Wall clock time and date at job start Sun Mar 7 2021 09:05:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.36409 * 125.80580 * 2 1 4 4 C 1.47388 * 127.19055 * 359.97438 * 3 2 1 5 5 O 1.21609 * 119.99717 * 359.97438 * 4 3 2 6 6 N 1.34771 * 119.99685 * 179.97438 * 4 3 2 7 7 C 1.46507 * 119.99888 * 179.97438 * 6 4 3 8 8 H 1.08997 * 109.47021 * 325.00122 * 7 6 4 9 9 C 1.53004 * 109.47109 * 84.99788 * 7 6 4 10 10 C 1.52993 * 109.47027 * 180.02562 * 9 7 6 11 11 C 1.53000 * 109.47367 * 300.00264 * 10 9 7 12 12 H 1.08997 * 109.47064 * 300.00094 * 11 10 9 13 13 N 1.46897 * 109.47174 * 180.02562 * 11 10 9 14 14 H 1.00904 * 109.47866 * 299.98012 * 13 11 10 15 15 C 1.46936 * 109.47947 * 179.97438 * 13 11 10 16 16 C 1.53075 * 109.37684 * 179.97438 * 15 13 11 17 17 O 1.43031 * 109.25193 * 57.63884 * 16 15 13 18 18 C 1.43031 * 113.65200 * 302.09562 * 17 16 15 19 19 C 1.46942 * 109.47940 * 60.00038 * 13 11 10 20 20 C 1.52998 * 109.46968 * 59.99990 * 11 10 9 21 21 C 1.52994 * 109.47299 * 299.99858 * 20 11 10 22 22 C 1.47019 * 105.61961 * 179.77828 * 3 2 1 23 23 C 1.34183 * 105.95006 * 0.39206 * 22 3 2 24 24 C 1.50696 * 125.43561 * 179.86919 * 23 22 3 25 25 O 1.42903 * 109.47131 * 299.71135 * 24 23 22 26 26 Si 1.86305 * 109.47185 * 179.71675 * 24 23 22 27 27 O 1.33652 * 125.79804 * 180.02562 * 2 1 3 28 28 H 1.08996 * 109.47177 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47092 * 300.00526 * 1 2 3 30 30 H 1.09003 * 109.46749 * 60.00327 * 1 2 3 31 31 H 0.97000 * 120.00849 * 0.02562 * 6 4 3 32 32 H 1.08999 * 109.47440 * 300.00430 * 9 7 6 33 33 H 1.08997 * 109.46907 * 60.00264 * 9 7 6 34 34 H 1.09002 * 109.46956 * 180.02562 * 10 9 7 35 35 H 1.08997 * 109.47105 * 60.00332 * 10 9 7 36 36 H 1.09005 * 109.48449 * 299.95634 * 15 13 11 37 37 H 1.08996 * 109.48956 * 60.02064 * 15 13 11 38 38 H 1.09000 * 109.50848 * 297.70557 * 16 15 13 39 39 H 1.09006 * 109.50762 * 177.57554 * 16 15 13 40 40 H 1.08998 * 109.50697 * 297.97211 * 18 17 16 41 41 H 1.08993 * 109.50841 * 177.83599 * 18 17 16 42 42 H 1.08999 * 109.48370 * 299.97805 * 19 13 11 43 43 H 1.08994 * 109.48820 * 60.03778 * 19 13 11 44 44 H 1.09000 * 109.46706 * 180.02562 * 20 11 10 45 45 H 1.08997 * 109.47143 * 60.00153 * 20 11 10 46 46 H 1.08997 * 109.47264 * 300.00221 * 21 20 11 47 47 H 1.08996 * 109.47252 * 179.97438 * 21 20 11 48 48 H 1.07997 * 127.02804 * 180.29003 * 22 3 2 49 49 H 1.08999 * 109.47358 * 59.71494 * 24 23 22 50 50 H 0.96700 * 114.00311 * 300.00591 * 25 24 23 51 51 H 1.48497 * 110.00233 * 179.97438 * 26 24 23 52 52 H 1.48492 * 109.99800 * 301.31995 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3051 1.1063 0.0000 4 6 1.8741 2.5157 -0.0005 5 8 0.6891 2.7892 -0.0015 6 7 2.7932 3.5014 0.0001 7 6 2.3648 4.9024 -0.0010 8 1 1.4542 5.0035 -0.5915 9 6 2.0938 5.3540 1.4355 10 6 1.6458 6.8169 1.4343 11 6 2.7471 7.6870 0.8253 12 1 3.6578 7.5864 1.4157 13 7 2.3172 9.0917 0.8247 14 1 1.4742 9.1853 0.2782 15 6 3.3750 9.9276 0.2405 16 6 2.9243 11.3905 0.2404 17 8 2.6186 11.7899 1.5794 18 6 1.6092 10.9893 2.2006 19 6 2.0574 9.5252 2.2045 20 6 3.0180 7.2355 -0.6112 21 6 3.4661 5.7726 -0.6100 22 6 3.6849 0.5990 0.0055 23 6 3.5859 -0.7392 -0.0006 24 6 4.7458 -1.7012 -0.0011 25 8 5.5425 -1.4862 -1.1678 26 14 4.1025 -3.4497 -0.0020 27 8 2.2888 -1.0840 -0.0005 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5139 0.8899 30 1 -0.3633 0.5138 -0.8901 31 1 3.7384 3.2833 0.0005 32 1 1.3089 4.7344 1.8693 33 1 3.0044 5.2530 2.0260 34 1 1.4532 7.1387 2.4578 35 1 0.7351 6.9175 0.8439 36 1 4.2855 9.8274 0.8312 37 1 3.5681 9.6069 -0.7832 38 1 2.0368 11.4980 -0.3831 39 1 3.7244 12.0179 -0.1529 40 1 0.6767 11.0830 1.6442 41 1 1.4574 11.3261 3.2260 42 1 1.2725 8.9057 2.6385 43 1 2.9682 9.4251 2.7947 44 1 3.8029 7.8551 -1.0448 45 1 2.1073 7.3361 -1.2015 46 1 4.3768 5.6720 -0.0197 47 1 3.6587 5.4508 -1.6334 48 1 4.5929 1.1838 0.0114 49 1 5.3535 -1.5381 0.8890 50 1 5.0653 -1.6142 -1.9990 51 1 5.2367 -4.4082 -0.0031 52 1 3.2464 -3.6764 1.1899 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608376_13308374.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:05:18 Heat of formation + Delta-G solvation = 8.836493 kcal Electronic energy + Delta-G solvation = -32167.541581 eV Core-core repulsion = 27832.673438 eV Total energy + Delta-G solvation = -4334.868143 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.200 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -43.81011 -43.38057 -40.88389 -39.34478 -38.05235 -37.62968 -34.96875 -34.09202 -33.27767 -33.13227 -31.77946 -30.80777 -29.40842 -28.14331 -26.09162 -25.90409 -24.53666 -23.66280 -23.51629 -23.22696 -22.00903 -21.50532 -20.60271 -18.99690 -18.87037 -18.26203 -17.92171 -17.77366 -17.72747 -17.38618 -16.98939 -16.76302 -16.55236 -16.16639 -16.09435 -15.94341 -15.72389 -15.27474 -15.18490 -14.79756 -14.39243 -14.28999 -14.21273 -14.16630 -13.98582 -13.94101 -13.90970 -13.83631 -13.29122 -12.95928 -12.95109 -12.85867 -12.81192 -12.76955 -12.56807 -12.32912 -12.30451 -11.88663 -11.70615 -11.46324 -11.19549 -11.00452 -10.96502 -10.66630 -10.16179 -9.61111 -5.06492 0.19422 0.63646 0.79464 1.13344 1.36776 1.71168 1.87746 2.10454 2.21317 2.47940 2.55574 2.65957 2.95287 3.13616 3.18091 3.36112 3.39737 3.42588 3.60324 3.67312 3.71617 3.74726 3.79366 3.87679 3.90761 4.05256 4.06096 4.10808 4.12177 4.22061 4.27287 4.30551 4.33836 4.41406 4.51549 4.53177 4.55037 4.57841 4.60965 4.65761 4.66900 4.72589 4.77955 4.81413 4.90047 4.98727 5.01592 5.07021 5.17528 5.20437 5.21917 5.47242 5.87106 5.90745 6.42940 6.57930 7.12714 Molecular weight = 352.20amu Principal moments of inertia in cm(-1) A = 0.024112 B = 0.001960 C = 0.001877 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1160.958770 B =14279.581352 C =14912.538563 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.079 3.921 3 C -0.269 4.269 4 C 0.593 3.407 5 O -0.570 6.570 6 N -0.713 5.713 7 C 0.135 3.865 8 H 0.074 0.926 9 C -0.127 4.127 10 C -0.134 4.134 11 C 0.045 3.955 12 H 0.156 0.844 13 N -0.369 5.369 14 H 0.434 0.566 15 C -0.035 4.035 16 C 0.028 3.972 17 O -0.401 6.401 18 C 0.029 3.971 19 C -0.036 4.036 20 C -0.135 4.135 21 C -0.121 4.121 22 C -0.143 4.143 23 C -0.064 4.064 24 C -0.015 4.015 25 O -0.538 6.538 26 Si 0.761 3.239 27 O -0.177 6.177 28 H 0.090 0.910 29 H 0.094 0.906 30 H 0.098 0.902 31 H 0.412 0.588 32 H 0.048 0.952 33 H 0.082 0.918 34 H 0.107 0.893 35 H 0.093 0.907 36 H 0.144 0.856 37 H 0.165 0.835 38 H 0.087 0.913 39 H 0.127 0.873 40 H 0.087 0.913 41 H 0.125 0.875 42 H 0.159 0.841 43 H 0.143 0.857 44 H 0.119 0.881 45 H 0.097 0.903 46 H 0.092 0.908 47 H 0.078 0.922 48 H 0.182 0.818 49 H 0.141 0.859 50 H 0.400 0.600 51 H -0.285 1.285 52 H -0.297 1.297 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.513 24.155 -0.263 24.162 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C 0.025 3.975 3 C -0.274 4.274 4 C 0.381 3.619 5 O -0.451 6.451 6 N -0.364 5.364 7 C 0.031 3.969 8 H 0.093 0.907 9 C -0.166 4.166 10 C -0.172 4.172 11 C -0.057 4.057 12 H 0.173 0.827 13 N 0.052 4.948 14 H 0.272 0.728 15 C -0.157 4.157 16 C -0.049 4.049 17 O -0.320 6.320 18 C -0.047 4.047 19 C -0.157 4.157 20 C -0.172 4.172 21 C -0.159 4.159 22 C -0.162 4.162 23 C -0.111 4.111 24 C -0.127 4.127 25 O -0.346 6.346 26 Si 0.668 3.332 27 O -0.075 6.075 28 H 0.109 0.891 29 H 0.112 0.888 30 H 0.117 0.883 31 H 0.249 0.751 32 H 0.067 0.933 33 H 0.101 0.899 34 H 0.126 0.874 35 H 0.112 0.888 36 H 0.162 0.838 37 H 0.183 0.817 38 H 0.105 0.895 39 H 0.144 0.856 40 H 0.105 0.895 41 H 0.143 0.857 42 H 0.176 0.824 43 H 0.161 0.839 44 H 0.137 0.863 45 H 0.116 0.884 46 H 0.111 0.889 47 H 0.097 0.903 48 H 0.199 0.801 49 H 0.158 0.842 50 H 0.251 0.749 51 H -0.212 1.212 52 H -0.225 1.225 Dipole moment (debyes) X Y Z Total from point charges 0.351 23.563 0.816 23.580 hybrid contribution 0.081 -0.251 0.223 0.346 sum 0.432 23.311 1.040 23.339 Atomic orbital electron populations 1.20564 0.82807 1.04859 1.05036 1.23272 0.94789 0.83276 0.96115 1.21315 0.93778 0.94090 1.18189 1.17201 0.85341 0.84163 0.75167 1.90783 1.17872 1.84485 1.51975 1.45764 1.09875 1.05928 1.74797 1.21281 0.99215 0.79255 0.97118 0.90745 1.21814 1.02527 0.95962 0.96336 1.22017 0.97815 0.93317 1.04095 1.23402 1.02867 0.77314 1.02114 0.82662 1.45407 1.18673 1.14280 1.16414 0.72807 1.24599 0.92519 0.91755 1.06797 1.23329 1.04113 0.93281 0.84165 1.88323 1.58464 1.56722 1.28466 1.23300 0.91497 0.87393 1.02544 1.24566 1.10211 0.99323 0.81647 1.22066 1.05678 0.96380 0.93119 1.21716 0.97824 0.93642 1.02766 1.22785 0.96574 0.93238 1.03589 1.22875 0.82674 0.96338 1.09258 1.24234 0.89527 1.06174 0.92720 1.86537 1.38738 1.93204 1.16113 0.93394 0.79056 0.73381 0.87413 1.83697 1.16978 1.35402 1.71391 0.89088 0.88763 0.88320 0.75147 0.93323 0.89916 0.87436 0.88827 0.83823 0.81725 0.89452 0.85557 0.89468 0.85748 0.82383 0.83878 0.86271 0.88445 0.88926 0.90318 0.80084 0.84188 0.74903 1.21179 1.22458 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 1.26 9.14 71.24 0.65 1.91 16 2 C 0.08 -1.09 7.37 25.26 0.19 -0.90 16 3 C -0.27 4.36 6.31 -18.99 -0.12 4.24 16 4 C 0.59 -10.79 7.78 86.65 0.67 -10.12 16 5 O -0.57 6.99 15.32 -4.06 -0.06 6.93 16 6 N -0.71 20.08 5.07 -445.83 -2.26 17.82 16 7 C 0.14 -4.82 2.45 44.99 0.11 -4.71 16 8 H 0.07 -2.31 7.58 -2.39 -0.02 -2.33 16 9 C -0.13 4.94 5.49 30.59 0.17 5.11 16 10 C -0.13 6.79 4.90 30.59 0.15 6.94 16 11 C 0.04 -2.59 1.61 44.92 0.07 -2.52 16 12 H 0.16 -9.31 8.14 -2.39 -0.02 -9.33 16 13 N -0.37 22.75 0.24 -870.42 -0.21 22.54 16 14 H 0.43 -28.34 8.32 -89.69 -0.75 -29.08 16 15 C -0.04 2.08 4.93 86.32 0.43 2.51 16 16 C 0.03 -1.39 6.96 72.01 0.50 -0.89 16 17 O -0.40 16.84 10.84 -148.98 -1.62 15.22 16 18 C 0.03 -1.45 6.97 72.02 0.50 -0.95 16 19 C -0.04 2.07 4.94 86.33 0.43 2.49 16 20 C -0.13 7.25 4.90 30.59 0.15 7.40 16 21 C -0.12 5.35 5.39 30.59 0.16 5.52 16 22 C -0.14 2.71 10.46 23.65 0.25 2.96 16 23 C -0.06 1.03 6.20 24.76 0.15 1.19 16 24 C -0.01 0.26 2.97 71.23 0.21 0.48 16 25 O -0.54 9.79 12.87 -148.98 -1.92 7.87 16 26 Si 0.76 -11.17 32.09 68.60 2.20 -8.97 16 27 O -0.18 2.35 8.89 4.49 0.04 2.39 16 28 H 0.09 -1.67 8.14 -2.39 -0.02 -1.69 16 29 H 0.09 -1.51 8.08 -2.39 -0.02 -1.53 16 30 H 0.10 -1.63 8.08 -2.39 -0.02 -1.65 16 31 H 0.41 -13.13 7.77 -92.71 -0.72 -13.85 16 32 H 0.05 -1.42 8.14 -2.39 -0.02 -1.44 16 33 H 0.08 -3.30 8.14 -2.39 -0.02 -3.31 16 34 H 0.11 -5.70 6.28 -2.39 -0.01 -5.71 16 35 H 0.09 -4.70 8.14 -2.39 -0.02 -4.72 16 36 H 0.14 -8.51 8.14 -2.38 -0.02 -8.53 16 37 H 0.17 -10.40 6.15 -2.39 -0.01 -10.42 16 38 H 0.09 -4.55 8.14 -2.39 -0.02 -4.57 16 39 H 0.13 -6.00 8.14 -2.38 -0.02 -6.02 16 40 H 0.09 -4.47 8.14 -2.39 -0.02 -4.49 16 41 H 0.12 -5.78 8.14 -2.39 -0.02 -5.79 16 42 H 0.16 -9.58 6.15 -2.39 -0.01 -9.59 16 43 H 0.14 -8.30 8.14 -2.39 -0.02 -8.32 16 44 H 0.12 -6.89 6.29 -2.39 -0.02 -6.90 16 45 H 0.10 -5.25 8.14 -2.39 -0.02 -5.27 16 46 H 0.09 -4.23 8.14 -2.39 -0.02 -4.25 16 47 H 0.08 -3.16 8.14 -2.39 -0.02 -3.18 16 48 H 0.18 -4.52 7.74 -2.91 -0.02 -4.54 16 49 H 0.14 -2.66 7.96 -2.39 -0.02 -2.68 16 50 H 0.40 -10.12 8.70 -74.06 -0.64 -10.77 16 51 H -0.29 2.27 7.11 99.48 0.71 2.98 16 52 H -0.30 2.13 7.11 99.48 0.71 2.84 16 Total: 1.00 -79.43 401.42 -0.28 -79.71 By element: Atomic # 1 Polarization: -163.01 SS G_CDS: -1.13 Total: -164.13 kcal Atomic # 6 Polarization: 15.95 SS G_CDS: 4.68 Total: 20.63 kcal Atomic # 7 Polarization: 42.83 SS G_CDS: -2.47 Total: 40.36 kcal Atomic # 8 Polarization: 35.97 SS G_CDS: -3.55 Total: 32.41 kcal Atomic # 14 Polarization: -11.17 SS G_CDS: 2.20 Total: -8.97 kcal Total: -79.43 -0.28 -79.71 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608376_13308374.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.544 kcal (2) G-P(sol) polarization free energy of solvation -79.430 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.115 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.278 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -79.708 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.836 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds