Wall clock time and date at job start Sun Mar 7 2021 09:02:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86303 * 109.46829 * 2 1 4 4 C 1.50694 * 109.47064 * 119.99883 * 2 1 3 5 5 C 1.35452 * 126.06938 * 245.04315 * 4 2 1 6 6 N 1.35541 * 108.87220 * 179.73170 * 5 4 2 7 7 C 1.37650 * 108.63996 * 0.37882 * 6 5 4 8 8 C 1.46686 * 126.22921 * 179.89092 * 7 6 5 9 9 O 1.21691 * 119.99768 * 179.69069 * 8 7 6 10 10 N 1.34773 * 119.99873 * 359.40783 * 8 7 6 11 11 C 1.46496 * 119.99974 * 179.97438 * 10 8 7 12 12 H 1.09004 * 109.47192 * 35.00579 * 11 10 8 13 13 C 1.52998 * 109.47205 * 155.00267 * 11 10 8 14 14 C 1.53006 * 109.47352 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.46888 * 300.00062 * 14 13 11 16 16 H 1.09001 * 109.47500 * 299.99671 * 15 14 13 17 17 N 1.46906 * 109.47049 * 179.97438 * 15 14 13 18 18 H 1.00899 * 109.47464 * 300.00125 * 17 15 14 19 19 C 1.46932 * 109.47812 * 179.97438 * 17 15 14 20 20 C 1.53076 * 109.37881 * 180.02562 * 19 17 15 21 21 O 1.43033 * 109.25158 * 57.62380 * 20 19 17 22 22 C 1.43030 * 113.65882 * 302.10236 * 21 20 19 23 23 C 1.46941 * 109.47553 * 60.01836 * 17 15 14 24 24 C 1.52998 * 109.47175 * 59.99829 * 15 14 13 25 25 C 1.52996 * 109.47356 * 299.99891 * 24 15 14 26 26 C 1.37872 * 107.53665 * 359.62425 * 7 6 5 27 27 H 0.96699 * 113.99803 * 300.00475 * 1 2 3 28 28 H 1.08991 * 109.47037 * 239.99988 * 2 1 3 29 29 H 1.48492 * 110.00264 * 299.99911 * 3 2 1 30 30 H 1.48499 * 110.00118 * 61.32248 * 3 2 1 31 31 H 1.08005 * 125.56574 * 359.96652 * 5 4 2 32 32 H 0.96992 * 125.67548 * 180.23046 * 6 5 4 33 33 H 0.97004 * 120.00023 * 0.02562 * 10 8 7 34 34 H 1.08998 * 109.47303 * 300.00077 * 13 11 10 35 35 H 1.09001 * 109.47035 * 60.00520 * 13 11 10 36 36 H 1.09001 * 109.46781 * 60.00174 * 14 13 11 37 37 H 1.09001 * 109.47305 * 180.02562 * 14 13 11 38 38 H 1.09009 * 109.48884 * 299.96247 * 19 17 15 39 39 H 1.08999 * 109.49175 * 60.01890 * 19 17 15 40 40 H 1.08999 * 109.49688 * 297.70147 * 20 19 17 41 41 H 1.08996 * 109.51103 * 177.56444 * 20 19 17 42 42 H 1.08994 * 109.50854 * 297.97814 * 22 21 20 43 43 H 1.09001 * 109.51187 * 177.83534 * 22 21 20 44 44 H 1.08998 * 109.48442 * 299.98150 * 23 17 15 45 45 H 1.08998 * 109.48599 * 60.01739 * 23 17 15 46 46 H 1.09004 * 109.46790 * 60.00011 * 24 15 14 47 47 H 1.09001 * 109.47061 * 179.97438 * 24 15 14 48 48 H 1.08999 * 109.47373 * 300.00282 * 25 24 15 49 49 H 1.09001 * 109.47309 * 179.97438 * 25 24 15 50 50 H 1.08004 * 126.45455 * 180.22451 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6328 -0.1496 2.2445 6 7 2.8998 -1.1015 3.1717 7 6 2.3680 -2.2961 2.7417 8 6 2.4352 -3.5795 3.4487 9 8 1.9180 -4.5689 2.9643 10 7 3.0746 -3.6643 4.6321 11 6 3.1413 -4.9459 5.3385 12 1 3.2211 -5.7564 4.6140 13 6 4.3657 -4.9596 6.2558 14 6 4.4357 -6.2984 6.9932 15 6 3.1690 -6.4863 7.8305 16 1 3.0890 -5.6761 8.5553 17 7 3.2359 -7.7720 8.5380 18 1 3.3097 -8.5218 7.8669 19 6 2.0198 -7.9524 9.3426 20 6 2.0922 -9.2923 10.0792 21 8 3.2690 -9.3208 10.8917 22 6 4.4796 -9.1255 10.1554 23 6 4.4116 -7.7857 9.4193 24 6 1.9446 -6.4726 6.9132 25 6 1.8746 -5.1339 6.1759 26 6 1.7554 -2.0652 1.5283 27 1 -0.3933 0.4418 0.7650 28 1 1.7924 -0.5138 -0.8899 29 1 1.5615 2.4679 -1.2084 30 1 1.5879 2.4586 1.2243 31 1 2.9275 0.8876 2.3062 32 1 3.3866 -0.9643 3.9993 33 1 3.4900 -2.8764 5.0164 34 1 5.2681 -4.8262 5.6593 35 1 4.2859 -4.1492 6.9804 36 1 4.5157 -7.1086 6.2684 37 1 5.3077 -6.3080 7.6471 38 1 1.9405 -7.1428 10.0684 39 1 1.1470 -7.9425 8.6898 40 1 2.1311 -10.1047 9.3536 41 1 1.2112 -9.4088 10.7104 42 1 4.6001 -9.9322 9.4324 43 1 5.3264 -9.1213 10.8417 44 1 5.3143 -7.6520 8.8232 45 1 4.3317 -6.9760 10.1447 46 1 2.0246 -7.2829 6.1884 47 1 1.0422 -6.6069 7.5097 48 1 1.7947 -4.3237 6.9006 49 1 1.0025 -5.1243 5.5220 50 1 1.2373 -2.7937 0.9221 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608376_10543058.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:35 Heat of formation + Delta-G solvation = 37.973520 kcal Electronic energy + Delta-G solvation = -29751.133446 eV Core-core repulsion = 25670.785061 eV Total energy + Delta-G solvation = -4080.348385 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.196 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -43.39566 -42.51153 -40.71997 -39.31984 -37.86153 -37.64898 -35.00252 -33.28854 -32.66271 -31.79459 -31.28267 -30.26407 -28.19418 -26.52133 -26.10040 -24.60071 -23.64654 -23.52338 -22.92548 -21.56009 -21.19485 -20.77679 -19.99351 -18.90024 -18.26065 -17.80458 -17.76331 -17.39885 -17.00934 -16.96279 -16.59426 -16.47489 -16.14162 -16.01095 -15.76481 -15.36856 -15.30574 -14.92699 -14.57367 -14.56715 -14.29951 -14.18390 -13.92661 -13.91633 -13.89508 -13.50710 -13.30758 -12.96900 -12.93264 -12.77513 -12.59780 -12.51109 -12.32280 -11.89530 -11.86252 -11.73399 -11.51432 -11.34765 -11.01184 -10.53546 -10.31336 -10.00136 -9.33289 -4.89019 0.31417 0.62964 1.34888 1.50387 1.61667 1.87783 2.06842 2.10678 2.21437 2.47055 2.54900 2.65200 2.94130 3.13069 3.34956 3.38468 3.51539 3.60425 3.65046 3.73635 3.79131 3.87118 3.88607 3.95307 4.03699 4.09415 4.10824 4.14301 4.19951 4.28608 4.32116 4.32782 4.47793 4.52520 4.56780 4.65111 4.65690 4.68552 4.75423 4.79580 4.85101 4.88658 4.97141 4.98411 5.00512 5.13409 5.18710 5.37269 5.54725 5.68937 5.90063 6.29279 6.48491 6.58696 7.01548 Molecular weight = 337.20amu Principal moments of inertia in cm(-1) A = 0.037851 B = 0.001936 C = 0.001894 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 739.559179 B =14457.354342 C =14783.530296 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.059 4.059 3 Si 0.782 3.218 4 C -0.225 4.225 5 C 0.058 3.942 6 N -0.512 5.512 7 C -0.069 4.069 8 C 0.593 3.407 9 O -0.572 6.572 10 N -0.714 5.714 11 C 0.133 3.867 12 H 0.071 0.929 13 C -0.119 4.119 14 C -0.136 4.136 15 C 0.046 3.954 16 H 0.159 0.841 17 N -0.370 5.370 18 H 0.433 0.567 19 C -0.035 4.035 20 C 0.029 3.971 21 O -0.401 6.401 22 C 0.027 3.973 23 C -0.035 4.035 24 C -0.136 4.136 25 C -0.128 4.128 26 C -0.109 4.109 27 H 0.384 0.616 28 H 0.107 0.893 29 H -0.320 1.320 30 H -0.266 1.266 31 H 0.209 0.791 32 H 0.438 0.562 33 H 0.412 0.588 34 H 0.080 0.920 35 H 0.098 0.902 36 H 0.094 0.906 37 H 0.121 0.879 38 H 0.145 0.855 39 H 0.157 0.843 40 H 0.086 0.914 41 H 0.125 0.875 42 H 0.086 0.914 43 H 0.127 0.873 44 H 0.166 0.834 45 H 0.145 0.855 46 H 0.090 0.910 47 H 0.107 0.893 48 H 0.088 0.912 49 H 0.045 0.955 50 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.940 -11.897 22.383 27.228 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.168 4.168 3 Si 0.687 3.313 4 C -0.231 4.231 5 C -0.080 4.080 6 N -0.110 5.110 7 C -0.182 4.182 8 C 0.381 3.619 9 O -0.451 6.451 10 N -0.365 5.365 11 C 0.030 3.970 12 H 0.089 0.911 13 C -0.158 4.158 14 C -0.174 4.174 15 C -0.056 4.056 16 H 0.177 0.823 17 N 0.051 4.949 18 H 0.271 0.729 19 C -0.157 4.157 20 C -0.048 4.048 21 O -0.320 6.320 22 C -0.050 4.050 23 C -0.156 4.156 24 C -0.174 4.174 25 C -0.167 4.167 26 C -0.136 4.136 27 H 0.233 0.767 28 H 0.125 0.875 29 H -0.249 1.249 30 H -0.191 1.191 31 H 0.226 0.774 32 H 0.280 0.720 33 H 0.248 0.752 34 H 0.099 0.901 35 H 0.116 0.884 36 H 0.113 0.887 37 H 0.139 0.861 38 H 0.163 0.837 39 H 0.175 0.825 40 H 0.104 0.896 41 H 0.142 0.858 42 H 0.104 0.896 43 H 0.145 0.855 44 H 0.183 0.817 45 H 0.163 0.837 46 H 0.109 0.891 47 H 0.126 0.874 48 H 0.106 0.894 49 H 0.063 0.937 50 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 9.538 -11.984 22.101 26.890 hybrid contribution -1.269 0.002 -0.294 1.303 sum 8.269 -11.982 21.807 26.221 Atomic orbital electron populations 1.86589 1.19496 1.80429 1.50087 1.24669 0.82555 1.11830 0.97715 0.94374 0.89429 0.70849 0.76660 1.19841 1.08814 0.94621 0.99819 1.22319 1.00596 0.95941 0.89153 1.41790 1.43178 1.06311 1.19720 1.20230 1.11501 0.87171 0.99302 1.17089 0.77897 0.85952 0.80980 1.90859 1.48496 1.37606 1.68174 1.45770 1.56400 1.13921 1.20397 1.21310 0.96524 0.85172 0.94036 0.91076 1.21721 0.96379 0.99125 0.98545 1.22085 0.96338 0.98957 1.00018 1.23410 0.98960 0.85416 0.97820 0.82346 1.45419 1.15154 1.17591 1.16696 0.72877 1.24554 0.88386 1.03519 0.99275 1.23289 0.90173 0.94853 0.96447 1.88323 1.15021 1.93107 1.35501 1.23322 0.88881 0.94739 0.98011 1.24592 0.90034 1.03639 0.97344 1.22022 0.97555 0.98795 0.99045 1.21820 0.97279 0.98550 0.99046 1.21233 1.00613 0.96336 0.95446 0.76672 0.87542 1.24940 1.19150 0.77410 0.71978 0.75168 0.90103 0.88378 0.88696 0.86061 0.83719 0.82498 0.89600 0.85753 0.89576 0.85502 0.81681 0.83662 0.89134 0.87437 0.89390 0.93650 0.86043 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 4.41 12.88 -148.98 -1.92 2.49 16 2 C -0.06 0.76 3.02 71.23 0.22 0.97 16 3 Si 0.78 -12.80 30.60 68.60 2.10 -10.70 16 4 C -0.22 3.39 5.43 -20.12 -0.11 3.28 16 5 C 0.06 -1.32 10.45 83.48 0.87 -0.45 16 6 N -0.51 13.21 5.99 -183.61 -1.10 12.11 16 7 C -0.07 1.22 7.06 40.35 0.28 1.50 16 8 C 0.59 -11.05 7.75 86.45 0.67 -10.38 16 9 O -0.57 5.15 16.54 -4.32 -0.07 5.08 16 10 N -0.71 22.10 5.07 -446.50 -2.27 19.83 16 11 C 0.13 -4.94 2.46 44.99 0.11 -4.83 16 12 H 0.07 -2.21 7.57 -2.38 -0.02 -2.23 16 13 C -0.12 5.54 5.39 30.60 0.16 5.71 16 14 C -0.14 7.51 4.90 30.60 0.15 7.66 16 15 C 0.05 -2.69 1.62 44.91 0.07 -2.62 16 16 H 0.16 -9.76 8.14 -2.39 -0.02 -9.78 16 17 N -0.37 23.03 0.24 -870.57 -0.21 22.82 16 18 H 0.43 -28.40 8.32 -89.69 -0.75 -29.14 16 19 C -0.04 2.07 4.93 86.32 0.43 2.50 16 20 C 0.03 -1.45 6.97 72.01 0.50 -0.94 16 21 O -0.40 16.98 10.84 -148.98 -1.62 15.36 16 22 C 0.03 -1.37 6.96 71.99 0.50 -0.87 16 23 C -0.03 2.08 4.93 86.30 0.43 2.50 16 24 C -0.14 6.94 4.90 30.59 0.15 7.09 16 25 C -0.13 5.08 5.50 30.59 0.17 5.25 16 26 C -0.11 1.21 10.59 22.57 0.24 1.45 16 27 H 0.38 -5.59 8.70 -74.06 -0.64 -6.24 16 28 H 0.11 -1.26 7.96 -2.39 -0.02 -1.28 16 29 H -0.32 1.73 7.11 99.48 0.71 2.44 16 30 H -0.27 4.10 7.11 99.48 0.71 4.81 16 31 H 0.21 -6.06 6.21 -2.91 -0.02 -6.08 16 32 H 0.44 -15.25 8.19 -92.71 -0.76 -16.01 16 33 H 0.41 -15.35 7.73 -92.71 -0.72 -16.07 16 34 H 0.08 -3.45 8.14 -2.39 -0.02 -3.47 16 35 H 0.10 -4.81 8.14 -2.39 -0.02 -4.83 16 36 H 0.09 -5.17 8.14 -2.39 -0.02 -5.19 16 37 H 0.12 -7.19 6.29 -2.39 -0.02 -7.21 16 38 H 0.14 -8.51 8.14 -2.38 -0.02 -8.53 16 39 H 0.16 -9.53 6.15 -2.39 -0.01 -9.55 16 40 H 0.09 -4.40 8.14 -2.39 -0.02 -4.42 16 41 H 0.12 -5.79 8.14 -2.39 -0.02 -5.81 16 42 H 0.09 -4.50 8.14 -2.39 -0.02 -4.52 16 43 H 0.13 -6.10 8.14 -2.39 -0.02 -6.12 16 44 H 0.17 -10.59 6.15 -2.39 -0.01 -10.60 16 45 H 0.15 -8.77 8.14 -2.39 -0.02 -8.79 16 46 H 0.09 -4.52 8.14 -2.38 -0.02 -4.54 16 47 H 0.11 -5.73 6.28 -2.39 -0.01 -5.74 16 48 H 0.09 -3.69 8.14 -2.39 -0.02 -3.71 16 49 H 0.04 -1.32 8.14 -2.39 -0.02 -1.34 16 50 H 0.12 -0.76 8.06 -2.91 -0.02 -0.78 16 Total: 1.00 -87.84 382.68 -2.08 -89.92 By element: Atomic # 1 Polarization: -172.90 SS G_CDS: -1.84 Total: -174.74 kcal Atomic # 6 Polarization: 12.98 SS G_CDS: 4.84 Total: 17.82 kcal Atomic # 7 Polarization: 58.34 SS G_CDS: -3.58 Total: 54.76 kcal Atomic # 8 Polarization: 26.54 SS G_CDS: -3.61 Total: 22.94 kcal Atomic # 14 Polarization: -12.80 SS G_CDS: 2.10 Total: -10.70 kcal Total: -87.84 -2.08 -89.92 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608376_10543058.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 127.894 kcal (2) G-P(sol) polarization free energy of solvation -87.836 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.057 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.084 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -89.920 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.974 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds