Wall clock time and date at job start Sun Mar 7 2021 05:02:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35997 * 117.00276 * 2 1 4 4 C 1.39153 * 120.07471 * 179.97438 * 3 2 1 5 5 O 1.35991 * 120.07521 * 359.97438 * 4 3 2 6 6 C 1.42895 * 117.00073 * 179.97438 * 5 4 3 7 7 C 1.50703 * 109.47034 * 180.02562 * 6 5 4 8 8 O 1.21278 * 120.00183 * 0.02562 * 7 6 5 9 9 N 1.34783 * 119.99755 * 179.97438 * 7 6 5 10 10 C 1.46499 * 119.99531 * 180.02562 * 9 7 6 11 11 H 1.08996 * 112.85385 * 23.80181 * 10 9 7 12 12 C 1.53781 * 113.61225 * 155.00207 * 10 9 7 13 13 C 1.53786 * 87.17350 * 139.93836 * 12 10 9 14 14 H 1.08993 * 113.61491 * 89.15923 * 13 12 10 15 15 C 1.52999 * 113.61361 * 220.06273 * 13 12 10 16 16 O 1.42904 * 109.47219 * 184.99801 * 15 13 12 17 17 C 1.35896 * 116.99838 * 180.02562 * 16 15 13 18 18 C 1.38732 * 120.06035 * 359.72451 * 17 16 15 19 19 C 1.38147 * 119.94677 * 179.70358 * 18 17 16 20 20 C 1.38266 * 120.05212 * 0.59610 * 19 18 17 21 21 C 1.38269 * 120.11191 * 359.67614 * 20 19 18 22 22 C 1.38141 * 120.05797 * 0.02669 * 21 20 19 23 23 C 1.53782 * 113.61191 * 252.49880 * 10 9 7 24 24 C 1.38570 * 119.84999 * 180.25026 * 4 3 2 25 25 C 1.38239 * 120.00181 * 359.47864 * 24 4 3 26 26 C 1.38256 * 120.14301 * 0.50465 * 25 24 4 27 27 C 1.50706 * 119.92302 * 179.74988 * 26 25 24 28 28 O 1.42900 * 109.46842 * 245.01688 * 27 26 25 29 29 Si 1.86299 * 109.47157 * 5.01783 * 27 26 25 30 30 C 1.38237 * 120.15066 * 359.76327 * 26 25 24 31 31 H 1.09001 * 109.47694 * 59.99735 * 1 2 3 32 32 H 1.09005 * 109.47619 * 180.02562 * 1 2 3 33 33 H 1.09001 * 109.47352 * 299.99592 * 1 2 3 34 34 H 1.08994 * 109.47399 * 59.99980 * 6 5 4 35 35 H 1.09007 * 109.47181 * 299.99958 * 6 5 4 36 36 H 0.96997 * 119.99692 * 0.02562 * 9 7 6 37 37 H 1.09002 * 113.61445 * 254.52836 * 12 10 9 38 38 H 1.09002 * 113.61408 * 25.34566 * 12 10 9 39 39 H 1.09002 * 109.47053 * 305.00261 * 15 13 12 40 40 H 1.09004 * 109.47121 * 64.99898 * 15 13 12 41 41 H 1.08004 * 120.02355 * 359.97438 * 18 17 16 42 42 H 1.07991 * 119.97326 * 180.31799 * 19 18 17 43 43 H 1.07997 * 119.94443 * 179.70512 * 20 19 18 44 44 H 1.08002 * 119.96712 * 180.02562 * 21 20 19 45 45 H 1.07997 * 120.03511 * 179.97438 * 22 21 20 46 46 H 1.08997 * 113.61668 * 334.56642 * 23 10 9 47 47 H 1.08998 * 113.61674 * 105.39151 * 23 10 9 48 48 H 1.07999 * 119.99755 * 179.72137 * 24 4 3 49 49 H 1.07994 * 119.92846 * 180.24738 * 25 24 4 50 50 H 1.08998 * 109.47046 * 125.01972 * 27 26 25 51 51 H 0.96702 * 113.99551 * 60.00287 * 28 27 26 52 52 H 1.48503 * 109.99631 * 180.02562 * 29 27 26 53 53 H 1.48491 * 110.00087 * 301.31879 * 29 27 26 54 54 H 1.07995 * 120.00320 * 179.97438 * 30 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 0.0005 5 8 4.1795 0.1477 0.0016 6 6 5.6002 0.3007 0.0015 7 6 6.2518 -1.0582 0.0021 8 8 5.5669 -2.0591 0.0021 9 7 7.5957 -1.1612 0.0017 10 6 8.2290 -2.4822 0.0017 11 1 7.5832 -3.2613 -0.4033 12 6 9.6467 -2.4857 -0.5943 13 6 10.0347 -3.4605 0.5301 14 1 9.8839 -4.5083 0.2708 15 6 11.4164 -3.1877 1.1279 16 8 11.7347 -4.2078 2.0767 17 6 12.9364 -4.1134 2.7043 18 6 13.7940 -3.0637 2.4089 19 6 15.0124 -2.9665 3.0528 20 6 15.3826 -3.9212 3.9819 21 6 14.5320 -4.9714 4.2740 22 6 13.3100 -5.0697 3.6374 23 6 8.8779 -2.8542 1.3454 24 6 4.0602 2.5234 0.0058 25 6 3.3029 3.6798 -0.0004 26 6 1.9223 3.6057 -0.0013 27 6 1.1016 4.8696 -0.0024 28 8 0.3641 4.9597 1.2183 29 14 2.2309 6.3433 -0.1559 30 6 1.2931 2.3748 -0.0010 31 1 -0.3634 0.5139 -0.8899 32 1 -0.3634 -1.0277 0.0005 33 1 -0.3634 0.5138 0.8900 34 1 5.9065 0.8512 0.8910 35 1 5.9065 0.8497 -0.8890 36 1 8.1434 -0.3606 0.0013 37 1 9.7004 -2.9246 -1.5906 38 1 10.1501 -1.5211 -0.5290 39 1 12.1622 -3.1852 0.3330 40 1 11.4121 -2.2177 1.6252 41 1 13.5075 -2.3206 1.6793 42 1 15.6782 -2.1468 2.8269 43 1 16.3376 -3.8461 4.4807 44 1 14.8234 -5.7156 5.0005 45 1 12.6461 -5.8904 3.8655 46 1 9.1718 -1.9908 1.9422 47 1 8.3104 -3.5896 1.9156 48 1 5.1385 2.5840 0.0108 49 1 3.7907 4.6433 -0.0004 50 1 0.4097 4.8528 -0.8445 51 1 0.9172 4.9792 2.0113 52 1 1.4336 7.5961 -0.1575 53 1 3.1999 6.3600 0.9692 54 1 0.2146 2.3196 -0.0013 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16536076_60476.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:02:45 Heat of formation + Delta-G solvation = -86.458724 kcal Electronic energy + Delta-G solvation = -35578.281061 eV Core-core repulsion = 30642.313123 eV Total energy + Delta-G solvation = -4935.967938 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.181 amu Computer time = 2.07 seconds Orbital eigenvalues (eV) -41.85126 -41.40346 -40.89871 -39.85713 -39.11993 -38.87302 -38.06565 -37.02243 -34.80515 -32.11433 -31.98736 -31.48428 -31.08590 -29.93330 -28.70596 -28.37933 -26.73706 -26.22353 -24.55109 -23.62586 -23.28837 -22.69721 -22.34935 -21.68918 -20.66078 -19.80830 -19.19025 -18.62810 -18.33697 -17.95456 -17.65384 -17.51669 -17.13134 -16.93417 -16.88157 -16.68176 -16.49006 -16.14000 -16.06434 -15.86138 -15.80385 -15.41838 -15.40420 -15.24318 -14.74085 -14.38997 -14.33221 -14.26227 -14.08349 -13.78418 -13.56920 -13.48536 -13.46407 -13.25816 -12.98894 -12.66353 -12.59121 -12.55122 -12.37219 -12.18092 -12.14043 -12.04009 -11.99961 -11.83760 -11.64979 -11.62205 -11.29509 -10.96300 -10.61302 -10.13737 -9.96668 -9.79246 -9.17654 -8.92698 -4.88533 0.16327 0.27487 0.37896 0.48159 1.33229 1.43287 1.48979 1.63038 1.99568 2.18946 2.30507 2.54972 2.60336 2.83669 3.39003 3.40765 3.49180 3.55319 3.65830 3.74619 3.77569 3.85393 3.90122 3.90684 3.97103 4.04317 4.12217 4.14003 4.23504 4.26857 4.28285 4.29937 4.29957 4.35469 4.37753 4.49593 4.54777 4.56836 4.64246 4.65496 4.68549 4.71197 4.74705 4.81136 4.97264 5.00534 5.03185 5.07330 5.12123 5.19282 5.34250 5.36687 5.47311 5.51014 5.59422 5.60426 5.85699 5.96609 6.41817 6.47092 6.48988 6.54440 7.14706 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.336 6.336 3 C 0.076 3.924 4 C 0.085 3.915 5 O -0.315 6.315 6 C 0.034 3.966 7 C 0.511 3.489 8 O -0.576 6.576 9 N -0.697 5.697 10 C 0.118 3.882 11 H 0.092 0.908 12 C -0.114 4.114 13 C -0.106 4.106 14 H 0.095 0.905 15 C 0.069 3.931 16 O -0.334 6.334 17 C 0.112 3.888 18 C -0.216 4.216 19 C -0.088 4.088 20 C -0.169 4.169 21 C -0.088 4.088 22 C -0.177 4.177 23 C -0.146 4.146 24 C -0.159 4.159 25 C -0.111 4.111 26 C -0.115 4.115 27 C -0.086 4.086 28 O -0.551 6.551 29 Si 0.777 3.223 30 C -0.152 4.152 31 H 0.066 0.934 32 H 0.110 0.890 33 H 0.062 0.938 34 H 0.126 0.874 35 H 0.132 0.868 36 H 0.423 0.577 37 H 0.089 0.911 38 H 0.119 0.881 39 H 0.077 0.923 40 H 0.078 0.922 41 H 0.146 0.854 42 H 0.146 0.854 43 H 0.141 0.859 44 H 0.145 0.855 45 H 0.128 0.872 46 H 0.099 0.901 47 H 0.054 0.946 48 H 0.176 0.824 49 H 0.158 0.842 50 H 0.122 0.878 51 H 0.386 0.614 52 H -0.307 1.307 53 H -0.274 1.274 54 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.575 6.984 -2.800 10.677 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.250 6.250 3 C 0.031 3.969 4 C 0.040 3.960 5 O -0.229 6.229 6 C -0.043 4.043 7 C 0.298 3.702 8 O -0.454 6.454 9 N -0.351 5.351 10 C 0.013 3.987 11 H 0.110 0.890 12 C -0.152 4.152 13 C -0.125 4.125 14 H 0.113 0.887 15 C -0.006 4.006 16 O -0.248 6.248 17 C 0.067 3.933 18 C -0.235 4.235 19 C -0.106 4.106 20 C -0.187 4.187 21 C -0.106 4.106 22 C -0.195 4.195 23 C -0.184 4.184 24 C -0.177 4.177 25 C -0.129 4.129 26 C -0.116 4.116 27 C -0.194 4.194 28 O -0.359 6.359 29 Si 0.682 3.318 30 C -0.171 4.171 31 H 0.085 0.915 32 H 0.129 0.871 33 H 0.080 0.920 34 H 0.144 0.856 35 H 0.149 0.851 36 H 0.262 0.738 37 H 0.108 0.892 38 H 0.137 0.863 39 H 0.095 0.905 40 H 0.096 0.904 41 H 0.164 0.836 42 H 0.163 0.837 43 H 0.159 0.841 44 H 0.162 0.838 45 H 0.146 0.854 46 H 0.118 0.882 47 H 0.073 0.927 48 H 0.194 0.806 49 H 0.175 0.825 50 H 0.139 0.861 51 H 0.235 0.765 52 H -0.236 1.236 53 H -0.200 1.200 54 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 6.711 6.453 -2.843 9.734 hybrid contribution -0.646 -0.261 1.278 1.455 sum 6.065 6.191 -1.565 8.807 Atomic orbital electron populations 1.23282 0.76815 1.05200 1.02107 1.86189 1.23006 1.26696 1.89098 1.18684 0.89945 0.85597 1.02704 1.18603 0.88194 0.86557 1.02686 1.86225 1.18300 1.29097 1.89281 1.22800 0.79308 0.95135 1.07100 1.20655 0.83260 0.90841 0.75466 1.90774 1.64223 1.40311 1.50077 1.45632 1.05007 1.09997 1.74437 1.22433 0.93469 0.85335 0.97469 0.89012 1.23295 0.92761 1.00820 0.98279 1.22336 0.92049 1.00882 0.97254 0.88670 1.22985 0.96715 0.90204 0.90670 1.86061 1.33126 1.50847 1.54799 1.19249 0.85356 0.95286 0.93408 1.21518 0.96500 1.00175 1.05276 1.21333 0.95640 0.98847 0.94736 1.21429 1.01233 0.95731 1.00348 1.21281 0.92583 0.98332 0.98378 1.20709 0.98962 1.00436 0.99431 1.23609 0.96674 1.01242 0.96922 1.21379 1.02277 0.89267 1.04818 1.21046 0.92439 0.99109 1.00274 1.20116 0.94443 0.94683 1.02373 1.25322 1.02227 1.02264 0.89555 1.86573 1.37386 1.95591 1.16329 0.93974 0.77286 0.72368 0.88175 1.21021 1.00501 0.90551 1.04981 0.91504 0.87126 0.91988 0.85629 0.85097 0.73786 0.89221 0.86271 0.90455 0.90373 0.83634 0.83653 0.84138 0.83771 0.85396 0.88211 0.92731 0.80633 0.82483 0.86053 0.76467 1.23552 1.19989 0.84128 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.06 9.81 113.37 1.11 1.17 16 2 O -0.34 -3.82 10.28 -79.65 -0.82 -4.64 16 3 C 0.08 0.62 6.70 22.57 0.15 0.77 16 4 C 0.09 0.46 6.70 22.57 0.15 0.61 16 5 O -0.32 -2.69 9.45 -67.04 -0.63 -3.32 16 6 C 0.03 -0.10 5.22 71.24 0.37 0.27 16 7 C 0.51 1.72 7.91 87.66 0.69 2.42 16 8 O -0.58 -9.47 16.10 16.01 0.26 -9.22 16 9 N -0.70 3.47 5.35 -440.03 -2.36 1.11 16 10 C 0.12 -0.28 4.24 45.52 0.19 -0.09 16 11 H 0.09 0.36 7.46 -2.39 -0.02 0.34 16 12 C -0.11 0.96 7.39 31.12 0.23 1.19 16 13 C -0.11 0.42 4.02 -10.20 -0.04 0.38 16 14 H 0.09 -0.12 8.14 -2.39 -0.02 -0.14 16 15 C 0.07 -0.24 4.58 71.98 0.33 0.09 16 16 O -0.33 -1.46 10.14 -92.38 -0.94 -2.40 16 17 C 0.11 0.52 6.69 22.51 0.15 0.67 16 18 C -0.22 -0.19 9.04 22.37 0.20 0.02 16 19 C -0.09 0.01 10.04 22.25 0.22 0.23 16 20 C -0.17 -0.09 10.04 22.28 0.22 0.13 16 21 C -0.09 -0.17 10.04 22.25 0.22 0.06 16 22 C -0.18 -0.84 9.99 22.37 0.22 -0.62 16 23 C -0.15 0.28 7.44 31.18 0.23 0.51 16 24 C -0.16 0.46 9.04 22.35 0.20 0.66 16 25 C -0.11 0.39 8.66 22.27 0.19 0.58 16 26 C -0.12 0.02 5.35 -19.86 -0.11 -0.09 16 27 C -0.09 0.13 2.80 71.24 0.20 0.33 16 28 O -0.55 -1.13 12.83 -148.98 -1.91 -3.05 16 29 Si 0.78 -3.31 29.88 68.60 2.05 -1.26 16 30 C -0.15 -0.57 8.67 22.35 0.19 -0.37 16 31 H 0.07 -0.01 7.66 -2.39 -0.02 -0.02 16 32 H 0.11 0.02 8.14 -2.38 -0.02 0.00 16 33 H 0.06 0.05 7.67 -2.39 -0.02 0.03 16 34 H 0.13 -1.23 7.65 -2.39 -0.02 -1.25 16 35 H 0.13 -1.38 7.68 -2.38 -0.02 -1.40 16 36 H 0.42 -5.82 8.73 -92.71 -0.81 -6.63 16 37 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 38 H 0.12 -1.64 8.08 -2.39 -0.02 -1.66 16 39 H 0.08 -0.45 7.65 -2.39 -0.02 -0.47 16 40 H 0.08 -0.50 7.38 -2.38 -0.02 -0.52 16 41 H 0.15 -0.61 6.30 -2.91 -0.02 -0.63 16 42 H 0.15 -0.73 8.06 -2.92 -0.02 -0.75 16 43 H 0.14 -0.49 8.06 -2.91 -0.02 -0.52 16 44 H 0.14 -0.33 8.06 -2.91 -0.02 -0.35 16 45 H 0.13 0.49 8.06 -2.91 -0.02 0.47 16 46 H 0.10 -0.45 7.90 -2.39 -0.02 -0.47 16 47 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 48 H 0.18 -1.99 6.30 -2.91 -0.02 -2.01 16 49 H 0.16 -1.39 4.83 -2.91 -0.01 -1.41 16 50 H 0.12 -0.32 7.96 -2.39 -0.02 -0.34 16 51 H 0.39 -1.38 8.70 -74.06 -0.64 -2.02 16 52 H -0.31 -1.28 7.11 99.48 0.71 -0.57 16 53 H -0.27 0.51 7.00 99.48 0.70 1.21 16 54 H 0.14 0.32 6.30 -2.91 -0.02 0.30 16 Total: 0.00 -33.83 445.54 0.53 -33.30 By element: Atomic # 1 Polarization: -18.97 SS G_CDS: -0.47 Total: -19.44 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: 5.35 Total: 8.92 kcal Atomic # 7 Polarization: 3.47 SS G_CDS: -2.36 Total: 1.11 kcal Atomic # 8 Polarization: -18.58 SS G_CDS: -4.04 Total: -22.62 kcal Atomic # 14 Polarization: -3.31 SS G_CDS: 2.05 Total: -1.26 kcal Total: -33.83 0.53 -33.30 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_60476.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.161 kcal (2) G-P(sol) polarization free energy of solvation -33.826 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.987 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.528 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.298 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.459 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.07 seconds