Wall clock time and date at job start Sun Mar 7 2021 05:03:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35959 * 117.00020 * 2 1 4 4 C 1.39453 * 120.12120 * 179.97438 * 3 2 1 5 5 O 1.34768 * 133.24344 * 0.02562 * 4 3 2 6 6 C 1.34922 * 110.84502 * 180.02562 * 5 4 3 7 7 C 1.46994 * 125.14225 * 180.02562 * 6 5 4 8 8 O 1.21649 * 120.00326 * 179.97438 * 7 6 5 9 9 N 1.34778 * 119.99702 * 359.97204 * 7 6 5 10 10 C 1.46507 * 119.99870 * 180.02562 * 9 7 6 11 11 H 1.08996 * 112.84755 * 25.33429 * 10 9 7 12 12 C 1.53781 * 113.61520 * 156.53070 * 10 9 7 13 13 C 1.53787 * 87.08066 * 139.98038 * 12 10 9 14 14 H 1.08996 * 113.61008 * 89.11910 * 13 12 10 15 15 C 1.52995 * 113.61147 * 219.93690 * 13 12 10 16 16 O 1.42902 * 109.47176 * 185.00300 * 15 13 12 17 17 C 1.35893 * 117.00529 * 180.02562 * 16 15 13 18 18 C 1.38742 * 120.05264 * 359.72028 * 17 16 15 19 19 C 1.38142 * 119.94103 * 179.70428 * 18 17 16 20 20 C 1.38268 * 120.05777 * 0.59297 * 19 18 17 21 21 C 1.38271 * 120.10987 * 359.68521 * 20 19 18 22 22 C 1.38148 * 120.05580 * 0.02562 * 21 20 19 23 23 C 1.53783 * 113.61223 * 254.13798 * 10 9 7 24 24 C 1.35805 * 109.72021 * 0.02562 * 6 5 4 25 25 C 1.40609 * 119.13474 * 180.02562 * 4 3 2 26 26 C 1.39770 * 120.12145 * 359.72826 * 25 4 3 27 27 C 1.50706 * 120.09530 * 180.29404 * 26 25 4 28 28 O 1.42897 * 109.47206 * 285.23014 * 27 26 25 29 29 Si 1.86297 * 109.47268 * 165.22958 * 27 26 25 30 30 C 1.36627 * 119.81585 * 0.52789 * 26 25 4 31 31 C 1.38262 * 120.12300 * 359.97438 * 3 2 1 32 32 H 1.09000 * 109.47258 * 180.02562 * 1 2 3 33 33 H 1.08995 * 109.47175 * 300.00324 * 1 2 3 34 34 H 1.09002 * 109.47015 * 59.99769 * 1 2 3 35 35 H 0.96997 * 120.00131 * 0.02562 * 9 7 6 36 36 H 1.08992 * 113.61204 * 254.53165 * 12 10 9 37 37 H 1.09005 * 113.61059 * 25.43315 * 12 10 9 38 38 H 1.09001 * 109.47172 * 304.99902 * 15 13 12 39 39 H 1.08993 * 109.47533 * 64.99960 * 15 13 12 40 40 H 1.07994 * 120.02776 * 359.97438 * 18 17 16 41 41 H 1.07999 * 119.97584 * 180.32318 * 19 18 17 42 42 H 1.08001 * 119.94937 * 179.69774 * 20 19 18 43 43 H 1.08001 * 119.97073 * 180.02562 * 21 20 19 44 44 H 1.07996 * 120.02490 * 180.02562 * 22 21 20 45 45 H 1.08998 * 113.61644 * 334.56406 * 23 10 9 46 46 H 1.08997 * 113.61438 * 105.47189 * 23 10 9 47 47 H 1.07999 * 126.95828 * 179.97438 * 24 6 5 48 48 H 1.08998 * 109.46756 * 45.22892 * 27 26 25 49 49 H 0.96690 * 114.00410 * 299.99931 * 28 27 26 50 50 H 1.48494 * 110.00149 * 180.02562 * 29 27 26 51 51 H 1.48501 * 110.00065 * 301.32014 * 29 27 26 52 52 H 1.08002 * 119.75872 * 179.77657 * 30 26 25 53 53 H 1.07993 * 119.65997 * 359.97438 * 31 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4388 1.2873 0.0005 5 8 4.4141 0.3573 0.0007 6 6 5.6317 0.9386 0.0018 7 6 6.9131 0.2184 0.0018 8 8 7.9596 0.8387 0.0024 9 7 6.9286 -1.1293 0.0010 10 6 8.2058 -1.8472 0.0015 11 1 9.0192 -1.2634 0.4322 12 6 8.1091 -3.2760 0.5618 13 6 9.0733 -3.6968 -0.5599 14 1 10.1248 -3.6192 -0.2837 15 6 8.7237 -5.0441 -1.1951 16 8 9.7351 -5.4025 -2.1389 17 6 9.5751 -6.5804 -2.7973 18 6 8.4703 -7.3780 -2.5361 19 6 8.3068 -8.5720 -3.2111 20 6 9.2493 -8.9785 -4.1376 21 6 10.3542 -8.1882 -4.3955 22 6 10.5192 -6.9904 -3.7274 23 6 8.5550 -2.4840 -1.3540 24 6 5.4945 2.2897 0.0031 25 6 4.0555 2.5510 0.0011 26 6 3.2766 3.7115 -0.0047 27 6 3.9382 5.0656 -0.0108 28 8 4.4648 5.3443 1.2880 29 14 2.6851 6.3671 -0.4652 30 6 1.9138 3.6151 0.0001 31 6 1.2958 2.3726 -0.0005 32 1 -0.3634 -1.0277 0.0005 33 1 -0.3633 0.5139 0.8899 34 1 -0.3633 0.5139 -0.8900 35 1 6.0943 -1.6239 0.0002 36 1 8.5296 -3.3822 1.5618 37 1 7.1153 -3.7144 0.4707 38 1 8.6642 -5.8072 -0.4191 39 1 7.7628 -4.9675 -1.7038 40 1 7.7365 -7.0634 -1.8088 41 1 7.4443 -9.1908 -3.0120 42 1 9.1222 -9.9148 -4.6608 43 1 11.0887 -8.5077 -5.1199 44 1 11.3822 -6.3733 -3.9296 45 1 7.6834 -2.7055 -1.9699 46 1 9.3350 -1.9518 -1.8984 47 1 6.2875 3.0229 0.0046 48 1 4.7483 5.0708 -0.7401 49 1 3.7985 5.3556 1.9886 50 1 3.3252 7.7069 -0.4753 51 1 2.1066 6.0710 -1.8004 52 1 1.3129 4.5125 -0.0007 53 1 0.2175 2.3120 -0.0014 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16536076_6672420.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:03:03 Heat of formation + Delta-G solvation = -45.885970 kcal Electronic energy + Delta-G solvation = -37261.712088 eV Core-core repulsion = 32226.588854 eV Total energy + Delta-G solvation = -5035.123234 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.165 amu Computer time = 1.71 seconds Orbital eigenvalues (eV) -43.80383 -41.53646 -41.00071 -40.57312 -39.55575 -39.08717 -38.12635 -37.01936 -34.96619 -33.69734 -32.06910 -31.93763 -31.25349 -30.89437 -29.22846 -28.46957 -26.81918 -26.37464 -25.66972 -24.02811 -24.01652 -23.33453 -22.54712 -21.94359 -21.81623 -20.88358 -19.74293 -19.19315 -19.01929 -18.54068 -17.94270 -17.85086 -17.62586 -17.02838 -16.99986 -16.90903 -16.62867 -16.60079 -16.28340 -16.13746 -15.82510 -15.78042 -15.66883 -15.30597 -14.77906 -14.57274 -14.51019 -14.41023 -14.31506 -14.19340 -14.11862 -13.59090 -13.54996 -13.44047 -13.36099 -13.27987 -13.05410 -12.63105 -12.46320 -12.41563 -12.30364 -12.10986 -12.09995 -11.92684 -11.88755 -11.73214 -11.60003 -11.31358 -11.05914 -10.46015 -10.35305 -9.98745 -9.86119 -9.19921 -9.03056 -5.01378 -0.72247 0.07657 0.35810 0.46075 0.56126 1.12257 1.29081 1.67181 1.80661 1.83013 1.99570 2.11671 2.19409 2.37555 2.81605 3.13138 3.32210 3.39846 3.44126 3.60807 3.66403 3.67238 3.71890 3.77926 3.84721 3.87291 3.93528 3.95580 4.14429 4.20466 4.22484 4.26687 4.32345 4.33255 4.39118 4.43001 4.43495 4.47290 4.51673 4.62277 4.64356 4.69488 4.74887 4.77023 4.79188 4.84205 4.87674 4.96608 5.02180 5.04593 5.06318 5.19209 5.29112 5.32208 5.40824 5.45411 5.55344 5.58316 5.83433 6.14842 6.26258 6.43730 6.75345 6.77661 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.333 6.333 3 C 0.137 3.863 4 C 0.020 3.980 5 O -0.180 6.180 6 C -0.034 4.034 7 C 0.602 3.398 8 O -0.547 6.547 9 N -0.692 5.692 10 C 0.114 3.886 11 H 0.108 0.892 12 C -0.117 4.117 13 C -0.101 4.101 14 H 0.104 0.896 15 C 0.068 3.932 16 O -0.331 6.331 17 C 0.111 3.889 18 C -0.218 4.218 19 C -0.088 4.088 20 C -0.169 4.169 21 C -0.087 4.087 22 C -0.175 4.175 23 C -0.146 4.146 24 C -0.116 4.116 25 C -0.100 4.100 26 C -0.109 4.109 27 C -0.081 4.081 28 O -0.555 6.555 29 Si 0.797 3.203 30 C -0.078 4.078 31 C -0.165 4.165 32 H 0.115 0.885 33 H 0.078 0.922 34 H 0.074 0.926 35 H 0.418 0.582 36 H 0.096 0.904 37 H 0.110 0.890 38 H 0.078 0.922 39 H 0.073 0.927 40 H 0.143 0.857 41 H 0.145 0.855 42 H 0.142 0.858 43 H 0.146 0.854 44 H 0.130 0.870 45 H 0.092 0.908 46 H 0.065 0.935 47 H 0.168 0.832 48 H 0.096 0.904 49 H 0.396 0.604 50 H -0.301 1.301 51 H -0.280 1.280 52 H 0.176 0.824 53 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.640 -2.717 2.389 11.238 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.247 6.247 3 C 0.091 3.909 4 C -0.028 4.028 5 O -0.082 6.082 6 C -0.084 4.084 7 C 0.388 3.612 8 O -0.426 6.426 9 N -0.342 5.342 10 C 0.010 3.990 11 H 0.126 0.874 12 C -0.155 4.155 13 C -0.120 4.120 14 H 0.123 0.877 15 C -0.006 4.006 16 O -0.246 6.246 17 C 0.066 3.934 18 C -0.237 4.237 19 C -0.106 4.106 20 C -0.187 4.187 21 C -0.105 4.105 22 C -0.193 4.193 23 C -0.185 4.185 24 C -0.137 4.137 25 C -0.101 4.101 26 C -0.109 4.109 27 C -0.190 4.190 28 O -0.363 6.363 29 Si 0.701 3.299 30 C -0.095 4.095 31 C -0.183 4.183 32 H 0.133 0.867 33 H 0.096 0.904 34 H 0.093 0.907 35 H 0.256 0.744 36 H 0.115 0.885 37 H 0.128 0.872 38 H 0.096 0.904 39 H 0.091 0.909 40 H 0.160 0.840 41 H 0.162 0.838 42 H 0.159 0.841 43 H 0.164 0.836 44 H 0.148 0.852 45 H 0.110 0.890 46 H 0.083 0.917 47 H 0.186 0.814 48 H 0.114 0.886 49 H 0.246 0.754 50 H -0.229 1.229 51 H -0.206 1.206 52 H 0.193 0.807 53 H 0.202 0.798 Dipole moment (debyes) X Y Z Total from point charges -9.378 -2.027 1.505 9.712 hybrid contribution 0.404 -0.464 -0.322 0.695 sum -8.974 -2.491 1.183 9.389 Atomic orbital electron populations 1.23501 0.75226 1.06046 1.03264 1.86143 1.24387 1.25777 1.88437 1.17993 0.85981 0.86983 0.99978 1.19231 0.88324 0.87003 1.08198 1.83998 1.12627 1.35023 1.76527 1.21930 0.84103 0.92687 1.09667 1.16726 0.84949 0.82995 0.76513 1.90891 1.31486 1.68339 1.51904 1.45853 1.11035 1.04734 1.72537 1.22700 0.85815 0.92383 0.98079 0.87367 1.23311 1.01009 0.92196 0.99015 1.22322 1.01291 0.91703 0.96672 0.87732 1.22957 0.90239 0.96728 0.90703 1.86050 1.49099 1.35455 1.53977 1.19259 0.95074 0.85817 0.93218 1.21510 0.99323 0.97562 1.05266 1.21323 0.99264 0.95357 0.94672 1.21434 0.95327 1.01514 1.00385 1.21298 0.98047 0.92900 0.98254 1.20711 1.00409 0.99083 0.99129 1.23603 1.01648 0.96500 0.96713 1.22851 0.95526 0.94484 1.00821 1.19600 0.92249 0.93045 1.05192 1.19689 0.93824 0.93892 1.03534 1.25377 1.05837 0.98655 0.89094 1.86502 1.39697 1.93276 1.16839 0.93851 0.80252 0.73098 0.82677 1.20802 0.92377 0.98676 0.97692 1.21441 1.02006 0.89502 1.05348 0.86680 0.90362 0.90711 0.74410 0.88522 0.87169 0.90375 0.90911 0.83960 0.83764 0.84050 0.83597 0.85199 0.88986 0.91652 0.81437 0.88621 0.75424 1.22894 1.20641 0.80682 0.79848 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.11 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.57 10.50 -93.09 -0.98 -1.55 16 3 C 0.14 0.34 6.70 22.57 0.15 0.49 16 4 C 0.02 0.15 7.35 23.14 0.17 0.32 16 5 O -0.18 -1.52 10.28 -13.28 -0.14 -1.66 16 6 C -0.03 -0.31 7.07 24.00 0.17 -0.14 16 7 C 0.60 5.51 7.80 86.54 0.67 6.18 16 8 O -0.55 -8.56 16.44 -4.19 -0.07 -8.63 16 9 N -0.69 -1.53 5.36 -443.70 -2.38 -3.90 16 10 C 0.11 0.04 4.21 45.52 0.19 0.23 16 11 H 0.11 0.39 7.50 -2.39 -0.02 0.38 16 12 C -0.12 0.63 7.39 31.12 0.23 0.86 16 13 C -0.10 0.23 4.01 -10.21 -0.04 0.19 16 14 H 0.10 -0.12 8.14 -2.39 -0.02 -0.14 16 15 C 0.07 -0.09 4.58 71.98 0.33 0.24 16 16 O -0.33 -1.86 10.14 -92.34 -0.94 -2.80 16 17 C 0.11 0.66 6.69 22.51 0.15 0.81 16 18 C -0.22 -0.57 9.04 22.37 0.20 -0.37 16 19 C -0.09 -0.12 10.04 22.25 0.22 0.11 16 20 C -0.17 -0.26 10.04 22.28 0.22 -0.03 16 21 C -0.09 -0.23 10.04 22.26 0.22 0.00 16 22 C -0.17 -0.96 9.99 22.37 0.22 -0.74 16 23 C -0.15 -0.05 7.45 31.18 0.23 0.18 16 24 C -0.12 -1.09 10.68 23.79 0.25 -0.84 16 25 C -0.10 -0.69 6.16 -20.24 -0.12 -0.82 16 26 C -0.11 -0.15 5.26 -19.87 -0.10 -0.25 16 27 C -0.08 -0.05 2.70 71.24 0.19 0.14 16 28 O -0.55 -0.95 12.88 -148.98 -1.92 -2.86 16 29 Si 0.80 -2.97 29.93 68.60 2.05 -0.92 16 30 C -0.08 0.35 8.62 22.02 0.19 0.54 16 31 C -0.16 0.70 9.03 22.40 0.20 0.91 16 32 H 0.11 -1.17 8.14 -2.39 -0.02 -1.19 16 33 H 0.08 -0.88 7.66 -2.39 -0.02 -0.90 16 34 H 0.07 -0.80 7.66 -2.39 -0.02 -0.82 16 35 H 0.42 -0.79 8.43 -92.71 -0.78 -1.57 16 36 H 0.10 -0.65 8.14 -2.39 -0.02 -0.67 16 37 H 0.11 -0.96 8.07 -2.38 -0.02 -0.98 16 38 H 0.08 -0.30 7.65 -2.39 -0.02 -0.31 16 39 H 0.07 -0.23 7.39 -2.39 -0.02 -0.25 16 40 H 0.14 -0.25 6.30 -2.91 -0.02 -0.27 16 41 H 0.14 -0.49 8.06 -2.91 -0.02 -0.51 16 42 H 0.14 -0.38 8.06 -2.91 -0.02 -0.40 16 43 H 0.15 -0.27 8.06 -2.91 -0.02 -0.29 16 44 H 0.13 0.55 8.06 -2.91 -0.02 0.53 16 45 H 0.09 -0.04 7.91 -2.39 -0.02 -0.06 16 46 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 47 H 0.17 1.57 8.06 -2.91 -0.02 1.55 16 48 H 0.10 0.35 7.96 -2.39 -0.02 0.33 16 49 H 0.40 -2.92 8.70 -74.06 -0.64 -3.56 16 50 H -0.30 -1.34 7.11 99.48 0.71 -0.63 16 51 H -0.28 -0.15 7.11 99.48 0.71 0.56 16 52 H 0.18 -2.12 5.07 -2.91 -0.01 -2.14 16 53 H 0.18 -2.17 6.26 -2.91 -0.02 -2.19 16 Total: 0.00 -26.95 443.81 0.31 -26.64 By element: Atomic # 1 Polarization: -12.92 SS G_CDS: -0.41 Total: -13.33 kcal Atomic # 6 Polarization: 3.93 SS G_CDS: 5.08 Total: 9.01 kcal Atomic # 7 Polarization: -1.53 SS G_CDS: -2.38 Total: -3.90 kcal Atomic # 8 Polarization: -13.46 SS G_CDS: -4.04 Total: -17.50 kcal Atomic # 14 Polarization: -2.97 SS G_CDS: 2.05 Total: -0.92 kcal Total: -26.95 0.31 -26.64 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_6672420.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.248 kcal (2) G-P(sol) polarization free energy of solvation -26.947 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.195 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.309 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.638 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.886 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.71 seconds