Wall clock time and date at job start Sun Mar 7 2021 09:05:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50699 * 109.47152 * 119.99802 * 2 1 3 5 5 C 1.34174 * 125.43799 * 64.72491 * 4 2 1 6 6 C 1.47024 * 105.95318 * 179.86804 * 5 4 2 7 7 C 1.47375 * 127.19530 * 180.15122 * 6 5 4 8 8 O 1.21619 * 119.99858 * 0.30700 * 7 6 5 9 9 N 1.34768 * 120.00377 * 180.30845 * 7 6 5 10 10 C 1.46500 * 120.00181 * 179.97438 * 9 7 6 11 11 H 1.08997 * 109.47636 * 325.00354 * 10 9 7 12 12 C 1.53003 * 109.47128 * 85.00235 * 10 9 7 13 13 C 1.53002 * 109.47317 * 180.02562 * 12 10 9 14 14 C 1.52999 * 109.47017 * 299.99518 * 13 12 10 15 15 H 1.08997 * 109.47285 * 300.00700 * 14 13 12 16 16 N 1.46896 * 109.47239 * 179.97438 * 14 13 12 17 17 H 1.00899 * 109.47736 * 300.00458 * 16 14 13 18 18 C 1.46931 * 109.47898 * 179.97438 * 16 14 13 19 19 C 1.53074 * 109.37955 * 180.02562 * 18 16 14 20 20 O 1.43031 * 109.25551 * 57.62342 * 19 18 16 21 21 C 1.43024 * 113.65464 * 302.10726 * 20 19 18 22 22 C 1.46935 * 109.47546 * 60.01973 * 16 14 13 23 23 C 1.53003 * 109.46684 * 60.00093 * 14 13 12 24 24 C 1.52999 * 109.47236 * 204.99771 * 10 9 7 25 25 C 1.36419 * 105.61603 * 0.38664 * 6 5 4 26 26 O 1.33655 * 108.39707 * 359.76467 * 25 6 5 27 27 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 28 28 H 1.08997 * 109.47332 * 240.00042 * 2 1 3 29 29 H 1.48499 * 109.99670 * 298.67876 * 3 2 1 30 30 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 31 31 H 1.07998 * 127.02132 * 359.97438 * 5 4 2 32 32 H 0.97006 * 120.00330 * 359.97438 * 9 7 6 33 33 H 1.09003 * 109.47022 * 299.99849 * 12 10 9 34 34 H 1.09000 * 109.47461 * 59.99362 * 12 10 9 35 35 H 1.08998 * 109.46885 * 179.97438 * 13 12 10 36 36 H 1.08994 * 109.46989 * 59.99704 * 13 12 10 37 37 H 1.08999 * 109.49112 * 299.96184 * 18 16 14 38 38 H 1.09004 * 109.48994 * 60.02619 * 18 16 14 39 39 H 1.09009 * 109.49821 * 297.69723 * 19 18 16 40 40 H 1.09000 * 109.54985 * 177.59236 * 19 18 16 41 41 H 1.09001 * 109.50887 * 297.96549 * 21 20 19 42 42 H 1.09003 * 109.54499 * 177.85693 * 21 20 19 43 43 H 1.08998 * 109.49092 * 299.97967 * 22 16 14 44 44 H 1.08997 * 109.48731 * 60.02000 * 22 16 14 45 45 H 1.09003 * 109.47022 * 180.02562 * 23 14 13 46 46 H 1.09002 * 109.47585 * 59.99985 * 23 14 13 47 47 H 1.08999 * 109.47653 * 300.00421 * 24 10 9 48 48 H 1.08998 * 109.46926 * 60.00573 * 24 10 9 49 49 H 1.08000 * 125.80531 * 179.76459 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7506 -2.0110 1.5062 6 6 2.4128 -2.2461 2.7976 7 6 2.5012 -3.5191 3.5349 8 8 1.9948 -4.5246 3.0748 9 7 3.1430 -3.5691 4.7189 10 6 3.2303 -4.8345 5.4520 11 1 2.3142 -5.4056 5.3015 12 6 4.4242 -5.6409 4.9371 13 6 4.5150 -6.9627 5.7022 14 6 4.6981 -6.6768 7.1941 15 1 5.6142 -6.1059 7.3449 16 7 4.7847 -7.9459 7.9288 17 1 3.9364 -8.4740 7.7892 18 6 4.9611 -7.6715 9.3615 19 6 5.0517 -8.9953 10.1248 20 8 6.1345 -9.7689 9.6006 21 6 6.0198 -10.0422 8.2014 22 6 5.9312 -8.7208 7.4348 23 6 3.5041 -5.8704 7.7090 24 6 3.4136 -4.5481 6.9437 25 6 2.9239 -1.0384 3.1735 26 8 2.6261 -0.1417 2.2282 27 1 -0.3934 0.4416 -0.7651 28 1 1.7924 -0.5138 -0.8899 29 1 1.5877 2.4585 -1.2243 30 1 1.5613 2.4680 1.2084 31 1 1.2273 -2.7372 0.9020 32 1 3.5472 -2.7672 5.0857 33 1 4.2937 -5.8450 3.8743 34 1 5.3404 -5.0699 5.0874 35 1 5.3654 -7.5374 5.3351 36 1 3.5988 -7.5335 5.5514 37 1 5.8780 -7.1019 9.5125 38 1 4.1109 -7.0968 9.7291 39 1 4.1193 -9.5477 10.0071 40 1 5.2253 -8.7955 11.1822 41 1 5.1207 -10.6305 8.0179 42 1 6.8943 -10.5998 7.8659 43 1 5.8013 -8.9250 6.3720 44 1 6.8477 -8.1506 7.5862 45 1 3.6347 -5.6663 8.7717 46 1 2.5878 -6.4412 7.5582 47 1 4.3298 -3.9770 7.0942 48 1 2.5630 -3.9736 7.3106 49 1 3.4755 -0.8404 4.0807 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608376_13456056.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:05:51 Heat of formation + Delta-G solvation = 42.851200 kcal Electronic energy + Delta-G solvation = -29787.729447 eV Core-core repulsion = 25609.873912 eV Total energy + Delta-G solvation = -4177.855535 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.185 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -45.59915 -44.48997 -42.18995 -40.97393 -39.30747 -38.73435 -36.28534 -35.43351 -34.76506 -33.70937 -33.09005 -32.15436 -30.11780 -28.18710 -27.43797 -26.35954 -25.81978 -25.42501 -24.72582 -23.17120 -22.98004 -21.84320 -21.08268 -20.42214 -19.94472 -19.87371 -19.45793 -19.19371 -18.94348 -18.46623 -18.28263 -18.10322 -17.91823 -17.51235 -17.22120 -16.86120 -16.64198 -16.50997 -16.31189 -16.18796 -16.14684 -15.80122 -15.70135 -15.23796 -14.97797 -14.89752 -14.86018 -14.75405 -14.61733 -14.47207 -14.44799 -14.17445 -13.98024 -13.48645 -13.44677 -13.19623 -13.04323 -12.70336 -12.08011 -11.67921 -11.39362 -11.32915 -10.56521 -5.61791 -1.63260 -0.62281 0.10569 0.26905 0.31535 0.48133 0.50963 0.62914 0.71300 0.82725 0.93923 1.05037 1.19576 1.27098 1.33888 1.38735 1.46986 1.52587 1.66599 1.76141 1.83348 1.93448 2.03938 2.09130 2.24374 2.29897 2.37865 2.40399 2.43667 2.44584 2.57090 2.61204 2.69781 2.72025 2.76038 2.80212 2.85353 2.92772 3.04527 3.15684 3.29142 3.43433 3.54911 3.63818 3.67836 3.83364 3.83674 3.98873 4.16684 4.46919 5.09435 5.29253 5.63722 6.13213 Molecular weight = 338.18amu Principal moments of inertia in cm(-1) A = 0.039144 B = 0.001901 C = 0.001878 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 715.134888 B =14722.311293 C =14903.270412 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.040 4.040 3 Si 0.699 3.301 4 C -0.002 4.002 5 C -0.123 4.123 6 C -0.245 4.245 7 C 0.596 3.404 8 O -0.527 6.527 9 N -0.730 5.730 10 C 0.143 3.857 11 H 0.097 0.903 12 C -0.129 4.129 13 C -0.138 4.138 14 C 0.024 3.976 15 H 0.140 0.860 16 N -0.384 5.384 17 H 0.422 0.578 18 C -0.048 4.048 19 C 0.036 3.964 20 O -0.357 6.357 21 C 0.036 3.964 22 C -0.048 4.048 23 C -0.137 4.137 24 C -0.126 4.126 25 C 0.037 3.963 26 O -0.162 6.162 27 H 0.392 0.608 28 H 0.100 0.900 29 H -0.250 1.250 30 H -0.251 1.251 31 H 0.163 0.837 32 H 0.402 0.598 33 H 0.092 0.908 34 H 0.078 0.922 35 H 0.092 0.908 36 H 0.091 0.909 37 H 0.139 0.861 38 H 0.144 0.856 39 H 0.081 0.919 40 H 0.142 0.858 41 H 0.081 0.919 42 H 0.142 0.858 43 H 0.144 0.856 44 H 0.139 0.861 45 H 0.095 0.905 46 H 0.092 0.908 47 H 0.083 0.917 48 H 0.094 0.906 49 H 0.213 0.787 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.062 -13.359 15.068 22.511 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.149 4.149 3 Si 0.598 3.402 4 C -0.050 4.050 5 C -0.143 4.143 6 C -0.250 4.250 7 C 0.385 3.615 8 O -0.403 6.403 9 N -0.382 5.382 10 C 0.038 3.962 11 H 0.115 0.885 12 C -0.169 4.169 13 C -0.176 4.176 14 C -0.078 4.078 15 H 0.157 0.843 16 N 0.039 4.961 17 H 0.257 0.743 18 C -0.169 4.169 19 C -0.041 4.041 20 O -0.274 6.274 21 C -0.041 4.041 22 C -0.169 4.169 23 C -0.175 4.175 24 C -0.164 4.164 25 C -0.034 4.034 26 O -0.057 6.057 27 H 0.242 0.758 28 H 0.118 0.882 29 H -0.174 1.174 30 H -0.175 1.175 31 H 0.180 0.820 32 H 0.236 0.764 33 H 0.111 0.889 34 H 0.097 0.903 35 H 0.111 0.889 36 H 0.109 0.891 37 H 0.157 0.843 38 H 0.162 0.838 39 H 0.099 0.901 40 H 0.160 0.840 41 H 0.099 0.901 42 H 0.160 0.840 43 H 0.162 0.838 44 H 0.157 0.843 45 H 0.113 0.887 46 H 0.110 0.890 47 H 0.101 0.899 48 H 0.113 0.887 49 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 10.015 -13.175 15.412 22.614 hybrid contribution -1.408 0.023 -0.474 1.486 sum 8.607 -13.152 14.937 21.684 Atomic orbital electron populations 1.86549 1.16662 1.80502 1.50590 1.23860 0.85164 1.12409 0.93480 0.94586 0.91190 0.73098 0.81368 1.21158 1.00394 0.92007 0.91409 1.22484 1.00899 0.95582 0.95305 1.21361 1.10010 0.94051 0.99577 1.17271 0.77060 0.87294 0.79918 1.90832 1.46270 1.35740 1.67469 1.45773 1.58670 1.11928 1.21856 1.20976 0.99572 0.85783 0.89905 0.88543 1.21940 0.99401 0.93713 1.01804 1.22106 1.05014 1.01033 0.89439 1.23774 1.05682 0.83140 0.95169 0.84254 1.45679 1.17983 1.16831 1.15642 0.74282 1.24711 1.10286 1.04217 0.77717 1.23265 0.92357 0.87572 1.00902 1.88400 1.44804 1.72061 1.22117 1.23257 1.07128 0.92669 0.81029 1.24706 0.90304 0.97167 1.04756 1.22086 0.96191 0.97524 1.01677 1.21782 1.04981 0.95998 0.93638 1.24420 0.99385 0.86642 0.92920 1.83707 1.57141 1.38740 1.26135 0.75844 0.88207 1.17425 1.17487 0.81977 0.76367 0.88893 0.90304 0.88932 0.89050 0.84293 0.83848 0.90090 0.84023 0.90073 0.84001 0.83797 0.84288 0.88710 0.88953 0.89868 0.88717 0.77017 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 3.59 12.86 -35.23 -0.45 3.13 16 2 C -0.04 0.33 2.96 36.01 0.11 0.44 16 3 Si 0.70 -5.88 32.09 -169.99 -5.46 -11.33 16 4 C 0.00 0.01 6.22 -35.74 -0.22 -0.21 16 5 C -0.12 0.84 10.90 -37.45 -0.41 0.44 16 6 C -0.25 2.27 6.31 -103.27 -0.65 1.62 16 7 C 0.60 -6.09 7.78 -12.55 -0.10 -6.19 16 8 O -0.53 3.27 16.65 5.26 0.09 3.36 16 9 N -0.73 11.50 5.07 -54.90 -0.28 11.22 16 10 C 0.14 -2.69 2.45 -67.93 -0.17 -2.86 16 11 H 0.10 -1.60 7.58 -51.93 -0.39 -2.00 16 12 C -0.13 2.64 5.49 -26.73 -0.15 2.50 16 13 C -0.14 3.48 4.89 -26.73 -0.13 3.35 16 14 C 0.02 -0.67 1.62 -67.71 -0.11 -0.78 16 15 H 0.14 -4.04 8.14 -51.93 -0.42 -4.46 16 16 N -0.38 11.63 0.24 -226.53 -0.05 11.58 16 17 H 0.42 -13.47 8.32 -39.29 -0.33 -13.79 16 18 C -0.05 1.39 4.93 -3.77 -0.02 1.37 16 19 C 0.04 -0.93 6.96 37.20 0.26 -0.67 16 20 O -0.36 7.82 10.84 -35.23 -0.38 7.44 16 21 C 0.04 -0.92 6.96 37.17 0.26 -0.67 16 22 C -0.05 1.37 4.93 -3.79 -0.02 1.36 16 23 C -0.14 3.61 4.90 -26.70 -0.13 3.48 16 24 C -0.13 2.83 5.39 -26.70 -0.14 2.68 16 25 C 0.04 -0.43 11.61 30.08 0.35 -0.08 16 26 O -0.16 1.37 8.90 7.63 0.07 1.44 16 27 H 0.39 -4.20 8.74 45.56 0.40 -3.80 16 28 H 0.10 -1.05 7.96 -51.93 -0.41 -1.46 16 29 H -0.25 1.60 7.11 56.52 0.40 2.00 16 30 H -0.25 1.16 7.11 56.52 0.40 1.56 16 31 H 0.16 -1.05 8.06 -52.49 -0.42 -1.48 16 32 H 0.40 -7.37 7.57 -40.82 -0.31 -7.67 16 33 H 0.09 -1.53 8.14 -51.93 -0.42 -1.95 16 34 H 0.08 -1.65 8.14 -51.93 -0.42 -2.07 16 35 H 0.09 -2.42 6.29 -51.93 -0.33 -2.75 16 36 H 0.09 -2.29 8.14 -51.93 -0.42 -2.71 16 37 H 0.14 -4.04 8.14 -51.93 -0.42 -4.46 16 38 H 0.14 -4.37 6.15 -51.93 -0.32 -4.69 16 39 H 0.08 -2.14 8.14 -51.92 -0.42 -2.56 16 40 H 0.14 -3.50 8.14 -51.93 -0.42 -3.92 16 41 H 0.08 -2.13 8.14 -51.93 -0.42 -2.55 16 42 H 0.14 -3.47 8.14 -51.93 -0.42 -3.89 16 43 H 0.14 -4.30 6.15 -51.93 -0.32 -4.62 16 44 H 0.14 -4.00 8.14 -51.93 -0.42 -4.42 16 45 H 0.09 -2.62 6.29 -51.93 -0.33 -2.94 16 46 H 0.09 -2.43 8.14 -51.93 -0.42 -2.85 16 47 H 0.08 -1.93 8.14 -51.93 -0.42 -2.35 16 48 H 0.09 -1.97 8.14 -51.93 -0.42 -2.39 16 49 H 0.21 -3.59 7.47 -52.49 -0.39 -3.98 16 LS Contribution 381.60 15.07 5.75 5.75 Total: 1.00 -38.02 381.60 -9.83 -47.85 By element: Atomic # 1 Polarization: -78.36 SS G_CDS: -7.84 Total: -86.20 kcal Atomic # 6 Polarization: 7.04 SS G_CDS: -1.27 Total: 5.77 kcal Atomic # 7 Polarization: 23.13 SS G_CDS: -0.33 Total: 22.80 kcal Atomic # 8 Polarization: 16.04 SS G_CDS: -0.68 Total: 15.36 kcal Atomic # 14 Polarization: -5.88 SS G_CDS: -5.46 Total: -11.33 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -38.02 -9.83 -47.85 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608376_13456056.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.706 kcal (2) G-P(sol) polarization free energy of solvation -38.021 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.685 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.834 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.855 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.851 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds