 3.3570 36 1 -1.3469 -8.5782 -0.3963 37 1 -2.0936 -7.0999 0.2559 38 1 -3.2379 -8.1041 -1.1753 39 1 -5.3450 -8.6811 -2.3093 40 1 -7.0351 -10.0444 -1.1504 41 1 -6.6171 -10.8445 1.1394 42 1 -4.5074 -10.2818 2.2758 43 1 1.5605 -7.6490 0.3516 44 1 0.3469 -6.3991 -0.1616 45 1 3.6538 -0.0971 4.0702 46 1 2.8286 1.0458 2.0561 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16536076_12335834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:27 Heat of formation + Delta-G solvation = -60.327549 kcal Electronic energy + Delta-G solvation = -30295.913626 eV Core-core repulsion = 25840.064467 eV Total energy + Delta-G solvation = -4455.849159 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -50.03157 -41.64799 -41.08914 -40.27807 -39.33915 -38.09997 -37.59340 -34.97665 -32.73601 -32.38514 -31.99211 -31.00796 -29.08553 -26.78202 -26.61125 -25.83198 -24.35308 -23.48961 -23.01968 -22.19154 -21.69223 -20.66994 -19.28407 -19.03220 -18.61135 -18.28507 -17.91953 -17.43311 -16.97638 -16.91364 -16.87790 -16.57105 -16.34750 -16.12622 -15.78986 -15.74689 -15.63019 -15.29667 -14.79715 -14.49221 -14.37497 -14.26236 -14.10757 -14.05691 -13.82310 -13.51463 -13.41684 -13.25530 -13.03686 -12.74909 -12.59762 -12.46571 -12.37012 -12.06041 -11.86230 -11.81316 -11.66896 -11.34171 -11.13179 -10.51385 -10.42626 -10.11603 -9.97843 -9.82925 -9.18936 -4.89192 -0.52059 -0.04179 0.36681 0.46957 1.29975 1.56272 1.63188 1.89748 1.98953 2.21805 2.43080 2.82472 3.03128 3.26460 3.34697 3.39899 3.48436 3.56955 3.72072 3.73340 3.75406 3.88562 3.95383 4.01495 4.11649 4.21749 4.24125 4.28089 4.33650 4.35914 4.48223 4.52897 4.57068 4.65075 4.67673 4.71849 4.75661 4.77876 4.82696 4.92095 4.94152 4.99899 5.06086 5.14507 5.16101 5.33038 5.45913 5.47076 5.57558 5.59148 5.84434 6.34128 6.45420 6.60983 7.02497 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.078 4.078 3 Si 0.756 3.244 4 C -0.095 4.095 5 C -0.024 4.024 6 C -0.190 4.190 7 C 0.555 3.445 8 O -0.573 6.573 9 N -0.697 5.697 10 C 0.116 3.884 11 H 0.097 0.903 12 C -0.147 4.147 13 C -0.103 4.103 14 H 0.099 0.901 15 C 0.069 3.931 16 O -0.333 6.333 17 C 0.111 3.889 18 C -0.217 4.217 19 C -0.088 4.088 20 C -0.169 4.169 21 C -0.088 4.088 22 C -0.176 4.176 23 C -0.114 4.114 24 C 0.132 3.868 25 F -0.136 7.136 26 C -0.153 4.153 27 C -0.055 4.055 28 H 0.399 0.601 29 H 0.111 0.889 30 H -0.287 1.287 31 H -0.296 1.296 32 H 0.162 0.838 33 H 0.416 0.584 34 H 0.094 0.906 35 H 0.056 0.944 36 H 0.078 0.922 37 H 0.076 0.924 38 H 0.145 0.855 39 H 0.146 0.854 40 H 0.141 0.859 41 H 0.145 0.855 42 H 0.129 0.871 43 H 0.093 0.907 44 H 0.116 0.884 45 H 0.167 0.833 46 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.292 4.026 -10.088 10.866 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.187 4.187 3 Si 0.661 3.339 4 C -0.096 4.096 5 C -0.042 4.042 6 C -0.194 4.194 7 C 0.343 3.657 8 O -0.453 6.453 9 N -0.349 5.349 10 C 0.011 3.989 11 H 0.115 0.885 12 C -0.185 4.185 13 C -0.122 4.122 14 H 0.117 0.883 15 C -0.006 4.006 16 O -0.247 6.247 17 C 0.066 3.934 18 C -0.235 4.235 19 C -0.106 4.106 20 C -0.187 4.187 21 C -0.106 4.106 22 C -0.194 4.194 23 C -0.152 4.152 24 C 0.112 3.888 25 F -0.115 7.115 26 C -0.171 4.171 27 C -0.073 4.073 28 H 0.250 0.750 29 H 0.129 0.871 30 H -0.214 1.214 31 H -0.224 1.224 32 H 0.180 0.820 33 H 0.255 0.745 34 H 0.113 0.887 35 H 0.075 0.925 36 H 0.097 0.903 37 H 0.094 0.906 38 H 0.163 0.837 39 H 0.163 0.837 40 H 0.159 0.841 41 H 0.163 0.837 42 H 0.147 0.853 43 H 0.112 0.888 44 H 0.134 0.866 45 H 0.185 0.815 46 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 0.557 4.050 -8.626 9.546 hybrid contribution -1.197 -0.109 -0.138 1.210 sum -0.640 3.941 -8.765 9.631 Atomic orbital electron populations 1.86538 1.18048 1.80666 1.51409 1.24875 0.84399 1.11359 0.98028 0.94223 0.90341 0.72578 0.76725 1.19494 0.99607 0.93658 0.96809 1.21210 0.94354 0.94183 0.94464 1.20071 1.06944 0.93923 0.98432 1.18355 0.77760 0.86655 0.82933 1.90837 1.53010 1.70931 1.30511 1.45725 1.55484 1.10080 1.23593 1.22561 0.96737 0.79956 0.99624 0.88463 1.23595 0.96823 0.97910 1.00205 1.22296 0.94271 0.98116 0.97502 0.88283 1.22974 0.87777 0.94828 0.95009 1.86059 1.26095 1.68519 1.44030 1.19263 0.86394 0.95586 0.92137 1.21518 1.00943 1.06218 0.94868 1.21329 0.92639 0.96114 1.00477 1.21429 1.00961 1.00673 0.95651 1.21288 0.96000 0.98143 0.95130 1.20705 0.94349 1.02711 1.01666 1.23294 0.98089 0.97879 0.95948 1.18202 0.95765 0.91725 0.83109 1.91558 1.86540 1.82981 1.50374 1.21354 1.03418 0.91523 1.00808 1.21374 0.93896 1.00842 0.91149 0.75038 0.87107 1.21443 1.22375 0.82012 0.74497 0.88731 0.92461 0.90342 0.90635 0.83743 0.83667 0.84093 0.83702 0.85349 0.88818 0.86619 0.81507 0.81991 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 2.62 12.81 -148.98 -1.91 0.71 16 2 C -0.08 0.59 2.79 71.23 0.20 0.79 16 3 Si 0.76 -5.50 29.84 68.60 2.05 -3.45 16 4 C -0.10 0.35 5.38 -19.90 -0.11 0.24 16 5 C -0.02 0.06 9.17 22.52 0.21 0.27 16 6 C -0.19 -0.85 5.88 -20.05 -0.12 -0.97 16 7 C 0.55 4.50 7.77 86.74 0.67 5.17 16 8 O -0.57 -10.27 14.94 -3.93 -0.06 -10.33 16 9 N -0.70 0.18 5.31 -442.77 -2.35 -2.17 16 10 C 0.12 0.00 4.24 45.57 0.19 0.19 16 11 H 0.10 0.51 7.46 -2.38 -0.02 0.49 16 12 C -0.15 -0.04 7.45 31.18 0.23 0.19 16 13 C -0.10 0.28 4.00 -10.27 -0.04 0.23 16 14 H 0.10 -0.07 8.14 -2.39 -0.02 -0.09 16 15 C 0.07 -0.15 4.57 71.98 0.33 0.18 16 16 O -0.33 -1.74 10.14 -92.39 -0.94 -2.68 16 17 C 0.11 0.60 6.69 22.51 0.15 0.75 16 18 C -0.22 -0.38 9.04 22.37 0.20 -0.18 16 19 C -0.09 -0.05 10.04 22.25 0.22 0.17 16 20 C -0.17 -0.19 10.04 22.28 0.22 0.03 16 21 C -0.09 -0.21 10.04 22.25 0.22 0.01 16 22 C -0.18 -0.94 9.99 22.37 0.22 -0.72 16 23 C -0.11 0.77 7.40 31.12 0.23 1.00 16 24 C 0.13 0.89 7.29 22.67 0.17 1.06 16 25 F -0.14 -1.85 15.55 44.97 0.70 -1.15 16 26 C -0.15 0.03 10.01 22.28 0.22 0.25 16 27 C -0.06 0.20 8.66 22.31 0.19 0.40 16 28 H 0.40 -4.84 8.74 -74.06 -0.65 -5.49 16 29 H 0.11 -1.43 7.96 -2.38 -0.02 -1.45 16 30 H -0.29 0.66 7.11 99.48 0.71 1.36 16 31 H -0.30 -0.03 7.04 99.48 0.70 0.67 16 32 H 0.16 -1.39 6.41 -2.91 -0.02 -1.41 16 33 H 0.42 -3.08 6.76 -92.71 -0.63 -3.71 16 34 H 0.09 -0.13 7.92 -2.39 -0.02 -0.15 16 35 H 0.06 0.27 8.14 -2.39 -0.02 0.25 16 36 H 0.08 -0.38 7.68 -2.39 -0.02 -0.40 16 37 H 0.08 -0.35 7.38 -2.39 -0.02 -0.37 16 38 H 0.14 -0.44 6.30 -2.91 -0.02 -0.46 16 39 H 0.15 -0.62 8.06 -2.91 -0.02 -0.65 16 40 H 0.14 -0.43 8.06 -2.91 -0.02 -0.45 16 41 H 0.15 -0.27 8.06 -2.91 -0.02 -0.29 16 42 H 0.13 0.56 8.06 -2.91 -0.02 0.54 16 43 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 44 H 0.12 -1.33 8.08 -2.39 -0.02 -1.35 16 45 H 0.17 -0.74 8.06 -2.90 -0.02 -0.77 16 46 H 0.16 -1.35 4.84 -2.91 -0.01 -1.37 16 Total: 0.00 -26.74 387.41 0.91 -25.83 By element: Atomic # 1 Polarization: -15.62 SS G_CDS: -0.20 Total: -15.82 kcal Atomic # 6 Polarization: 5.44 SS G_CDS: 3.63 Total: 9.06 kcal Atomic # 7 Polarization: 0.18 SS G_CDS: -2.35 Total: -2.17 kcal Atomic # 8 Polarization: -9.39 SS G_CDS: -2.90 Total: -12.29 kcal Atomic # 9 Polarization: -1.85 SS G_CDS: 0.70 Total: -1.15 kcal Atomic # 14 Polarization: -5.50 SS G_CDS: 2.05 Total: -3.45 kcal Total: -26.74 0.91 -25.83 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_12335834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.501 kcal (2) G-P(sol) polarization free energy of solvation -26.740 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.241 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.914 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.827 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.328 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds