Wall clock time and date at job start Sun Mar 7 2021 05:01:27
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* DEV - DEVELOPER OPTIONS ARE ALLOWED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS USER-SPECIFIED
* DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06
* IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345
* ALPHA - THE SOLVENT ALPHA IS 0.00
* BETA - THE SOLVENT BETA IS 0.00
* GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS
* 38.93 CAL MOL^-1 ANGSTROM^-2
* FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00
* FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 O
2 2 C 1.42902 * 1
3 3 Si 1.86304 * 109.46875 * 2 1
4 4 C 1.50697 * 109.46958 * 240.00383 * 2 1 3
5 5 C 1.38708 * 120.02761 * 284.99588 * 4 2 1
6 6 O 1.35900 * 120.05751 * 0.02562 * 5 4 2
7 7 C 1.42894 * 117.00370 * 180.02562 * 6 5 4
8 8 C 1.50699 * 109.47583 * 179.97438 * 7 6 5
9 9 O 1.21283 * 119.99341 * 359.97438 * 8 7 6
10 10 N 1.34776 * 120.00405 * 180.02562 * 8 7 6
11 11 C 1.46499 * 119.99941 * 180.02562 * 10 8 7
12 12 H 1.09000 * 112.85388 * 23.79874 * 11 10 8
13 13 C 1.53786 * 113.61357 * 154.99692 * 11 10 8
14 14 C 1.53780 * 87.08000 * 139.97941 * 13 11 10
15 15 H 1.09001 * 113.61568 * 89.19819 * 14 13 11
16 16 C 1.53002 * 113.61215 * 220.02061 * 14 13 11
17 17 O 1.42904 * 109.46919 * 185.00001 * 16 14 13
18 18 C 1.35897 * 116.99895 * 180.02562 * 17 16 14
19 19 C 1.38733 * 120.05580 * 359.71921 * 18 17 16
20 20 C 1.38152 * 119.94065 * 179.70342 * 19 18 17
21 21 C 1.38262 * 120.05492 * 0.59907 * 20 19 18
22 22 C 1.38262 * 120.11330 * 359.67812 * 21 20 19
23 23 C 1.38146 * 120.05603 * 0.02562 * 22 21 20
24 24 C 1.53784 * 113.60979 * 252.49337 * 11 10 8
25 25 C 1.38759 * 119.89010 * 180.02562 * 5 4 2
26 26 C 1.38119 * 119.94381 * 0.02562 * 25 5 4
27 27 C 1.38295 * 120.05704 * 359.97438 * 26 25 5
28 28 C 1.38171 * 120.03194 * 104.99815 * 4 2 1
29 29 H 0.96696 * 114.00159 * 299.99987 * 1 2 3
30 30 H 1.08995 * 109.47335 * 119.99982 * 2 1 3
31 31 H 1.48500 * 109.99981 * 178.68127 * 3 2 1
32 32 H 1.48499 * 110.00192 * 300.00223 * 3 2 1
33 33 H 1.09001 * 109.47181 * 300.00095 * 7 6 5
34 34 H 1.08998 * 109.47333 * 59.99666 * 7 6 5
35 35 H 0.97002 * 119.99581 * 359.97438 * 10 8 7
36 36 H 1.09000 * 113.61172 * 254.52470 * 13 11 10
37 37 H 1.09000 * 113.61382 * 25.34489 * 13 11 10
38 38 H 1.08995 * 109.47015 * 304.99688 * 16 14 13
39 39 H 1.08994 * 109.47015 * 65.00168 * 16 14 13
40 40 H 1.07997 * 120.02697 * 0.02562 * 19 18 17
41 41 H 1.07995 * 119.96564 * 180.32099 * 20 19 18
42 42 H 1.08000 * 119.93864 * 179.70101 * 21 20 19
43 43 H 1.08005 * 119.97262 * 179.97438 * 22 21 20
44 44 H 1.08002 * 120.02581 * 179.97438 * 23 22 21
45 45 H 1.08996 * 113.61765 * 334.56414 * 24 11 10
46 46 H 1.08996 * 113.61343 * 105.47750 * 24 11 10
47 47 H 1.08001 * 120.03003 * 179.97438 * 25 5 4
48 48 H 1.07997 * 119.97310 * 179.97438 * 26 25 5
49 49 H 1.07995 * 119.94657 * 179.74935 * 27 26 25
50 50 H 1.08005 * 119.97011 * 359.97438 * 28 4 2
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 8 0.0000 0.0000 0.0000
2 6 1.4290 0.0000 0.0000
3 14 2.0500 1.7565 0.0000
4 6 1.9313 -0.7103 -1.2305
5 6 1.8697 -2.0939 -1.3070
6 8 1.3560 -2.8106 -0.2730
7 6 1.3244 -4.2316 -0.4208
8 6 0.7270 -4.8522 0.8157
9 8 0.3645 -4.1471 1.7335
10 7 0.5966 -6.1909 0.9022
11 6 0.0154 -6.7941 2.1040
12 1 -0.6294 -6.1076 2.6528
13 6 -0.6214 -8.1717 1.8555
14 6 -0.0214 -8.6047 3.2036
15 1 -0.6763 -8.4150 4.0541
16 6 0.5438 -10.0265 3.1945
17 8 0.9699 -10.3782 4.5124
18 6 1.5012 -11.6179 4.6788
19 6 1.6048 -12.4803 3.5971
20 6 2.1510 -13.7378 3.7676
21 6 2.5826 -14.1415 5.0176
22 6 2.4751 -13.2860 6.0984
23 6 1.9353 -12.0253 5.9318
24 6 1.0442 -7.5168 2.9896
25 6 2.3335 -2.7451 -2.4412
26 6 2.8557 -2.0145 -3.4906
27 6 2.9160 -0.6351 -3.4119
28 6 2.4537 0.0160 -2.2834
29 1 -0.3933 0.4417 0.7650
30 1 1.7924 -0.5138 0.8899
31 1 3.5346 1.7704 0.0321
32 1 1.5614 2.4680 -1.2084
33 1 0.7183 -4.4932 -1.2882
34 1 2.3388 -4.6050 -0.5605
35 1 0.8869 -6.7548 0.1682
36 1 -1.7112 -8.1540 1.8482
37 1 -0.2008 -8.6991 0.9993
38 1 -0.2277 -10.7220 2.8643
39 1 1.3930 -10.0754 2.5129
40 1 1.2637 -12.1670 2.6215
41 1 2.2366 -14.4075 2.9248
42 1 3.0048 -15.1267 5.1498
43 1 2.8126 -13.6039 7.0738
44 1 1.8512 -11.3575 6.7765
45 1 1.9211 -7.8658 2.4443
46 1 1.2989 -6.9705 3.8977
47 1 2.2870 -3.8223 -2.5030
48 1 3.2172 -2.5208 -4.3733
49 1 3.3284 -0.0658 -4.2318
50 1 2.5015 1.0934 -2.2245
There are 68 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 68
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93
& DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV
s_22_16536076_2989392.mol2 50
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Sun Mar 7 2021 05:01:27
Heat of formation + Delta-G solvation = -50.869752 kcal
Electronic energy + Delta-G solvation = -31578.771064 eV
Core-core repulsion = 27118.566191 eV
Total energy + Delta-G solvation = -4460.204874 eV
No. of doubly occupied orbitals = 68
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 370.166 amu
Computer time = 1.33 seconds
Orbital eigenvalues (eV)
-41.71104 -41.31663 -40.77077 -39.59304 -38.40078 -38.01560 -37.33756 -34.79225
-32.88243 -32.03743 -31.43168 -31.04973 -29.86919 -28.65320 -26.92211 -26.56833
-24.68540 -23.65764 -23.26227 -22.58465 -22.40396 -21.67576 -20.77415 -19.36399
-19.20655 -18.29018 -18.23669 -17.74390 -17.41164 -17.15346 -16.98074 -16.90326
-16.80253 -16.41637 -16.17429 -15.65337 -15.45135 -15.44504 -15.25902 -14.95936
-14.71299 -14.40832 -14.28971 -14.14679 -13.95500 -13.72815 -13.70599 -13.56666
-13.31707 -13.07128 -12.94292 -12.69480 -12.62295 -12.45431 -12.21668 -12.10219
-11.92939 -11.85398 -11.75037 -11.70106 -11.40396 -10.87498 -10.18564 -10.11428
-10.01304 -9.95589 -9.23221 -9.15684 -4.90292 0.17919 0.38047 0.38759
0.50675 1.37737 1.41824 1.45497 1.70417 2.01822 2.11610 2.54380
2.63272 2.85171 3.23087 3.33018 3.43950 3.53000 3.60626 3.62752
3.71572 3.80035 3.85338 3.88810 3.90450 3.91227 4.09157 4.10213
4.14957 4.19524 4.22796 4.25503 4.29968 4.45282 4.45574 4.46553
4.50013 4.56379 4.60978 4.63618 4.72284 4.81462 4.91614 4.93786
5.05010 5.08898 5.22017 5.30384 5.34275 5.37857 5.44302 5.46657
5.60874 5.64564 5.82061 6.20139 6.34962 6.44983 6.82958 7.06476
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 O -0.541 6.541
2 C -0.062 4.062
3 Si 0.683 3.317
4 C -0.102 4.102
5 C 0.153 3.847
6 O -0.277 6.277
7 C 0.038 3.962
8 C 0.518 3.482
9 O -0.508 6.508
10 N -0.719 5.719
11 C 0.126 3.874
12 H 0.121 0.879
13 C -0.136 4.136
14 C -0.107 4.107
15 H 0.109 0.891
16 C 0.072 3.928
17 O -0.313 6.313
18 C 0.129 3.871
19 C -0.211 4.211
20 C -0.081 4.081
21 C -0.159 4.159
22 C -0.080 4.080
23 C -0.153 4.153
24 C -0.145 4.145
25 C -0.211 4.211
26 C -0.072 4.072
27 C -0.151 4.151
28 C -0.084 4.084
29 H 0.380 0.620
30 H 0.074 0.926
31 H -0.255 1.255
32 H -0.250 1.250
33 H 0.094 0.906
34 H 0.093 0.907
35 H 0.402 0.598
36 H 0.084 0.916
37 H 0.090 0.910
38 H 0.065 0.935
39 H 0.064 0.936
40 H 0.126 0.874
41 H 0.125 0.875
42 H 0.124 0.876
43 H 0.130 0.870
44 H 0.131 0.869
45 H 0.087 0.913
46 H 0.079 0.921
47 H 0.132 0.868
48 H 0.131 0.869
49 H 0.129 0.871
50 H 0.128 0.872
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges 0.959 -3.592 -2.032 4.237
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 O -0.347 6.347
2 C -0.173 4.173
3 Si 0.584 3.416
4 C -0.103 4.103
5 C 0.107 3.893
6 O -0.189 6.189
7 C -0.041 4.041
8 C 0.303 3.697
9 O -0.381 6.381
10 N -0.372 5.372
11 C 0.021 3.979
12 H 0.139 0.861
13 C -0.174 4.174
14 C -0.126 4.126
15 H 0.127 0.873
16 C -0.003 4.003
17 O -0.226 6.226
18 C 0.084 3.916
19 C -0.230 4.230
20 C -0.099 4.099
21 C -0.177 4.177
22 C -0.098 4.098
23 C -0.172 4.172
24 C -0.184 4.184
25 C -0.229 4.229
26 C -0.090 4.090
27 C -0.169 4.169
28 C -0.101 4.101
29 H 0.227 0.773
30 H 0.092 0.908
31 H -0.179 1.179
32 H -0.175 1.175
33 H 0.112 0.888
34 H 0.111 0.889
35 H 0.237 0.763
36 H 0.103 0.897
37 H 0.109 0.891
38 H 0.083 0.917
39 H 0.082 0.918
40 H 0.144 0.856
41 H 0.143 0.857
42 H 0.142 0.858
43 H 0.148 0.852
44 H 0.149 0.851
45 H 0.105 0.895
46 H 0.098 0.902
47 H 0.149 0.851
48 H 0.149 0.851
49 H 0.147 0.853
50 H 0.145 0.855
Dipole moment (debyes) X Y Z Total
from point charges 1.151 -2.529 -2.013 3.431
hybrid contribution 0.317 -1.293 -1.061 1.702
sum 1.468 -3.821 -3.074 5.119
Atomic orbital electron populations
1.86497 1.17061 1.81936 1.49246 1.24519 0.85953 1.09649 0.97141
0.95215 0.80844 0.78471 0.87036 1.18687 1.04542 0.90379 0.96693
1.18747 0.93028 0.90688 0.86832 1.86211 1.77408 1.16812 1.38437
1.22492 1.02503 0.81434 0.97694 1.20039 0.78993 0.82566 0.88149
1.90784 1.47177 1.61049 1.39115 1.45794 1.64594 1.06212 1.20596
1.22523 0.95905 0.93308 0.86141 0.86113 1.23368 1.01768 0.95242
0.97027 1.22361 0.98851 0.92304 0.99086 0.87298 1.22799 0.98690
0.96009 0.82833 1.86083 1.75483 1.29535 1.31526 1.19029 0.94033
0.84242 0.94297 1.21262 1.07255 0.96013 0.98455 1.20990 0.96147
0.95210 0.97532 1.21121 1.03197 1.00464 0.92968 1.21032 0.96868
0.92695 0.99207 1.20500 1.03659 0.97584 0.95432 1.23573 0.97383
0.96690 1.00766 1.21288 1.06379 1.00466 0.94816 1.21014 0.96348
0.93914 0.97757 1.21038 1.02778 0.94719 0.98359 1.20886 0.97327
0.99257 0.92668 0.77281 0.90770 1.17949 1.17534 0.88774 0.88886
0.76317 0.89708 0.89122 0.91655 0.91823 0.85616 0.85746 0.85781
0.85221 0.85137 0.89463 0.90211 0.85062 0.85144 0.85257 0.85453
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 13.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 O -0.54 -1.82 12.86 -35.23 -0.45 -2.27 16
2 C -0.06 -0.17 2.37 36.00 0.09 -0.09 16
3 Si 0.68 0.38 30.20 -169.99 -5.13 -4.75 16
4 C -0.10 -0.43 5.30 -104.47 -0.55 -0.98 16
5 C 0.15 0.55 6.66 -39.22 -0.26 0.29 16
6 O -0.28 -1.11 9.00 -39.34 -0.35 -1.47 16
7 C 0.04 -0.01 5.22 36.01 0.19 0.18 16
8 C 0.52 0.79 7.91 -10.99 -0.09 0.70 16
9 O -0.51 -3.26 16.10 -14.36 -0.23 -3.49 16
10 N -0.72 1.38 5.35 -53.01 -0.28 1.10 16
11 C 0.13 -0.18 4.24 -67.11 -0.28 -0.47 16
12 H 0.12 0.06 7.47 -51.93 -0.39 -0.33 16
13 C -0.14 0.47 7.39 -25.92 -0.19 0.28 16
14 C -0.11 0.22 4.01 -89.80 -0.36 -0.14 16
15 H 0.11 -0.16 8.14 -51.93 -0.42 -0.59 16
16 C 0.07 -0.10 4.58 37.16 0.17 0.07 16
17 O -0.31 -0.56 10.14 -19.42 -0.20 -0.76 16
18 C 0.13 0.27 6.69 -39.22 -0.26 0.00 16
19 C -0.21 -0.18 9.04 -39.43 -0.36 -0.54 16
20 C -0.08 -0.04 10.04 -39.60 -0.40 -0.44 16
21 C -0.16 -0.09 10.04 -39.56 -0.40 -0.49 16
22 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16
23 C -0.15 -0.27 9.99 -39.43 -0.39 -0.66 16
24 C -0.15 0.21 7.43 -25.91 -0.19 0.01 16
25 C -0.21 -0.24 9.04 -39.43 -0.36 -0.59 16
26 C -0.07 -0.05 10.04 -39.60 -0.40 -0.45 16
27 C -0.15 -0.25 10.04 -39.56 -0.40 -0.64 16
28 C -0.08 -0.27 8.66 -39.61 -0.34 -0.61 16
29 H 0.38 -0.57 8.74 45.56 0.40 -0.17 16
30 H 0.07 0.21 7.83 -51.93 -0.41 -0.20 16
31 H -0.25 -0.72 7.11 56.52 0.40 -0.32 16
32 H -0.25 -0.71 6.75 56.52 0.38 -0.33 16
33 H 0.09 -0.24 7.66 -51.93 -0.40 -0.64 16
34 H 0.09 -0.27 7.66 -51.93 -0.40 -0.67 16
35 H 0.40 -2.08 8.73 -40.82 -0.36 -2.44 16
36 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16
37 H 0.09 -0.45 8.08 -51.93 -0.42 -0.87 16
38 H 0.07 -0.14 7.65 -51.93 -0.40 -0.54 16
39 H 0.06 -0.14 7.37 -51.93 -0.38 -0.53 16
40 H 0.13 -0.14 6.30 -52.49 -0.33 -0.47 16
41 H 0.12 -0.18 8.06 -52.49 -0.42 -0.61 16
42 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16
43 H 0.13 -0.17 8.06 -52.48 -0.42 -0.59 16
44 H 0.13 0.11 8.06 -52.49 -0.42 -0.32 16
45 H 0.09 -0.17 7.90 -51.93 -0.41 -0.58 16
46 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16
47 H 0.13 -0.25 6.30 -52.49 -0.33 -0.58 16
48 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16
49 H 0.13 -0.06 8.06 -52.49 -0.42 -0.49 16
50 H 0.13 0.32 4.90 -52.48 -0.26 0.06 16
LS Contribution 415.58 15.07 6.26 6.26
Total: 0.00 -11.26 415.58 -12.68 -23.93
By element:
Atomic # 1 Polarization: -6.45 SS G_CDS: -7.10 Total: -13.55 kcal
Atomic # 6 Polarization: 0.17 SS G_CDS: -5.19 Total: -5.02 kcal
Atomic # 7 Polarization: 1.38 SS G_CDS: -0.28 Total: 1.10 kcal
Atomic # 8 Polarization: -6.74 SS G_CDS: -1.23 Total: -7.98 kcal
Atomic # 14 Polarization: 0.38 SS G_CDS: -5.13 Total: -4.75 kcal
Total LS contribution 6.26 Total: 6.26 kcal
Total: -11.26 -12.68 -23.93 kcal
The number of atoms in the molecule is 50
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
s_22_16536076_2989392.mol2 50
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -26.937 kcal
(2) G-P(sol) polarization free energy of solvation -11.257 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.194 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.676 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.933 kcal
(6) G-S(sol) free energy of system = (1) + (5) -50.870 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 1.33 seconds