Wall clock time and date at job start Sun Mar 7 2021 04:59:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47272 * 2 1 4 4 C 1.50703 * 109.46950 * 239.99972 * 2 1 3 5 5 C 1.37943 * 119.92600 * 300.02356 * 4 2 1 6 6 C 1.39587 * 119.87607 * 179.97438 * 5 4 2 7 7 C 1.47848 * 120.13730 * 180.02562 * 6 5 4 8 8 O 1.21547 * 120.00165 * 0.02562 * 7 6 5 9 9 N 1.34778 * 119.99909 * 180.02562 * 7 6 5 10 10 C 1.46504 * 120.00196 * 180.02562 * 9 7 6 11 11 H 1.08998 * 112.84824 * 25.33617 * 10 9 7 12 12 C 1.53781 * 113.61484 * 156.52804 * 10 9 7 13 13 C 1.53779 * 87.08198 * 139.98182 * 12 10 9 14 14 H 1.08994 * 113.61263 * 89.11218 * 13 12 10 15 15 C 1.52988 * 113.61556 * 219.93662 * 13 12 10 16 16 O 1.42902 * 109.47241 * 184.99995 * 15 13 12 17 17 C 1.35898 * 117.00130 * 179.97438 * 16 15 13 18 18 C 1.38735 * 120.05809 * 359.72556 * 17 16 15 19 19 C 1.38139 * 119.94339 * 179.74380 * 18 17 16 20 20 C 1.38267 * 120.05721 * 0.50646 * 19 18 17 21 21 C 1.38259 * 120.11060 * 359.77033 * 20 19 18 22 22 C 1.38142 * 120.05814 * 359.97438 * 21 20 19 23 23 C 1.53776 * 113.61477 * 254.13662 * 10 9 7 24 24 C 1.39545 * 119.72091 * 0.02562 * 6 5 4 25 25 C 1.38062 * 119.84326 * 359.97438 * 24 6 5 26 26 Br 1.89099 * 119.94088 * 180.02562 * 25 24 6 27 27 C 1.38365 * 119.91902 * 119.99996 * 4 2 1 28 28 H 0.96697 * 114.00000 * 59.99574 * 1 2 3 29 29 H 1.08999 * 109.47116 * 120.00471 * 2 1 3 30 30 H 1.48496 * 110.00392 * 298.68103 * 3 2 1 31 31 H 1.48498 * 110.00160 * 60.00448 * 3 2 1 32 32 H 1.08009 * 120.05525 * 359.95092 * 5 4 2 33 33 H 0.97003 * 119.99952 * 359.97438 * 9 7 6 34 34 H 1.08997 * 113.61347 * 254.53005 * 12 10 9 35 35 H 1.08997 * 113.61530 * 25.43292 * 12 10 9 36 36 H 1.09002 * 109.47403 * 304.99433 * 15 13 12 37 37 H 1.08999 * 109.47757 * 65.00282 * 15 13 12 38 38 H 1.07997 * 120.02615 * 359.97438 * 18 17 16 39 39 H 1.08002 * 119.97110 * 180.27381 * 19 18 17 40 40 H 1.08006 * 119.94258 * 179.74581 * 20 19 18 41 41 H 1.08009 * 119.97005 * 179.97438 * 21 20 19 42 42 H 1.07997 * 120.03051 * 179.97438 * 22 21 20 43 43 H 1.08999 * 113.61581 * 334.56685 * 23 10 9 44 44 H 1.08999 * 113.61327 * 105.47017 * 23 10 9 45 45 H 1.08003 * 120.07903 * 179.97438 * 24 6 5 46 46 H 1.07997 * 119.86062 * 359.74702 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5967 -2.0310 -1.4475 6 6 2.0620 -2.6878 -2.5879 7 6 1.7065 -4.1029 -2.8265 8 8 1.0072 -4.6966 -2.0291 9 7 2.1578 -4.7346 -3.9282 10 6 1.8050 -6.1367 -4.1650 11 1 0.8752 -6.4275 -3.6763 12 6 1.8782 -6.5489 -5.6447 13 6 2.4868 -7.8766 -5.1634 14 1 1.7440 -8.6443 -4.9471 15 6 3.6264 -8.3850 -6.0485 16 8 4.0464 -9.6722 -5.5917 17 6 5.0582 -10.2693 -6.2747 18 6 5.6312 -9.6321 -7.3658 19 6 6.6631 -10.2389 -8.0551 20 6 7.1180 -11.4849 -7.6650 21 6 6.5449 -12.1246 -6.5815 22 6 5.5162 -11.5198 -5.8856 23 6 2.9650 -7.1146 -3.9140 24 6 2.8643 -2.0032 -3.5017 25 6 3.1921 -0.6817 -3.2730 26 35 4.2784 0.2489 -4.5098 27 6 2.7266 -0.0364 -2.1402 28 1 -0.3933 0.4417 -0.7650 29 1 1.7923 -0.5139 0.8899 30 1 1.5880 2.4586 -1.2242 31 1 1.5616 2.4679 1.2085 32 1 0.9760 -2.5557 -0.7361 33 1 2.7156 -4.2607 -4.5648 34 1 0.9016 -6.6615 -6.1154 35 1 2.5656 -5.9416 -6.2337 36 1 3.2799 -8.4606 -7.0793 37 1 4.4644 -7.6899 -5.9970 38 1 5.2732 -8.6608 -7.6736 39 1 7.1124 -9.7412 -8.9018 40 1 7.9222 -11.9595 -8.2078 41 1 6.9018 -13.0981 -6.2790 42 1 5.0686 -12.0200 -5.0396 43 1 3.9500 -6.6623 -4.0289 44 1 2.8644 -7.6832 -2.9896 45 1 3.2279 -2.5059 -4.3857 46 1 2.9820 0.9987 -1.9678 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16536076_12335870.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:02 Heat of formation + Delta-G solvation = -18.095340 kcal Electronic energy + Delta-G solvation = -29536.933113 eV Core-core repulsion = 25212.551253 eV Total energy + Delta-G solvation = -4324.381860 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -41.78441 -41.17701 -40.47461 -39.33119 -38.09335 -37.83344 -34.96379 -33.68535 -33.02424 -31.99648 -31.03089 -30.53664 -29.17585 -27.12697 -26.91991 -25.87955 -24.05994 -23.30535 -22.89032 -22.50232 -21.58927 -20.77372 -19.30281 -19.07047 -18.13542 -17.79922 -17.52929 -17.14367 -16.94736 -16.80310 -16.49470 -16.34213 -16.25755 -15.90253 -15.69264 -15.36760 -15.12824 -14.98417 -14.43080 -14.34326 -14.31332 -14.23906 -14.00478 -13.69928 -13.35309 -13.33649 -13.07889 -13.02898 -12.61961 -12.44831 -12.33302 -12.12685 -12.02640 -11.92440 -11.86614 -11.73852 -11.52758 -11.39703 -11.11259 -10.76662 -10.39787 -10.15139 -9.97636 -9.94447 -9.14473 -5.09195 -0.56388 -0.23741 0.34207 0.39984 0.51822 1.10403 1.46499 1.52790 1.82994 1.90111 2.18156 2.43930 2.86352 3.13405 3.21140 3.25092 3.34324 3.36283 3.61932 3.62953 3.70494 3.78392 3.86647 3.90292 3.92056 4.11362 4.13338 4.15802 4.20274 4.21976 4.26564 4.44746 4.46425 4.47114 4.50763 4.56980 4.63805 4.67156 4.73247 4.82249 4.87190 4.92796 5.00339 5.06236 5.10106 5.30805 5.35604 5.40602 5.47846 5.62021 5.83202 6.25896 6.29114 6.46140 7.03138 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.074 4.074 3 Si 0.680 3.320 4 C -0.117 4.117 5 C -0.017 4.017 6 C -0.128 4.128 7 C 0.562 3.438 8 O -0.525 6.525 9 N -0.716 5.716 10 C 0.124 3.876 11 H 0.121 0.879 12 C -0.136 4.136 13 C -0.107 4.107 14 H 0.109 0.891 15 C 0.072 3.928 16 O -0.312 6.312 17 C 0.129 3.871 18 C -0.211 4.211 19 C -0.081 4.081 20 C -0.159 4.159 21 C -0.080 4.080 22 C -0.153 4.153 23 C -0.145 4.145 24 C -0.054 4.054 25 C -0.094 4.094 26 Br -0.033 7.033 27 C -0.063 4.063 28 H 0.377 0.623 29 H 0.126 0.874 30 H -0.255 1.255 31 H -0.250 1.250 32 H 0.149 0.851 33 H 0.400 0.600 34 H 0.085 0.915 35 H 0.090 0.910 36 H 0.065 0.935 37 H 0.064 0.936 38 H 0.126 0.874 39 H 0.125 0.875 40 H 0.124 0.876 41 H 0.130 0.870 42 H 0.131 0.869 43 H 0.087 0.913 44 H 0.080 0.920 45 H 0.138 0.862 46 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.526 1.663 -3.646 5.338 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.184 4.184 3 Si 0.580 3.420 4 C -0.119 4.119 5 C -0.036 4.036 6 C -0.132 4.132 7 C 0.349 3.651 8 O -0.401 6.401 9 N -0.367 5.367 10 C 0.019 3.981 11 H 0.139 0.861 12 C -0.174 4.174 13 C -0.126 4.126 14 H 0.127 0.873 15 C -0.003 4.003 16 O -0.226 6.226 17 C 0.084 3.916 18 C -0.230 4.230 19 C -0.099 4.099 20 C -0.178 4.178 21 C -0.098 4.098 22 C -0.172 4.172 23 C -0.184 4.184 24 C -0.074 4.074 25 C -0.174 4.174 26 Br 0.053 6.947 27 C -0.083 4.083 28 H 0.225 0.775 29 H 0.144 0.856 30 H -0.180 1.180 31 H -0.175 1.175 32 H 0.167 0.833 33 H 0.236 0.764 34 H 0.103 0.897 35 H 0.109 0.891 36 H 0.083 0.917 37 H 0.082 0.918 38 H 0.144 0.856 39 H 0.143 0.857 40 H 0.142 0.858 41 H 0.148 0.852 42 H 0.148 0.852 43 H 0.106 0.894 44 H 0.098 0.902 45 H 0.156 0.844 46 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 3.176 2.052 -2.818 4.716 hybrid contribution -0.838 0.001 -0.922 1.246 sum 2.339 2.053 -3.741 4.866 Atomic orbital electron populations 1.86645 1.17165 1.79879 1.49355 1.25060 0.84350 1.11068 0.97887 0.95086 0.91626 0.74267 0.81048 1.20329 0.99241 0.94824 0.97481 1.21307 0.94377 0.92896 0.95055 1.19970 1.01827 0.94312 0.97131 1.18136 0.79639 0.85811 0.81473 1.90827 1.37154 1.67129 1.45024 1.45894 1.53406 1.12972 1.24438 1.22541 0.99743 0.79523 0.96280 0.86136 1.23360 1.02348 0.95637 0.96079 1.22384 0.97451 0.96506 0.96241 0.87332 1.22795 0.96639 0.82785 0.98120 1.86081 1.49032 1.33013 1.54494 1.19030 0.88408 0.92782 0.91376 1.21260 1.01264 1.01941 0.98501 1.20989 0.95237 0.94988 0.98650 1.21122 1.01896 0.96042 0.98694 1.21029 0.94661 0.99541 0.94580 1.20497 0.99858 0.93959 1.02866 1.23595 0.98834 0.97161 0.98766 1.21273 0.95184 0.92548 0.98416 1.21640 1.02988 0.95620 0.97146 1.96848 1.65718 1.75418 1.56696 1.21224 0.95157 0.99982 0.91929 0.77472 0.85613 1.17993 1.17457 0.83343 0.76367 0.89678 0.89128 0.91653 0.91788 0.85606 0.85742 0.85786 0.85234 0.85153 0.89434 0.90169 0.84429 0.84028 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.26 12.76 -35.23 -0.45 -0.71 16 2 C -0.07 0.09 2.82 36.01 0.10 0.19 16 3 Si 0.68 -1.23 29.78 -169.99 -5.06 -6.29 16 4 C -0.12 0.10 5.38 -104.68 -0.56 -0.47 16 5 C -0.02 -0.01 9.15 -39.19 -0.36 -0.37 16 6 C -0.13 -0.02 5.87 -104.97 -0.62 -0.63 16 7 C 0.56 0.84 7.77 -12.33 -0.10 0.75 16 8 O -0.52 -2.81 15.97 5.32 0.09 -2.73 16 9 N -0.72 1.02 5.31 -53.96 -0.29 0.74 16 10 C 0.12 -0.17 4.21 -67.12 -0.28 -0.45 16 11 H 0.12 0.04 7.50 -51.93 -0.39 -0.35 16 12 C -0.14 0.46 7.39 -25.92 -0.19 0.27 16 13 C -0.11 0.22 4.00 -89.72 -0.36 -0.14 16 14 H 0.11 -0.16 8.14 -51.93 -0.42 -0.59 16 15 C 0.07 -0.09 4.58 37.15 0.17 0.08 16 16 O -0.31 -0.57 10.14 -19.42 -0.20 -0.77 16 17 C 0.13 0.27 6.69 -39.21 -0.26 0.01 16 18 C -0.21 -0.19 9.04 -39.43 -0.36 -0.55 16 19 C -0.08 -0.05 10.04 -39.61 -0.40 -0.44 16 20 C -0.16 -0.10 10.04 -39.56 -0.40 -0.50 16 21 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16 22 C -0.15 -0.28 9.99 -39.43 -0.39 -0.67 16 23 C -0.14 0.19 7.45 -25.83 -0.19 0.00 16 24 C -0.05 0.08 9.28 -39.16 -0.36 -0.28 16 25 C -0.09 0.10 6.22 -39.58 -0.25 -0.14 16 26 Br -0.03 0.04 33.69 -68.01 -2.29 -2.26 16 27 C -0.06 0.08 8.41 -39.46 -0.33 -0.25 16 28 H 0.38 -0.90 8.70 45.56 0.40 -0.51 16 29 H 0.13 -0.24 7.96 -51.93 -0.41 -0.65 16 30 H -0.26 0.01 7.11 56.52 0.40 0.41 16 31 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 32 H 0.15 0.23 7.65 -52.48 -0.40 -0.17 16 33 H 0.40 -1.62 6.75 -40.82 -0.28 -1.89 16 34 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 35 H 0.09 -0.43 8.07 -51.93 -0.42 -0.85 16 36 H 0.07 -0.14 7.65 -51.93 -0.40 -0.53 16 37 H 0.06 -0.14 7.39 -51.93 -0.38 -0.52 16 38 H 0.13 -0.13 6.30 -52.49 -0.33 -0.46 16 39 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 40 H 0.12 -0.14 8.06 -52.48 -0.42 -0.57 16 41 H 0.13 -0.16 8.06 -52.48 -0.42 -0.58 16 42 H 0.13 0.11 8.06 -52.49 -0.42 -0.31 16 43 H 0.09 -0.15 7.91 -51.93 -0.41 -0.56 16 44 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 45 H 0.14 -0.54 6.41 -52.48 -0.34 -0.88 16 46 H 0.14 -0.38 4.86 -52.49 -0.26 -0.63 16 LS Contribution 404.04 15.07 6.09 6.09 Total: 0.00 -7.94 404.04 -13.42 -21.37 By element: Atomic # 1 Polarization: -5.60 SS G_CDS: -5.77 Total: -11.37 kcal Atomic # 6 Polarization: 1.47 SS G_CDS: -5.54 Total: -4.07 kcal Atomic # 7 Polarization: 1.02 SS G_CDS: -0.29 Total: 0.74 kcal Atomic # 8 Polarization: -3.64 SS G_CDS: -0.56 Total: -4.20 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.06 Total: -6.29 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -7.94 -13.42 -21.37 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_12335870.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.271 kcal (2) G-P(sol) polarization free energy of solvation -7.945 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.674 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.422 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.366 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.095 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds