Wall clock time and date at job start Sun Mar 7 2021 09:04:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86295 * 109.47349 * 2 1 4 4 C 1.50704 * 109.46617 * 119.99860 * 2 1 3 5 5 C 1.38587 * 120.32485 * 65.00273 * 4 2 1 6 6 C 1.38630 * 118.48627 * 180.02562 * 5 4 2 7 7 C 1.39272 * 119.06172 * 359.97438 * 6 5 4 8 8 C 1.48172 * 119.72190 * 179.97438 * 7 6 5 9 9 O 1.21510 * 119.99679 * 0.02562 * 8 7 6 10 10 N 1.34770 * 119.99905 * 179.97438 * 8 7 6 11 11 C 1.46502 * 119.99862 * 180.02562 * 10 8 7 12 12 H 1.08994 * 109.46967 * 325.00070 * 11 10 8 13 13 C 1.52997 * 109.46912 * 85.00114 * 11 10 8 14 14 C 1.53003 * 109.47164 * 179.97438 * 13 11 10 15 15 C 1.53000 * 109.47197 * 300.00096 * 14 13 11 16 16 H 1.08997 * 109.46982 * 300.00007 * 15 14 13 17 17 N 1.46902 * 109.47175 * 179.97438 * 15 14 13 18 18 H 1.00897 * 109.48603 * 180.02562 * 17 15 14 19 19 C 1.46942 * 109.47359 * 60.00475 * 17 15 14 20 20 C 1.53076 * 109.37360 * 179.97438 * 19 17 15 21 21 O 1.43032 * 109.24719 * 57.64095 * 20 19 17 22 22 C 1.43033 * 113.65408 * 302.08962 * 21 20 19 23 23 C 1.46936 * 109.48129 * 300.04692 * 17 15 14 24 24 C 1.53010 * 109.47029 * 59.99687 * 15 14 13 25 25 C 1.52993 * 109.47007 * 300.00196 * 24 15 14 26 26 N 1.32739 * 120.55560 * 0.25788 * 7 6 5 27 27 C 1.31503 * 121.64173 * 359.47457 * 26 7 6 28 28 H 0.96700 * 114.00494 * 300.00603 * 1 2 3 29 29 H 1.08998 * 109.46682 * 239.99514 * 2 1 3 30 30 H 1.48502 * 110.00255 * 178.68100 * 3 2 1 31 31 H 1.48501 * 109.99820 * 299.99749 * 3 2 1 32 32 H 1.08001 * 120.75580 * 359.97438 * 5 4 2 33 33 H 1.07998 * 120.47077 * 180.02562 * 6 5 4 34 34 H 0.97000 * 120.00052 * 359.97438 * 10 8 7 35 35 H 1.08996 * 109.47396 * 299.99638 * 13 11 10 36 36 H 1.09002 * 109.47186 * 60.00468 * 13 11 10 37 37 H 1.08995 * 109.47520 * 179.97438 * 14 13 11 38 38 H 1.08997 * 109.47160 * 59.99995 * 14 13 11 39 39 H 1.08998 * 109.48969 * 60.01519 * 19 17 15 40 40 H 1.09003 * 109.48597 * 299.95770 * 19 17 15 41 41 H 1.08996 * 109.50377 * 177.57245 * 20 19 17 42 42 H 1.08990 * 109.50614 * 297.70698 * 20 19 17 43 43 H 1.09000 * 109.50652 * 177.83671 * 22 21 20 44 44 H 1.08992 * 109.50876 * 297.98024 * 22 21 20 45 45 H 1.08999 * 109.48435 * 60.03728 * 23 17 15 46 46 H 1.08996 * 109.50141 * 299.98996 * 23 17 15 47 47 H 1.09005 * 109.46822 * 60.00034 * 24 15 14 48 48 H 1.09000 * 109.47031 * 179.97438 * 24 15 14 49 49 H 1.09005 * 109.46960 * 180.02562 * 25 24 15 50 50 H 1.09005 * 109.47197 * 299.99608 * 25 24 15 51 51 H 1.08002 * 119.54485 * 180.26771 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.6878 -2.0634 1.4057 6 6 2.1668 -2.6785 2.5521 7 6 2.8725 -1.9195 3.4825 8 6 3.3906 -2.5618 4.7131 9 8 3.1994 -3.7460 4.9070 10 7 4.0747 -1.8328 5.6169 11 6 4.5874 -2.4680 6.8334 12 1 3.8877 -3.2349 7.1654 13 6 5.9454 -3.1091 6.5405 14 6 6.4812 -3.7720 7.8111 15 6 6.6411 -2.7174 8.9080 16 1 7.3407 -1.9505 8.5755 17 7 7.1549 -3.3539 10.1282 18 1 7.2600 -2.6587 10.8518 19 6 8.4591 -3.9699 9.8473 20 6 8.9927 -4.6319 11.1203 21 8 8.0442 -5.5975 11.5827 22 6 6.7499 -5.0493 11.8476 23 6 6.2120 -4.3882 10.5757 24 6 5.2830 -2.0762 9.2009 25 6 4.7473 -1.4134 7.9303 26 7 3.0801 -0.6244 3.2787 27 6 2.6414 -0.0171 2.1979 28 1 -0.3934 0.4418 0.7650 29 1 1.7922 -0.5139 -0.8899 30 1 3.5346 1.7702 0.0321 31 1 1.5616 2.4678 -1.2085 32 1 1.1367 -2.6257 0.6664 33 1 1.9958 -3.7314 2.7209 34 1 4.2283 -0.8877 5.4616 35 1 5.8316 -3.8601 5.7588 36 1 6.6452 -2.3422 6.2085 37 1 7.4484 -4.2291 7.6024 38 1 5.7816 -4.5388 8.1436 39 1 9.1594 -3.2035 9.5153 40 1 8.3454 -4.7219 9.0664 41 1 9.9395 -5.1265 10.9038 42 1 9.1445 -3.8738 11.8885 43 1 6.0736 -5.8460 12.1575 44 1 6.8250 -4.3055 12.6407 45 1 6.0992 -5.1399 9.7945 46 1 5.2441 -3.9324 10.7842 47 1 4.5833 -2.8431 9.5334 48 1 5.3968 -1.3252 9.9827 49 1 3.7800 -0.9563 8.1391 50 1 5.4470 -0.6465 7.5979 51 1 2.8333 1.0374 2.0646 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608376_13287726.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:04:57 Heat of formation + Delta-G solvation = 36.192585 kcal Electronic energy + Delta-G solvation = -31259.051779 eV Core-core repulsion = 27050.400025 eV Total energy + Delta-G solvation = -4208.651753 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.196 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -43.49697 -41.95170 -40.63689 -39.32347 -37.95117 -37.62757 -35.00209 -33.76463 -33.05004 -32.97745 -32.06299 -30.71660 -28.62749 -27.50158 -25.96282 -25.08817 -24.65873 -24.27889 -23.15462 -22.67592 -21.76466 -20.99541 -19.29639 -18.82033 -18.65478 -18.57707 -17.94710 -17.79295 -17.12048 -16.98970 -16.78602 -16.54078 -16.45376 -16.36452 -16.08277 -15.97030 -15.51066 -15.40044 -15.05292 -14.65941 -14.52085 -14.38666 -14.31441 -13.98996 -13.83062 -13.65048 -13.60738 -13.33448 -13.11824 -12.97470 -12.86294 -12.59590 -12.47104 -12.24225 -12.20413 -11.86726 -11.61141 -11.56027 -11.47638 -11.10786 -10.98858 -10.75997 -10.61410 -10.40791 -10.12680 -5.06122 -0.65359 0.00856 0.66424 1.20246 1.47489 1.59221 1.89559 1.97011 2.51102 2.56474 2.60946 2.66794 2.87503 2.89781 3.14777 3.35086 3.38991 3.40540 3.47435 3.58968 3.65881 3.69635 3.73844 3.79082 3.85882 3.89286 3.90522 4.04725 4.07934 4.09045 4.15178 4.20770 4.28168 4.35088 4.41614 4.48898 4.51813 4.53287 4.60363 4.63654 4.66412 4.74990 4.79817 4.83992 4.91565 4.95403 4.97901 5.02247 5.15749 5.21026 5.31336 5.41280 5.92040 6.20435 6.53456 6.67424 6.99396 Molecular weight = 349.20amu Principal moments of inertia in cm(-1) A = 0.029729 B = 0.001894 C = 0.001852 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 941.628345 B =14779.197839 C =15118.167200 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.073 4.073 3 Si 0.778 3.222 4 C -0.143 4.143 5 C -0.058 4.058 6 C -0.119 4.119 7 C 0.061 3.939 8 C 0.573 3.427 9 O -0.564 6.564 10 N -0.698 5.698 11 C 0.131 3.869 12 H 0.075 0.925 13 C -0.127 4.127 14 C -0.138 4.138 15 C 0.044 3.956 16 H 0.169 0.831 17 N -0.362 5.362 18 H 0.443 0.557 19 C -0.037 4.037 20 C 0.029 3.971 21 O -0.403 6.403 22 C 0.032 3.968 23 C -0.046 4.046 24 C -0.135 4.135 25 C -0.121 4.121 26 N -0.453 5.453 27 C 0.104 3.896 28 H 0.398 0.602 29 H 0.115 0.885 30 H -0.274 1.274 31 H -0.304 1.304 32 H 0.153 0.847 33 H 0.147 0.853 34 H 0.420 0.580 35 H 0.046 0.954 36 H 0.086 0.914 37 H 0.103 0.897 38 H 0.088 0.912 39 H 0.170 0.830 40 H 0.133 0.867 41 H 0.123 0.877 42 H 0.093 0.907 43 H 0.122 0.878 44 H 0.094 0.906 45 H 0.133 0.867 46 H 0.164 0.836 47 H 0.095 0.905 48 H 0.123 0.877 49 H 0.079 0.921 50 H 0.095 0.905 51 H 0.190 0.810 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 13.246 1.270 22.818 26.414 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.184 4.184 3 Si 0.683 3.317 4 C -0.146 4.146 5 C -0.084 4.084 6 C -0.140 4.140 7 C -0.077 4.077 8 C 0.358 3.642 9 O -0.442 6.442 10 N -0.349 5.349 11 C 0.027 3.973 12 H 0.093 0.907 13 C -0.166 4.166 14 C -0.176 4.176 15 C -0.057 4.057 16 H 0.187 0.813 17 N 0.058 4.942 18 H 0.283 0.717 19 C -0.159 4.159 20 C -0.048 4.048 21 O -0.322 6.322 22 C -0.045 4.045 23 C -0.168 4.168 24 C -0.172 4.172 25 C -0.159 4.159 26 N -0.164 5.164 27 C -0.055 4.055 28 H 0.248 0.752 29 H 0.132 0.868 30 H -0.201 1.201 31 H -0.233 1.233 32 H 0.170 0.830 33 H 0.165 0.835 34 H 0.258 0.742 35 H 0.064 0.936 36 H 0.105 0.895 37 H 0.122 0.878 38 H 0.106 0.894 39 H 0.188 0.812 40 H 0.151 0.849 41 H 0.141 0.859 42 H 0.111 0.889 43 H 0.139 0.861 44 H 0.112 0.888 45 H 0.151 0.849 46 H 0.181 0.819 47 H 0.114 0.886 48 H 0.141 0.859 49 H 0.098 0.902 50 H 0.114 0.886 51 H 0.206 0.794 Dipole moment (debyes) X Y Z Total from point charges 14.182 0.775 22.546 26.647 hybrid contribution -0.756 -0.699 -1.519 1.835 sum 13.426 0.076 21.026 24.948 Atomic orbital electron populations 1.86533 1.16800 1.82086 1.50652 1.25193 0.85594 1.11113 0.96454 0.93915 0.78037 0.74054 0.85666 1.21737 0.98908 0.95565 0.98371 1.21731 0.95692 0.94284 0.96700 1.22280 0.95902 1.02296 0.93540 1.21236 0.99435 0.90824 0.96205 1.17905 0.77957 0.85568 0.82724 1.90798 1.59689 1.16252 1.77469 1.45862 1.54119 1.14249 1.20648 1.21379 0.95449 0.96448 0.83991 0.90654 1.21816 0.96266 1.00674 0.97845 1.22077 1.04502 0.97567 0.93427 1.23435 1.01043 0.97963 0.83286 0.81344 1.45282 1.14660 1.16875 1.17428 0.71747 1.24588 0.84197 1.04463 1.02642 1.23320 0.93925 0.93591 0.93937 1.88322 1.21470 1.36036 1.86362 1.23292 0.84973 1.01504 0.94729 1.24627 0.96517 0.93857 1.01844 1.22071 0.93666 1.02520 0.98980 1.21715 1.03878 0.97294 0.93016 1.67516 1.18372 1.08844 1.21630 1.23001 0.93468 1.00802 0.88258 0.75212 0.86771 1.20074 1.23255 0.82975 0.83513 0.74204 0.93550 0.89513 0.87833 0.89375 0.81191 0.84875 0.85870 0.88899 0.86053 0.88815 0.84942 0.81876 0.88649 0.85877 0.90227 0.88619 0.79403 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 8.77 12.84 -148.98 -1.91 6.86 16 2 C -0.07 1.30 2.82 71.24 0.20 1.50 16 3 Si 0.78 -14.86 29.83 68.60 2.05 -12.81 16 4 C -0.14 2.58 5.37 -19.69 -0.11 2.48 16 5 C -0.06 0.94 9.83 22.45 0.22 1.16 16 6 C -0.12 1.77 9.63 22.61 0.22 1.98 16 7 C 0.06 -0.96 6.75 41.90 0.28 -0.68 16 8 C 0.57 -9.92 7.78 86.88 0.68 -9.24 16 9 O -0.56 6.17 15.99 -3.75 -0.06 6.11 16 10 N -0.70 18.73 5.07 -445.11 -2.25 16.48 16 11 C 0.13 -4.59 2.46 44.99 0.11 -4.48 16 12 H 0.08 -2.31 7.58 -2.39 -0.02 -2.33 16 13 C -0.13 4.84 5.49 30.59 0.17 5.00 16 14 C -0.14 6.77 4.36 30.60 0.13 6.91 16 15 C 0.04 -2.58 2.08 44.92 0.09 -2.49 16 16 H 0.17 -10.48 8.14 -2.39 -0.02 -10.50 16 17 N -0.36 22.50 0.40 -870.39 -0.35 22.16 16 18 H 0.44 -30.18 8.38 -89.70 -0.75 -30.93 16 19 C -0.04 2.16 4.94 86.32 0.43 2.59 16 20 C 0.03 -1.44 6.96 72.01 0.50 -0.94 16 21 O -0.40 16.63 10.84 -148.98 -1.62 15.01 16 22 C 0.03 -1.56 6.97 72.02 0.50 -1.06 16 23 C -0.05 2.63 4.57 86.33 0.39 3.02 16 24 C -0.13 7.28 4.90 30.60 0.15 7.43 16 25 C -0.12 5.31 5.39 30.59 0.16 5.48 16 26 N -0.45 8.26 9.54 -184.90 -1.76 6.50 16 27 C 0.10 -2.06 9.84 84.83 0.83 -1.22 16 28 H 0.40 -9.59 8.70 -74.06 -0.64 -10.23 16 29 H 0.11 -1.89 7.96 -2.39 -0.02 -1.91 16 30 H -0.27 4.24 7.11 99.48 0.71 4.95 16 31 H -0.30 2.82 7.11 99.48 0.71 3.52 16 32 H 0.15 -2.66 8.06 -2.91 -0.02 -2.69 16 33 H 0.15 -2.13 7.64 -2.91 -0.02 -2.15 16 34 H 0.42 -12.25 7.93 -92.71 -0.74 -12.99 16 35 H 0.05 -1.30 8.14 -2.39 -0.02 -1.32 16 36 H 0.09 -3.44 8.14 -2.39 -0.02 -3.46 16 37 H 0.10 -5.25 6.29 -2.39 -0.02 -5.27 16 38 H 0.09 -4.22 6.28 -2.39 -0.02 -4.24 16 39 H 0.17 -10.76 8.14 -2.39 -0.02 -10.78 16 40 H 0.13 -7.47 6.15 -2.39 -0.01 -7.48 16 41 H 0.12 -5.74 8.14 -2.39 -0.02 -5.76 16 42 H 0.09 -4.90 8.14 -2.39 -0.02 -4.91 16 43 H 0.12 -5.54 8.14 -2.39 -0.02 -5.56 16 44 H 0.09 -4.90 8.14 -2.39 -0.02 -4.92 16 45 H 0.13 -7.19 6.15 -2.39 -0.01 -7.20 16 46 H 0.16 -9.86 6.15 -2.39 -0.01 -9.87 16 47 H 0.10 -5.15 6.28 -2.38 -0.01 -5.17 16 48 H 0.12 -7.17 8.14 -2.39 -0.02 -7.19 16 49 H 0.08 -3.18 8.14 -2.38 -0.02 -3.20 16 50 H 0.10 -4.38 8.14 -2.38 -0.02 -4.40 16 51 H 0.19 -4.76 4.92 -2.91 -0.01 -4.77 16 Total: 1.00 -80.95 386.88 -2.05 -83.00 By element: Atomic # 1 Polarization: -159.63 SS G_CDS: -1.12 Total: -160.75 kcal Atomic # 6 Polarization: 12.47 SS G_CDS: 4.97 Total: 17.44 kcal Atomic # 7 Polarization: 49.50 SS G_CDS: -4.37 Total: 45.13 kcal Atomic # 8 Polarization: 31.57 SS G_CDS: -3.59 Total: 27.98 kcal Atomic # 14 Polarization: -14.86 SS G_CDS: 2.05 Total: -12.81 kcal Total: -80.95 -2.05 -83.00 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608376_13287726.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 119.193 kcal (2) G-P(sol) polarization free energy of solvation -80.947 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.246 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.054 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -83.001 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.193 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds