Wall clock time and date at job start Sun Mar 7 2021 05:00:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.36423 * 125.79791 * 2 1 4 4 C 1.47382 * 127.19039 * 359.97438 * 3 2 1 5 5 O 1.21607 * 120.00020 * 0.02562 * 4 3 2 6 6 N 1.34778 * 119.99672 * 179.97438 * 4 3 2 7 7 C 1.46493 * 120.00144 * 179.97438 * 6 4 3 8 8 H 1.09006 * 112.84752 * 336.19860 * 7 6 4 9 9 C 1.53779 * 113.61724 * 107.50186 * 7 6 4 10 10 C 1.53776 * 87.08232 * 139.98396 * 9 7 6 11 11 H 1.09000 * 113.61622 * 89.11818 * 10 9 7 12 12 C 1.53005 * 113.68907 * 220.01062 * 10 9 7 13 13 O 1.42901 * 109.46864 * 272.53261 * 12 10 9 14 14 C 1.35900 * 116.99688 * 180.02562 * 13 12 10 15 15 C 1.38735 * 120.05731 * 359.73085 * 14 13 12 16 16 C 1.38143 * 119.94505 * 179.70351 * 15 14 13 17 17 C 1.38267 * 120.05402 * 0.59082 * 16 15 14 18 18 C 1.38270 * 120.11248 * 359.68031 * 17 16 15 19 19 C 1.38146 * 120.05262 * 0.02562 * 18 17 16 20 20 C 1.53782 * 113.61582 * 205.00305 * 7 6 4 21 21 C 1.47017 * 105.61251 * 179.97438 * 3 2 1 22 22 C 1.34178 * 105.95666 * 359.97438 * 21 3 2 23 23 C 1.50701 * 125.43760 * 180.02562 * 22 21 3 24 24 O 1.42903 * 109.47027 * 300.00178 * 23 22 21 25 25 Si 1.86304 * 109.46992 * 180.02562 * 23 22 21 26 26 O 1.33644 * 125.80477 * 179.68884 * 2 1 3 27 27 H 1.08999 * 109.47015 * 90.00363 * 1 2 3 28 28 H 1.09000 * 109.46646 * 209.99516 * 1 2 3 29 29 H 1.09000 * 109.47248 * 330.00233 * 1 2 3 30 30 H 0.97001 * 119.99955 * 0.02562 * 6 4 3 31 31 H 1.09001 * 113.61705 * 254.53770 * 9 7 6 32 32 H 1.08998 * 113.61347 * 25.43208 * 9 7 6 33 33 H 1.08995 * 109.46965 * 32.53391 * 12 10 9 34 34 H 1.09002 * 109.46768 * 152.53457 * 12 10 9 35 35 H 1.08000 * 120.02550 * 359.97438 * 15 14 13 36 36 H 1.08000 * 119.97505 * 180.27761 * 16 15 14 37 37 H 1.08004 * 119.94800 * 179.70794 * 17 16 15 38 38 H 1.07994 * 119.97249 * 180.02562 * 18 17 16 39 39 H 1.07999 * 120.02737 * 180.02562 * 19 18 17 40 40 H 1.08990 * 113.61353 * 334.56158 * 20 7 6 41 41 H 1.08997 * 113.61380 * 105.39057 * 20 7 6 42 42 H 1.08002 * 127.02220 * 180.02562 * 21 3 2 43 43 H 1.08998 * 109.47127 * 60.00549 * 23 22 21 44 44 H 0.96702 * 113.99788 * 180.02562 * 24 23 22 45 45 H 1.48499 * 110.00152 * 59.99895 * 25 23 22 46 46 H 1.48499 * 110.00004 * 181.31950 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3050 1.1065 0.0000 4 6 1.8738 2.5158 -0.0005 5 8 0.6889 2.7892 -0.0006 6 7 2.7929 3.5017 0.0001 7 6 2.3644 4.9025 -0.0010 8 1 1.3622 5.0383 -0.4076 9 6 2.5879 5.6162 1.3427 10 6 3.0273 6.8441 0.5279 11 1 2.2060 7.5116 0.2669 12 6 4.2258 7.5827 1.1270 13 8 3.7653 8.5478 2.0749 14 6 4.7105 9.2957 2.7027 15 6 6.0539 9.1007 2.4165 16 6 7.0125 9.8665 3.0515 17 6 6.6346 10.8182 3.9806 18 6 5.2967 11.0106 4.2718 19 6 4.3340 10.2516 3.6350 20 6 3.4060 5.8649 -0.5958 21 6 3.6849 0.5992 0.0006 22 6 3.5860 -0.7389 0.0015 23 6 4.7460 -1.7009 0.0030 24 8 5.5435 -1.4871 -1.1634 25 14 4.1028 -3.4494 0.0030 26 8 2.2889 -1.0839 0.0059 27 1 -0.3633 -0.0001 -1.0277 28 1 -0.3632 -0.8901 0.5138 29 1 -0.3634 0.8900 0.5138 30 1 3.7381 3.2836 0.0005 31 1 1.6713 5.7743 1.9109 32 1 3.3879 5.1801 1.9409 33 1 4.8810 6.8681 1.6251 34 1 4.7757 8.0873 0.3326 35 1 6.3499 8.3539 1.6946 36 1 8.0581 9.7182 2.8257 37 1 7.3858 11.4127 4.4795 38 1 5.0041 11.7548 4.9975 39 1 3.2891 10.4025 3.8624 40 1 4.4296 5.4968 -0.5275 41 1 3.1504 6.2228 -1.5931 42 1 4.5928 1.1841 0.0012 43 1 5.3530 -1.5367 0.8933 44 1 6.3097 -2.0734 -1.2288 45 1 3.2738 -3.6856 -1.2061 46 1 5.2367 -4.4076 0.0366 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16536076_13308374.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:00:32 Heat of formation + Delta-G solvation = -34.126949 kcal Electronic energy + Delta-G solvation = -28541.420232 eV Core-core repulsion = 24365.705140 eV Total energy + Delta-G solvation = -4175.715092 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.150 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -43.69814 -41.38082 -40.71535 -39.33583 -38.17594 -38.03910 -34.75930 -33.90922 -33.14514 -31.98779 -31.03288 -29.64240 -28.97721 -26.84001 -26.03606 -24.78494 -23.79033 -23.26244 -22.62510 -21.67133 -21.24230 -20.22846 -19.14883 -18.92088 -18.36121 -17.63972 -17.29387 -17.02019 -16.93996 -16.87573 -16.44657 -16.17929 -15.94274 -15.73309 -15.51753 -15.28905 -14.86246 -14.40460 -14.29008 -14.18721 -14.06852 -14.00410 -13.96987 -13.82611 -13.62355 -13.27979 -13.15841 -12.98670 -12.63888 -12.56101 -12.38677 -12.11692 -12.05691 -11.86413 -11.69925 -11.33844 -10.97692 -10.83116 -10.67548 -10.02816 -9.92789 -9.50140 -9.12491 -5.03982 0.33768 0.41591 0.53564 0.83593 1.09687 1.34505 1.64837 1.89790 2.06425 2.30371 2.38413 2.88012 3.16534 3.32963 3.39929 3.41476 3.68307 3.70466 3.76229 3.80724 3.89258 3.94456 4.08313 4.15658 4.18311 4.22026 4.23788 4.29960 4.44060 4.48167 4.54121 4.54572 4.58865 4.63247 4.65393 4.71535 4.76493 4.85688 4.90700 4.98729 5.08141 5.13317 5.21367 5.26243 5.37625 5.49434 5.53889 5.63465 5.85084 5.97605 6.19757 6.48426 6.52545 7.26831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.097 3.903 3 C -0.254 4.254 4 C 0.595 3.405 5 O -0.539 6.539 6 N -0.715 5.715 7 C 0.125 3.875 8 H 0.120 0.880 9 C -0.145 4.145 10 C -0.107 4.107 11 H 0.108 0.892 12 C 0.072 3.928 13 O -0.312 6.312 14 C 0.130 3.870 15 C -0.211 4.211 16 C -0.081 4.081 17 C -0.160 4.160 18 C -0.080 4.080 19 C -0.153 4.153 20 C -0.137 4.137 21 C -0.146 4.146 22 C -0.009 4.009 23 C -0.037 4.037 24 O -0.534 6.534 25 Si 0.699 3.301 26 O -0.167 6.167 27 H 0.092 0.908 28 H 0.083 0.917 29 H 0.111 0.889 30 H 0.401 0.599 31 H 0.078 0.922 32 H 0.086 0.914 33 H 0.064 0.936 34 H 0.065 0.935 35 H 0.126 0.874 36 H 0.124 0.876 37 H 0.124 0.876 38 H 0.130 0.870 39 H 0.131 0.869 40 H 0.089 0.911 41 H 0.083 0.917 42 H 0.157 0.843 43 H 0.097 0.903 44 H 0.389 0.611 45 H -0.252 1.252 46 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.894 -1.605 1.771 4.569 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.044 3.956 3 C -0.259 4.259 4 C 0.384 3.616 5 O -0.417 6.417 6 N -0.365 5.365 7 C 0.021 3.979 8 H 0.138 0.862 9 C -0.183 4.183 10 C -0.126 4.126 11 H 0.126 0.874 12 C -0.003 4.003 13 O -0.226 6.226 14 C 0.084 3.916 15 C -0.230 4.230 16 C -0.099 4.099 17 C -0.178 4.178 18 C -0.098 4.098 19 C -0.172 4.172 20 C -0.175 4.175 21 C -0.166 4.166 22 C -0.057 4.057 23 C -0.146 4.146 24 O -0.342 6.342 25 Si 0.598 3.402 26 O -0.064 6.064 27 H 0.110 0.890 28 H 0.102 0.898 29 H 0.130 0.870 30 H 0.236 0.764 31 H 0.097 0.903 32 H 0.105 0.895 33 H 0.082 0.918 34 H 0.083 0.917 35 H 0.144 0.856 36 H 0.142 0.858 37 H 0.142 0.858 38 H 0.148 0.852 39 H 0.149 0.851 40 H 0.108 0.892 41 H 0.102 0.898 42 H 0.174 0.826 43 H 0.115 0.885 44 H 0.238 0.762 45 H -0.175 1.175 46 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges 2.276 -2.037 1.244 3.298 hybrid contribution 2.077 0.210 -0.718 2.207 sum 4.353 -1.827 0.526 4.750 Atomic orbital electron populations 1.20711 0.83211 1.05521 1.04786 1.22914 0.94038 0.82720 0.95919 1.21108 0.93193 0.93825 1.17741 1.17188 0.85452 0.83721 0.75250 1.90772 1.16518 1.84001 1.50426 1.45738 1.09621 1.05577 1.75546 1.22485 0.99850 0.78664 0.96948 0.86177 1.23560 1.02756 0.94990 0.97034 1.22360 0.98199 0.95281 0.96747 0.87376 1.22807 0.96831 0.89988 0.90707 1.86083 1.33595 1.48806 1.54117 1.19036 0.87706 0.91834 0.92993 1.21266 0.92228 1.04351 1.05143 1.20988 0.99187 0.94558 0.95135 1.21120 0.96299 1.00232 1.00143 1.21028 0.92592 0.97985 0.98213 1.20496 1.00746 0.97457 0.98494 1.23366 0.99794 0.95502 0.98835 1.22506 0.96398 0.93414 1.04253 1.20924 0.82122 0.94079 1.08569 1.23774 0.90931 1.08837 0.91047 1.86551 1.42491 1.62416 1.42787 0.94410 0.83510 0.72926 0.89404 1.83641 1.16138 1.35119 1.71538 0.88977 0.89840 0.87027 0.76413 0.90274 0.89536 0.91822 0.91695 0.85609 0.85758 0.85800 0.85241 0.85148 0.89242 0.89812 0.82562 0.88520 0.76188 1.17540 1.17628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.02 9.89 36.01 0.36 0.33 16 2 C 0.10 0.22 7.37 -34.96 -0.26 -0.04 16 3 C -0.25 -0.63 6.31 -103.27 -0.65 -1.28 16 4 C 0.60 1.81 7.81 -12.54 -0.10 1.71 16 5 O -0.54 -3.08 14.44 5.27 0.08 -3.00 16 6 N -0.71 -0.11 5.35 -54.11 -0.29 -0.40 16 7 C 0.13 -0.04 4.24 -67.12 -0.28 -0.33 16 8 H 0.12 0.14 7.46 -51.93 -0.39 -0.25 16 9 C -0.14 0.08 7.43 -25.92 -0.19 -0.11 16 10 C -0.11 0.14 4.01 -89.80 -0.36 -0.22 16 11 H 0.11 -0.10 8.14 -51.93 -0.42 -0.52 16 12 C 0.07 -0.05 4.58 37.16 0.17 0.12 16 13 O -0.31 -0.70 10.14 -19.43 -0.20 -0.89 16 14 C 0.13 0.32 6.69 -39.22 -0.26 0.05 16 15 C -0.21 -0.27 9.04 -39.43 -0.36 -0.63 16 16 C -0.08 -0.07 10.04 -39.61 -0.40 -0.47 16 17 C -0.16 -0.13 10.04 -39.56 -0.40 -0.53 16 18 C -0.08 -0.08 10.04 -39.60 -0.40 -0.48 16 19 C -0.15 -0.31 9.99 -39.43 -0.39 -0.71 16 20 C -0.14 0.32 7.39 -25.92 -0.19 0.13 16 21 C -0.15 -0.16 10.46 -37.46 -0.39 -0.56 16 22 C -0.01 -0.01 6.24 -35.74 -0.22 -0.24 16 23 C -0.04 0.04 2.97 36.01 0.11 0.14 16 24 O -0.53 0.11 12.84 -35.23 -0.45 -0.34 16 25 Si 0.70 -0.80 32.08 -169.99 -5.45 -6.26 16 26 O -0.17 -0.36 8.89 7.67 0.07 -0.29 16 27 H 0.09 -0.02 8.14 -51.93 -0.42 -0.45 16 28 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 29 H 0.11 0.15 6.49 -51.93 -0.34 -0.19 16 30 H 0.40 -0.82 7.90 -40.82 -0.32 -1.14 16 31 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 32 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 33 H 0.06 -0.10 7.36 -51.93 -0.38 -0.48 16 34 H 0.06 -0.10 7.67 -51.93 -0.40 -0.49 16 35 H 0.13 -0.07 6.30 -52.49 -0.33 -0.41 16 36 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 37 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 38 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 39 H 0.13 0.14 8.06 -52.49 -0.42 -0.28 16 40 H 0.09 -0.32 8.08 -51.93 -0.42 -0.74 16 41 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 42 H 0.16 -0.19 7.74 -52.49 -0.41 -0.59 16 43 H 0.10 -0.34 7.96 -51.93 -0.41 -0.75 16 44 H 0.39 -1.78 8.74 45.56 0.40 -1.38 16 45 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16 46 H -0.25 0.01 7.11 56.52 0.40 0.41 16 LS Contribution 389.03 15.07 5.86 5.86 Total: 0.00 -8.69 389.03 -11.02 -19.71 By element: Atomic # 1 Polarization: -4.88 SS G_CDS: -6.41 Total: -11.29 kcal Atomic # 6 Polarization: 1.14 SS G_CDS: -4.22 Total: -3.09 kcal Atomic # 7 Polarization: -0.11 SS G_CDS: -0.29 Total: -0.40 kcal Atomic # 8 Polarization: -4.03 SS G_CDS: -0.50 Total: -4.53 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.45 Total: -6.26 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -8.69 -11.02 -19.71 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_13308374.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.420 kcal (2) G-P(sol) polarization free energy of solvation -8.686 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.106 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.021 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.707 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.127 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds