Wall clock time and date at job start Sun Mar 7 2021 09:07:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86299 * 109.47076 * 2 1 4 4 C 1.50704 * 109.46758 * 119.99722 * 2 1 3 5 5 C 1.35451 * 125.56354 * 245.02615 * 4 2 1 6 6 C 1.39831 * 107.86609 * 179.97438 * 5 4 2 7 7 C 1.37879 * 107.08350 * 359.97438 * 6 5 4 8 8 C 1.46681 * 126.23129 * 179.97438 * 7 6 5 9 9 O 1.21694 * 119.99885 * 0.03155 * 8 7 6 10 10 N 1.34778 * 119.99697 * 180.02562 * 8 7 6 11 11 C 1.46497 * 119.99664 * 180.02562 * 10 8 7 12 12 H 1.09002 * 109.46915 * 35.00835 * 11 10 8 13 13 C 1.53002 * 109.46729 * 155.00120 * 11 10 8 14 14 C 1.52997 * 109.46978 * 179.97438 * 13 11 10 15 15 C 1.53002 * 109.47415 * 300.00098 * 14 13 11 16 16 H 1.09002 * 109.47070 * 300.00053 * 15 14 13 17 17 N 1.46899 * 109.47394 * 180.02562 * 15 14 13 18 18 H 1.00901 * 109.47797 * 300.00527 * 17 15 14 19 19 C 1.46934 * 109.47879 * 179.97438 * 17 15 14 20 20 C 1.53072 * 109.37599 * 179.97438 * 19 17 15 21 21 O 1.43032 * 109.25539 * 57.62828 * 20 19 17 22 22 C 1.43033 * 113.65344 * 302.09566 * 21 20 19 23 23 C 1.46934 * 109.47835 * 60.01741 * 17 15 14 24 24 C 1.52997 * 109.46817 * 59.99873 * 15 14 13 25 25 C 1.52992 * 109.47482 * 300.00014 * 24 15 14 26 26 N 1.35533 * 125.56118 * 65.25316 * 4 2 1 27 27 H 0.96693 * 114.00133 * 300.00656 * 1 2 3 28 28 H 1.08999 * 109.47254 * 239.99859 * 2 1 3 29 29 H 1.48503 * 109.99746 * 299.99350 * 3 2 1 30 30 H 1.48500 * 110.00277 * 61.31712 * 3 2 1 31 31 H 1.08005 * 126.06716 * 359.97438 * 5 4 2 32 32 H 1.08001 * 126.46302 * 179.97438 * 6 5 4 33 33 H 0.97000 * 119.99923 * 0.02562 * 10 8 7 34 34 H 1.09002 * 109.47097 * 60.00183 * 13 11 10 35 35 H 1.08998 * 109.47844 * 300.00398 * 13 11 10 36 36 H 1.09000 * 109.47140 * 180.02562 * 14 13 11 37 37 H 1.09002 * 109.47497 * 60.00450 * 14 13 11 38 38 H 1.09002 * 109.48404 * 299.95834 * 19 17 15 39 39 H 1.09000 * 109.48965 * 60.01778 * 19 17 15 40 40 H 1.08998 * 109.50180 * 297.69385 * 20 19 17 41 41 H 1.09000 * 109.54557 * 177.58618 * 20 19 17 42 42 H 1.08999 * 109.51006 * 297.97864 * 22 21 20 43 43 H 1.08995 * 109.54642 * 177.86207 * 22 21 20 44 44 H 1.08998 * 109.49126 * 299.97814 * 23 17 15 45 45 H 1.09001 * 109.48979 * 60.02049 * 23 17 15 46 46 H 1.09002 * 109.47153 * 60.00231 * 24 15 14 47 47 H 1.08998 * 109.47533 * 179.97438 * 24 15 14 48 48 H 1.09002 * 109.47103 * 300.00247 * 25 24 15 49 49 H 1.08996 * 109.47747 * 179.97438 * 25 24 15 50 50 H 0.96990 * 125.68239 * 0.06728 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 2.6325 -0.1392 2.2389 6 6 2.9067 -1.1306 3.1861 7 6 2.3522 -2.3028 2.7176 8 6 2.3929 -3.6085 3.3848 9 8 2.9563 -3.7265 4.4570 10 7 1.8063 -4.6773 2.8104 11 6 1.8466 -5.9812 3.4770 12 1 1.7890 -5.8394 4.5562 13 6 0.6618 -6.8293 3.0102 14 6 0.7041 -8.1913 3.7059 15 6 2.0115 -8.9037 3.3535 16 1 2.0687 -9.0451 2.2742 17 7 2.0519 -10.2117 4.0210 18 1 1.9987 -10.0813 5.0201 19 6 3.3071 -10.8961 3.6821 20 6 3.3470 -12.2583 4.3792 21 8 2.2066 -13.0249 3.9822 22 6 0.9586 -12.3883 4.2702 23 6 0.9144 -11.0262 3.5719 24 6 3.1962 -8.0555 3.8203 25 6 3.1540 -6.6936 3.1246 26 7 1.7588 -2.0260 1.5068 27 1 -0.3933 0.4418 0.7649 28 1 1.7924 -0.5138 -0.8900 29 1 1.5616 2.4678 -1.2086 30 1 1.5879 2.4586 1.2242 31 1 2.9274 0.8980 2.3005 32 1 3.4504 -1.0024 4.1104 33 1 1.3575 -4.5832 1.9556 34 1 0.7193 -6.9711 1.9310 35 1 -0.2697 -6.3217 3.2608 36 1 -0.1397 -8.7957 3.3730 37 1 0.6469 -8.0500 4.7852 38 1 3.3640 -11.0380 2.6028 39 1 4.1517 -10.2927 4.0149 40 1 3.3310 -12.1148 5.4596 41 1 4.2574 -12.7865 4.0957 42 1 0.8608 -12.2491 5.3468 43 1 0.1399 -13.0098 3.9077 44 1 -0.0174 -10.5194 3.8230 45 1 0.9720 -11.1677 2.4927 46 1 3.1390 -7.9142 4.8996 47 1 4.1277 -8.5631 3.5697 48 1 3.2112 -6.8350 2.0453 49 1 3.9977 -6.0891 3.4574 50 1 1.2932 -2.6656 0.9457 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608376_6580494.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:07:53 Heat of formation + Delta-G solvation = 37.637525 kcal Electronic energy + Delta-G solvation = -29868.782403 eV Core-core repulsion = 25788.419448 eV Total energy + Delta-G solvation = -4080.362955 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.196 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -43.39859 -42.57216 -40.75295 -39.33454 -37.90213 -37.63291 -35.01439 -33.28825 -32.32709 -31.80099 -31.64873 -30.54052 -28.28614 -26.74197 -26.10289 -24.14748 -23.62148 -23.51617 -22.72132 -21.66847 -21.48691 -21.06893 -19.90042 -18.90381 -18.38220 -18.08817 -17.78497 -17.51778 -16.99812 -16.76061 -16.58161 -16.40041 -16.16904 -16.11363 -15.54103 -15.35573 -15.21971 -15.07634 -14.61279 -14.44197 -14.31877 -14.18258 -14.02582 -13.92663 -13.91691 -13.68744 -13.31276 -12.97200 -12.95112 -12.77721 -12.60722 -12.39644 -12.32842 -11.96282 -11.89564 -11.74587 -11.52946 -11.37380 -11.01233 -10.88960 -10.32107 -10.11716 -9.33398 -4.88907 0.24116 0.62573 1.17408 1.49036 1.63827 1.84545 1.95148 2.17649 2.22251 2.46711 2.54460 2.65059 2.93876 3.12766 3.31003 3.34571 3.37665 3.54251 3.60218 3.63786 3.73596 3.78656 3.86528 3.88349 4.02830 4.09040 4.10041 4.19146 4.20913 4.27564 4.28174 4.31971 4.46370 4.47818 4.52460 4.55944 4.65230 4.65438 4.74643 4.79590 4.87795 4.91779 4.96247 4.99134 5.04976 5.12401 5.17516 5.35810 5.53627 5.73366 5.90025 6.21842 6.34971 6.41227 6.98379 Molecular weight = 337.20amu Principal moments of inertia in cm(-1) A = 0.030159 B = 0.002037 C = 0.001977 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 928.202211 B =13741.928027 C =14157.480831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.053 4.053 3 Si 0.780 3.220 4 C 0.033 3.967 5 C -0.210 4.210 6 C -0.123 4.123 7 C -0.062 4.062 8 C 0.593 3.407 9 O -0.566 6.566 10 N -0.716 5.716 11 C 0.134 3.866 12 H 0.073 0.927 13 C -0.121 4.121 14 C -0.136 4.136 15 C 0.045 3.955 16 H 0.158 0.842 17 N -0.369 5.369 18 H 0.434 0.566 19 C -0.035 4.035 20 C 0.029 3.971 21 O -0.401 6.401 22 C 0.028 3.972 23 C -0.035 4.035 24 C -0.135 4.135 25 C -0.127 4.127 26 N -0.508 5.508 27 H 0.390 0.610 28 H 0.139 0.861 29 H -0.303 1.303 30 H -0.287 1.287 31 H 0.158 0.842 32 H 0.143 0.857 33 H 0.409 0.591 34 H 0.095 0.905 35 H 0.077 0.923 36 H 0.120 0.880 37 H 0.096 0.904 38 H 0.144 0.856 39 H 0.159 0.841 40 H 0.086 0.914 41 H 0.125 0.875 42 H 0.087 0.913 43 H 0.126 0.874 44 H 0.164 0.836 45 H 0.145 0.855 46 H 0.092 0.908 47 H 0.109 0.891 48 H 0.086 0.914 49 H 0.049 0.951 50 H 0.430 0.570 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.954 -23.442 1.758 23.527 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.163 4.163 3 Si 0.685 3.315 4 C -0.086 4.086 5 C -0.234 4.234 6 C -0.150 4.150 7 C -0.176 4.176 8 C 0.381 3.619 9 O -0.445 6.445 10 N -0.367 5.367 11 C 0.030 3.970 12 H 0.092 0.908 13 C -0.159 4.159 14 C -0.173 4.173 15 C -0.057 4.057 16 H 0.175 0.825 17 N 0.052 4.948 18 H 0.272 0.728 19 C -0.157 4.157 20 C -0.048 4.048 21 O -0.320 6.320 22 C -0.049 4.049 23 C -0.157 4.157 24 C -0.173 4.173 25 C -0.166 4.166 26 N -0.106 5.106 27 H 0.240 0.760 28 H 0.157 0.843 29 H -0.231 1.231 30 H -0.213 1.213 31 H 0.175 0.825 32 H 0.161 0.839 33 H 0.245 0.755 34 H 0.114 0.886 35 H 0.096 0.904 36 H 0.138 0.862 37 H 0.114 0.886 38 H 0.162 0.838 39 H 0.176 0.824 40 H 0.105 0.895 41 H 0.143 0.857 42 H 0.105 0.895 43 H 0.144 0.856 44 H 0.182 0.818 45 H 0.163 0.837 46 H 0.110 0.890 47 H 0.127 0.873 48 H 0.105 0.895 49 H 0.068 0.932 50 H 0.270 0.730 Dipole moment (debyes) X Y Z Total from point charges -0.744 -23.424 1.552 23.487 hybrid contribution -1.313 0.477 0.523 1.492 sum -2.057 -22.947 2.075 23.132 Atomic orbital electron populations 1.86580 1.18022 1.80340 1.50578 1.24851 0.83567 1.11235 0.96672 0.93418 0.90448 0.71194 0.76409 1.21113 1.03821 0.84447 0.99186 1.20950 1.06172 1.00836 0.95422 1.21481 1.01639 0.91365 1.00504 1.20411 1.10440 0.95870 0.90920 1.17061 0.78086 0.82794 0.83918 1.90856 1.45780 1.85139 1.22717 1.45835 1.56992 1.08799 1.25118 1.21324 0.96552 0.81239 0.97900 0.90835 1.21723 0.96940 0.94721 1.02546 1.22071 0.95824 0.95778 1.03666 1.23404 0.99025 0.80492 1.02741 0.82464 1.45409 1.15139 1.14249 1.20015 0.72844 1.24561 0.87010 0.96378 1.07777 1.23296 0.91166 0.90132 1.00177 1.88323 1.14709 1.45732 1.83192 1.23332 0.87853 0.92457 1.01264 1.24606 0.91328 0.93417 1.06299 1.22022 0.97985 0.94607 1.02721 1.21815 0.96911 0.95684 1.02222 1.41813 1.42848 1.09196 1.16742 0.76043 0.84331 1.23105 1.21303 0.82474 0.83934 0.75489 0.88641 0.90413 0.86229 0.88570 0.83764 0.82357 0.89543 0.85703 0.89521 0.85571 0.81795 0.83726 0.88968 0.87269 0.89533 0.93242 0.73017 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 9.21 12.88 -148.98 -1.92 7.29 16 2 C -0.05 1.05 3.08 71.24 0.22 1.27 16 3 Si 0.78 -13.42 30.56 68.60 2.10 -11.32 16 4 C 0.03 -0.63 6.46 41.34 0.27 -0.36 16 5 C -0.21 3.31 9.32 22.01 0.21 3.51 16 6 C -0.12 1.63 10.65 22.57 0.24 1.87 16 7 C -0.06 1.07 7.06 40.35 0.28 1.36 16 8 C 0.59 -11.01 7.75 86.45 0.67 -10.34 16 9 O -0.57 5.78 16.55 -4.33 -0.07 5.71 16 10 N -0.72 21.34 5.07 -446.49 -2.26 19.08 16 11 C 0.13 -4.87 2.45 44.99 0.11 -4.76 16 12 H 0.07 -2.29 7.58 -2.39 -0.02 -2.30 16 13 C -0.12 5.46 5.39 30.59 0.16 5.62 16 14 C -0.14 7.37 4.90 30.59 0.15 7.52 16 15 C 0.05 -2.64 1.61 44.92 0.07 -2.57 16 16 H 0.16 -9.59 8.14 -2.39 -0.02 -9.61 16 17 N -0.37 22.92 0.24 -870.40 -0.21 22.71 16 18 H 0.43 -28.39 8.32 -89.69 -0.75 -29.14 16 19 C -0.04 2.07 4.93 86.32 0.43 2.50 16 20 C 0.03 -1.44 6.96 72.01 0.50 -0.94 16 21 O -0.40 16.92 10.84 -148.98 -1.62 15.31 16 22 C 0.03 -1.39 6.97 72.02 0.50 -0.89 16 23 C -0.03 2.08 4.94 86.34 0.43 2.51 16 24 C -0.14 6.91 4.90 30.59 0.15 7.06 16 25 C -0.13 5.05 5.49 30.59 0.17 5.22 16 26 N -0.51 11.18 5.99 -171.92 -1.03 10.15 16 27 H 0.39 -8.14 8.70 -74.06 -0.64 -8.79 16 28 H 0.14 -3.20 7.96 -2.39 -0.02 -3.22 16 29 H -0.30 2.63 7.11 99.48 0.71 3.34 16 30 H -0.29 3.39 7.11 99.48 0.71 4.09 16 31 H 0.16 -2.79 6.19 -2.91 -0.02 -2.81 16 32 H 0.14 -1.72 8.06 -2.91 -0.02 -1.74 16 33 H 0.41 -14.23 7.73 -92.71 -0.72 -14.94 16 34 H 0.10 -4.52 8.14 -2.39 -0.02 -4.54 16 35 H 0.08 -3.18 8.14 -2.39 -0.02 -3.20 16 36 H 0.12 -6.97 6.28 -2.39 -0.01 -6.99 16 37 H 0.10 -5.19 8.14 -2.39 -0.02 -5.21 16 38 H 0.14 -8.46 8.14 -2.39 -0.02 -8.48 16 39 H 0.16 -9.66 6.15 -2.39 -0.01 -9.67 16 40 H 0.09 -4.44 8.14 -2.39 -0.02 -4.46 16 41 H 0.13 -5.83 8.14 -2.39 -0.02 -5.85 16 42 H 0.09 -4.52 8.14 -2.39 -0.02 -4.54 16 43 H 0.13 -6.01 8.14 -2.39 -0.02 -6.03 16 44 H 0.16 -10.41 6.15 -2.39 -0.01 -10.42 16 45 H 0.14 -8.65 8.14 -2.39 -0.02 -8.67 16 46 H 0.09 -4.64 8.14 -2.39 -0.02 -4.66 16 47 H 0.11 -5.86 6.29 -2.39 -0.02 -5.87 16 48 H 0.09 -3.59 8.14 -2.39 -0.02 -3.61 16 49 H 0.05 -1.47 8.14 -2.39 -0.02 -1.49 16 50 H 0.43 -12.23 8.19 -92.72 -0.76 -12.99 16 Total: 1.00 -82.00 382.66 -2.30 -84.30 By element: Atomic # 1 Polarization: -169.96 SS G_CDS: -1.84 Total: -171.81 kcal Atomic # 6 Polarization: 14.03 SS G_CDS: 4.56 Total: 18.58 kcal Atomic # 7 Polarization: 55.44 SS G_CDS: -3.51 Total: 51.93 kcal Atomic # 8 Polarization: 31.92 SS G_CDS: -3.61 Total: 28.31 kcal Atomic # 14 Polarization: -13.42 SS G_CDS: 2.10 Total: -11.32 kcal Total: -82.00 -2.30 -84.30 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608376_6580494.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 121.940 kcal (2) G-P(sol) polarization free energy of solvation -82.003 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.938 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.300 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -84.303 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.638 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds