Wall clock time and date at job start Sun Mar 7 2021 09:03:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.38418 * 119.89112 * 119.73068 * 4 2 1 6 6 C 1.38253 * 120.34226 * 179.72670 * 5 4 2 7 7 C 1.38276 * 120.11076 * 0.54363 * 6 5 4 8 8 F 1.35105 * 120.10822 * 179.74791 * 7 6 5 9 9 C 1.39856 * 119.78310 * 359.73276 * 7 6 5 10 10 C 1.47698 * 120.16730 * 179.97438 * 9 7 6 11 11 O 1.21568 * 120.00006 * 0.02562 * 10 9 7 12 12 N 1.34773 * 120.00088 * 180.02562 * 10 9 7 13 13 C 1.46501 * 120.00061 * 179.97438 * 12 10 9 14 14 H 1.09004 * 109.47045 * 35.00379 * 13 12 10 15 15 C 1.53002 * 109.47174 * 155.00085 * 13 12 10 16 16 C 1.52998 * 109.47343 * 180.02562 * 15 13 12 17 17 C 1.53007 * 109.46981 * 300.00066 * 16 15 13 18 18 H 1.09003 * 109.46726 * 299.99706 * 17 16 15 19 19 N 1.46896 * 109.47014 * 179.97438 * 17 16 15 20 20 H 1.00898 * 109.48374 * 299.98157 * 19 17 16 21 21 C 1.46940 * 109.47476 * 179.97438 * 19 17 16 22 22 C 1.53079 * 109.37597 * 179.97438 * 21 19 17 23 23 O 1.43028 * 109.24802 * 57.64556 * 22 21 19 24 24 C 1.43038 * 113.65193 * 302.09469 * 23 22 21 25 25 C 1.46939 * 109.48044 * 60.00253 * 19 17 16 26 26 C 1.53002 * 109.47136 * 59.99807 * 17 16 15 27 27 C 1.52993 * 109.47368 * 275.00288 * 13 12 10 28 28 C 1.37900 * 119.89499 * 300.00379 * 4 2 1 29 29 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 30 30 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 31 31 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 32 32 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 33 33 H 1.08004 * 119.82895 * 359.97438 * 5 4 2 34 34 H 1.07997 * 119.94305 * 180.27257 * 6 5 4 35 35 H 0.97001 * 120.00047 * 359.97438 * 12 10 9 36 36 H 1.09008 * 109.47119 * 299.99812 * 15 13 12 37 37 H 1.08994 * 109.47416 * 60.00257 * 15 13 12 38 38 H 1.09003 * 109.47150 * 59.99512 * 16 15 13 39 39 H 1.08994 * 109.47796 * 179.97438 * 16 15 13 40 40 H 1.09000 * 109.48858 * 299.96071 * 21 19 17 41 41 H 1.08997 * 109.48591 * 60.02480 * 21 19 17 42 42 H 1.08993 * 109.50783 * 297.71123 * 22 21 19 43 43 H 1.09001 * 109.50612 * 177.57789 * 22 21 19 44 44 H 1.09004 * 109.50363 * 297.97565 * 24 23 22 45 45 H 1.08992 * 109.50741 * 177.84231 * 24 23 22 46 46 H 1.09008 * 109.48323 * 299.97768 * 25 19 17 47 47 H 1.08998 * 109.48819 * 60.01273 * 25 19 17 48 48 H 1.08995 * 109.46915 * 59.99930 * 26 17 16 49 49 H 1.09001 * 109.46765 * 180.02562 * 26 17 16 50 50 H 1.09003 * 109.46729 * 299.99670 * 27 13 12 51 51 H 1.08999 * 109.47617 * 59.99366 * 27 13 12 52 52 H 1.07997 * 120.05428 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7223 -0.0340 -2.1429 6 6 3.1929 -0.6783 -3.2720 7 6 2.8660 -2.0020 -3.5023 8 9 3.3218 -2.6300 -4.6083 9 6 2.0624 -2.6886 -2.5865 10 6 1.7075 -4.1024 -2.8244 11 8 2.1146 -4.6724 -3.8180 12 7 0.9324 -4.7607 -1.9400 13 6 0.5800 -6.1629 -2.1762 14 1 1.4159 -6.6717 -2.6564 15 6 0.2683 -6.8423 -0.8412 16 6 -0.0991 -8.3069 -1.0879 17 6 -1.3286 -8.3783 -1.9958 18 1 -2.1648 -7.8698 -1.5158 19 7 -1.6811 -9.7845 -2.2331 20 1 -0.9072 -10.2550 -2.6779 21 6 -2.8621 -9.8532 -3.1046 22 6 -3.2270 -11.3193 -3.3509 23 8 -3.4620 -11.9640 -2.0959 24 6 -2.3471 -11.9029 -1.2018 25 6 -1.9803 -10.4377 -0.9514 26 6 -1.0169 -7.6989 -3.3308 27 6 -0.6495 -6.2338 -3.0839 28 6 1.5968 -2.0307 -1.4465 29 1 -0.3934 0.4417 -0.7651 30 1 1.7923 -0.5139 0.8900 31 1 1.5879 2.4585 -1.2243 32 1 1.5615 2.4679 1.2085 33 1 2.9765 1.0013 -1.9699 34 1 3.8133 -0.1456 -3.9774 35 1 0.6079 -4.3060 -1.1469 36 1 1.1444 -6.7919 -0.1946 37 1 -0.5675 -6.3337 -0.3611 38 1 0.7370 -8.8154 -1.5679 39 1 -0.3208 -8.7911 -0.1369 40 1 -3.6987 -9.3459 -2.6240 41 1 -2.6408 -9.3691 -4.0558 42 1 -2.4063 -11.8167 -3.8676 43 1 -4.1282 -11.3724 -3.9618 44 1 -1.4963 -12.4203 -1.6451 45 1 -2.6115 -12.3785 -0.2574 46 1 -1.1044 -10.3873 -0.3044 47 1 -2.8168 -9.9300 -0.4711 48 1 -0.1808 -8.2074 -3.8107 49 1 -1.8930 -7.7494 -3.9774 50 1 -1.4854 -5.7251 -2.6036 51 1 -0.4276 -5.7497 -4.0349 52 1 0.9761 -2.5548 -0.7349 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608376_12335834.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:03:01 Heat of formation + Delta-G solvation = -18.687628 kcal Electronic energy + Delta-G solvation = -33955.261512 eV Core-core repulsion = 29340.201909 eV Total energy + Delta-G solvation = -4615.059602 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.191 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -50.06688 -43.39086 -41.49438 -40.24781 -39.32413 -37.75432 -37.53173 -35.05540 -33.28334 -32.87485 -32.34093 -31.78931 -30.55592 -28.16555 -26.68337 -26.09914 -25.54585 -23.90830 -23.58891 -23.51558 -22.70790 -21.64931 -21.29873 -19.36595 -18.90656 -18.44866 -18.41633 -18.14731 -17.78676 -17.61050 -17.03119 -16.99816 -16.95584 -16.56535 -16.26508 -16.17663 -16.08163 -16.01248 -15.73102 -15.30565 -15.25299 -14.83357 -14.58991 -14.43868 -14.30579 -14.20102 -13.94029 -13.91852 -13.61521 -13.34338 -13.22617 -12.96880 -12.94038 -12.86896 -12.77369 -12.56735 -12.36002 -12.31830 -11.89218 -11.80386 -11.72648 -11.49510 -11.24372 -11.00949 -10.70202 -10.46127 -10.16186 -9.87377 -4.93063 -0.54296 -0.07629 0.63096 1.26863 1.56239 1.57181 1.90157 1.98109 2.43128 2.47374 2.54772 2.65344 2.94254 3.00132 3.13172 3.28670 3.34668 3.38479 3.43195 3.45756 3.57124 3.63529 3.67672 3.77917 3.84513 3.88949 3.97113 4.03664 4.06078 4.09578 4.11068 4.19929 4.29024 4.32839 4.43476 4.48513 4.52742 4.56944 4.58290 4.65252 4.66120 4.72564 4.75230 4.78331 4.80895 4.88804 4.91452 4.97457 5.00375 5.09669 5.14599 5.19424 5.39361 5.54764 5.90193 6.30203 6.44576 7.00879 Molecular weight = 366.19amu Principal moments of inertia in cm(-1) A = 0.016806 B = 0.002015 C = 0.001872 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1665.679260 B =13895.869243 C =14952.172026 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.061 4.061 3 Si 0.741 3.259 4 C -0.132 4.132 5 C -0.055 4.055 6 C -0.158 4.158 7 C 0.132 3.868 8 F -0.137 7.137 9 C -0.190 4.190 10 C 0.559 3.441 11 O -0.568 6.568 12 N -0.708 5.708 13 C 0.133 3.867 14 H 0.071 0.929 15 C -0.120 4.120 16 C -0.136 4.136 17 C 0.045 3.955 18 H 0.159 0.841 19 N -0.369 5.369 20 H 0.433 0.567 21 C -0.036 4.036 22 C 0.029 3.971 23 O -0.401 6.401 24 C 0.028 3.972 25 C -0.035 4.035 26 C -0.135 4.135 27 C -0.128 4.128 28 C -0.019 4.019 29 H 0.388 0.612 30 H 0.143 0.857 31 H -0.284 1.284 32 H -0.309 1.309 33 H 0.159 0.841 34 H 0.159 0.841 35 H 0.415 0.585 36 H 0.081 0.919 37 H 0.097 0.903 38 H 0.095 0.905 39 H 0.121 0.879 40 H 0.145 0.855 41 H 0.157 0.843 42 H 0.086 0.914 43 H 0.125 0.875 44 H 0.086 0.914 45 H 0.127 0.873 46 H 0.166 0.834 47 H 0.145 0.855 48 H 0.090 0.910 49 H 0.108 0.892 50 H 0.087 0.913 51 H 0.044 0.956 52 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.648 -19.808 4.907 22.572 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.172 4.172 3 Si 0.648 3.352 4 C -0.132 4.132 5 C -0.073 4.073 6 C -0.177 4.177 7 C 0.112 3.888 8 F -0.116 7.116 9 C -0.194 4.194 10 C 0.346 3.654 11 O -0.448 6.448 12 N -0.361 5.361 13 C 0.029 3.971 14 H 0.089 0.911 15 C -0.159 4.159 16 C -0.173 4.173 17 C -0.057 4.057 18 H 0.176 0.824 19 N 0.052 4.948 20 H 0.271 0.729 21 C -0.158 4.158 22 C -0.047 4.047 23 O -0.319 6.319 24 C -0.049 4.049 25 C -0.157 4.157 26 C -0.173 4.173 27 C -0.167 4.167 28 C -0.038 4.038 29 H 0.238 0.762 30 H 0.161 0.839 31 H -0.211 1.211 32 H -0.237 1.237 33 H 0.176 0.824 34 H 0.176 0.824 35 H 0.253 0.747 36 H 0.100 0.900 37 H 0.115 0.885 38 H 0.114 0.886 39 H 0.140 0.860 40 H 0.163 0.837 41 H 0.175 0.825 42 H 0.104 0.896 43 H 0.143 0.857 44 H 0.105 0.895 45 H 0.145 0.855 46 H 0.183 0.817 47 H 0.163 0.837 48 H 0.109 0.891 49 H 0.126 0.874 50 H 0.106 0.894 51 H 0.063 0.937 52 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -9.860 -19.720 4.882 22.582 hybrid contribution -0.309 0.458 -1.133 1.260 sum -10.169 -19.263 3.749 22.102 Atomic orbital electron populations 1.86581 1.17799 1.80029 1.50502 1.24921 0.83710 1.10109 0.98455 0.94243 0.90818 0.73536 0.76554 1.20370 1.00034 0.94967 0.97844 1.21371 0.93706 1.00652 0.91538 1.21367 1.03350 0.92351 1.00632 1.18207 0.95396 0.91679 0.83561 1.91562 1.86663 1.82640 1.50685 1.20118 1.05325 0.95357 0.98632 1.18135 0.78360 0.85884 0.82977 1.90850 1.55117 1.69219 1.29588 1.45833 1.51184 1.13604 1.25453 1.21322 0.97579 0.80362 0.97843 0.91081 1.21729 1.04190 0.95290 0.94668 1.22080 0.96240 0.97460 1.01561 1.23410 1.03613 0.78890 0.99745 0.82390 1.45412 1.17591 1.15626 1.16188 0.72875 1.24559 0.89349 1.01880 0.99974 1.23289 1.05835 0.89076 0.86532 1.88323 1.39166 1.77508 1.26938 1.23335 0.90679 0.93839 0.97057 1.24614 1.10071 0.96034 0.84934 1.22027 1.04941 0.95069 0.95301 1.21827 0.97982 0.97066 0.99826 1.21193 0.95228 0.93531 0.93808 0.76211 0.83911 1.21091 1.23697 0.82398 0.82357 0.74673 0.90043 0.88464 0.88650 0.86041 0.83741 0.82498 0.89569 0.85736 0.89540 0.85507 0.81682 0.83690 0.89110 0.87397 0.89400 0.93678 0.81506 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 11.21 12.76 -148.98 -1.90 9.31 16 2 C -0.06 1.42 2.82 71.24 0.20 1.62 16 3 Si 0.74 -14.61 29.78 68.60 2.04 -12.57 16 4 C -0.13 2.97 5.39 -19.90 -0.11 2.86 16 5 C -0.06 1.16 8.66 22.32 0.19 1.35 16 6 C -0.16 2.72 10.01 22.28 0.22 2.94 16 7 C 0.13 -1.64 7.29 22.67 0.17 -1.47 16 8 F -0.14 0.73 15.55 44.97 0.70 1.43 16 9 C -0.19 3.28 5.88 -20.05 -0.12 3.16 16 10 C 0.56 -9.66 7.73 86.74 0.67 -8.99 16 11 O -0.57 4.52 15.00 -3.93 -0.06 4.46 16 12 N -0.71 20.42 5.03 -445.56 -2.24 18.18 16 13 C 0.13 -4.71 2.45 44.99 0.11 -4.60 16 14 H 0.07 -2.12 7.58 -2.38 -0.02 -2.14 16 15 C -0.12 5.39 5.39 30.59 0.16 5.56 16 16 C -0.14 7.32 4.89 30.60 0.15 7.47 16 17 C 0.05 -2.61 1.62 44.92 0.07 -2.54 16 18 H 0.16 -9.53 8.14 -2.39 -0.02 -9.55 16 19 N -0.37 22.71 0.24 -870.39 -0.21 22.50 16 20 H 0.43 -28.10 8.32 -89.70 -0.75 -28.84 16 21 C -0.04 2.07 4.93 86.32 0.43 2.49 16 22 C 0.03 -1.45 6.96 72.01 0.50 -0.94 16 23 O -0.40 16.76 10.84 -148.98 -1.62 15.15 16 24 C 0.03 -1.38 6.96 72.02 0.50 -0.88 16 25 C -0.04 2.08 4.94 86.33 0.43 2.50 16 26 C -0.14 6.76 4.90 30.61 0.15 6.91 16 27 C -0.13 4.91 5.50 30.61 0.17 5.08 16 28 C -0.02 0.45 9.09 22.52 0.20 0.65 16 29 H 0.39 -9.73 8.70 -74.06 -0.64 -10.37 16 30 H 0.14 -3.75 7.96 -2.38 -0.02 -3.77 16 31 H -0.28 4.28 7.11 99.48 0.71 4.99 16 32 H -0.31 3.05 7.11 99.48 0.71 3.75 16 33 H 0.16 -3.86 4.85 -2.91 -0.01 -3.88 16 34 H 0.16 -3.09 8.06 -2.91 -0.02 -3.11 16 35 H 0.41 -14.16 6.64 -92.71 -0.62 -14.78 16 36 H 0.08 -3.35 8.14 -2.38 -0.02 -3.37 16 37 H 0.10 -4.57 8.14 -2.39 -0.02 -4.59 16 38 H 0.09 -5.10 8.14 -2.39 -0.02 -5.12 16 39 H 0.12 -7.07 6.29 -2.39 -0.02 -7.08 16 40 H 0.14 -8.38 8.14 -2.39 -0.02 -8.40 16 41 H 0.16 -9.43 6.15 -2.39 -0.01 -9.45 16 42 H 0.09 -4.38 8.14 -2.39 -0.02 -4.40 16 43 H 0.12 -5.75 8.14 -2.39 -0.02 -5.77 16 44 H 0.09 -4.48 8.14 -2.38 -0.02 -4.50 16 45 H 0.13 -6.02 8.14 -2.39 -0.02 -6.04 16 46 H 0.17 -10.45 6.15 -2.38 -0.01 -10.47 16 47 H 0.15 -8.63 8.14 -2.39 -0.02 -8.65 16 48 H 0.09 -4.45 8.14 -2.39 -0.02 -4.47 16 49 H 0.11 -5.66 6.29 -2.39 -0.02 -5.67 16 50 H 0.09 -3.55 8.14 -2.39 -0.02 -3.57 16 51 H 0.04 -1.26 8.14 -2.39 -0.02 -1.28 16 52 H 0.17 -5.06 6.40 -2.91 -0.02 -5.08 16 Total: 1.00 -83.79 398.06 -0.18 -83.96 By element: Atomic # 1 Polarization: -164.60 SS G_CDS: -1.00 Total: -165.60 kcal Atomic # 6 Polarization: 19.07 SS G_CDS: 4.10 Total: 23.17 kcal Atomic # 7 Polarization: 43.13 SS G_CDS: -2.45 Total: 40.68 kcal Atomic # 8 Polarization: 32.50 SS G_CDS: -3.58 Total: 28.92 kcal Atomic # 9 Polarization: 0.73 SS G_CDS: 0.70 Total: 1.43 kcal Atomic # 14 Polarization: -14.61 SS G_CDS: 2.04 Total: -12.57 kcal Total: -83.79 -0.18 -83.96 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608376_12335834.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.277 kcal (2) G-P(sol) polarization free energy of solvation -83.787 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.177 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -83.964 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.688 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds