Wall clock time and date at job start Sun Mar 7 2021 06:23:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42902 * 109.47107 * 2 1 4 4 C 1.35901 * 117.00056 * 275.32217 * 3 2 1 5 5 C 1.38736 * 120.05425 * 5.08403 * 4 3 2 6 6 C 1.38145 * 119.94259 * 179.74001 * 5 4 3 7 7 C 1.38270 * 120.05439 * 0.51489 * 6 5 4 8 8 C 1.50706 * 119.93922 * 179.74183 * 7 6 5 9 9 O 1.42905 * 109.46838 * 120.02173 * 8 7 6 10 10 Si 1.86295 * 109.47275 * 0.02562 * 8 7 6 11 11 C 1.38255 * 120.11067 * 359.76035 * 7 6 5 12 12 C 1.38142 * 120.06236 * 359.97438 * 11 7 6 13 13 C 1.50707 * 109.47230 * 120.00001 * 2 1 3 14 14 O 1.21285 * 119.99669 * 245.00474 * 13 2 1 15 15 N 1.34769 * 120.00170 * 64.99782 * 13 2 1 16 16 C 1.46497 * 120.00124 * 179.97438 * 15 13 2 17 17 H 1.08997 * 112.84872 * 23.80879 * 16 15 13 18 18 C 1.53787 * 113.61362 * 155.00296 * 16 15 13 19 19 C 1.53781 * 87.08160 * 139.98311 * 18 16 15 20 20 H 1.08996 * 113.61314 * 89.19603 * 19 18 16 21 21 C 1.52996 * 113.61454 * 220.02041 * 19 18 16 22 22 N 1.46900 * 109.46878 * 185.00085 * 21 19 18 23 23 H 1.00903 * 109.47221 * 304.99553 * 22 21 19 24 24 C 1.46906 * 109.46925 * 184.99904 * 22 21 19 25 25 C 1.46901 * 109.47290 * 65.00025 * 22 21 19 26 26 C 1.53783 * 113.61645 * 252.50062 * 16 15 13 27 27 H 1.08998 * 109.46959 * 299.99914 * 1 2 3 28 28 H 1.09003 * 109.47117 * 60.00158 * 1 2 3 29 29 H 1.09003 * 109.46520 * 179.97438 * 1 2 3 30 30 H 1.08996 * 109.47361 * 239.99744 * 2 1 3 31 31 H 1.07998 * 120.02970 * 359.97438 * 5 4 3 32 32 H 1.08004 * 119.97075 * 180.27095 * 6 5 4 33 33 H 1.09001 * 109.46652 * 240.01673 * 8 7 6 34 34 H 0.96698 * 113.99702 * 299.99470 * 9 8 7 35 35 H 1.48504 * 109.99721 * 179.97438 * 10 8 7 36 36 H 1.48497 * 110.00153 * 301.31771 * 10 8 7 37 37 H 1.08007 * 119.97079 * 180.02562 * 11 7 6 38 38 H 1.07998 * 120.03573 * 179.97438 * 12 11 7 39 39 H 0.97006 * 119.99729 * 0.02562 * 15 13 2 40 40 H 1.09001 * 113.61419 * 25.43156 * 18 16 15 41 41 H 1.08998 * 113.68624 * 254.54477 * 18 16 15 42 42 H 1.08998 * 109.47341 * 64.99713 * 21 19 18 43 43 H 1.08999 * 109.46847 * 304.99648 * 21 19 18 44 44 H 1.08996 * 109.47098 * 299.99892 * 24 22 21 45 45 H 1.08997 * 109.46903 * 59.99705 * 24 22 21 46 46 H 1.09001 * 109.47141 * 179.97438 * 24 22 21 47 47 H 1.08997 * 109.46707 * 299.99387 * 25 22 21 48 48 H 1.08996 * 109.47237 * 59.99799 * 25 22 21 49 49 H 1.09003 * 109.46850 * 180.02562 * 25 22 21 50 50 H 1.08994 * 113.61496 * 105.47106 * 26 16 15 51 51 H 1.09000 * 113.61427 * 334.56574 * 26 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1061 1.9664 -1.2057 5 6 1.6545 1.3303 -2.3529 6 6 1.7521 1.9640 -3.5765 7 6 2.3091 3.2268 -3.6599 8 6 2.4196 3.9133 -4.9970 9 8 1.6856 5.1390 -4.9651 10 14 1.7222 2.8062 -6.3231 11 6 2.7651 3.8605 -2.5189 12 6 2.6648 3.2334 -1.2921 13 6 2.0324 -0.7104 1.2305 14 8 2.6530 -0.0978 2.0735 15 7 1.7920 -2.0264 1.3943 16 6 2.2808 -2.7171 2.5901 17 1 2.4420 -2.0435 3.4318 18 6 1.4686 -3.9718 2.9521 19 6 2.8081 -4.6429 3.2987 20 1 3.1140 -4.4977 4.3348 21 6 2.8951 -6.1038 2.8527 22 7 4.1552 -6.6877 3.3316 23 1 4.9293 -6.1235 3.0145 24 6 4.2947 -8.0515 2.8036 25 6 4.1487 -6.7294 4.8000 26 6 3.4654 -3.6588 2.3167 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3632 -1.0277 -0.0005 30 1 1.8934 -0.5138 -0.8899 31 1 1.2235 0.3421 -2.2889 32 1 1.3967 1.4710 -4.4693 33 1 3.4674 4.1228 -5.2123 34 1 0.7433 5.0284 -4.7783 35 1 1.8248 3.4721 -7.6464 36 1 2.4562 1.5155 -6.3452 37 1 3.1994 4.8470 -2.5866 38 1 3.0215 3.7286 -0.4011 39 1 1.2958 -2.5163 0.7199 40 1 0.9610 -4.4242 2.1001 41 1 0.8128 -3.8359 3.8121 42 1 2.8618 -6.1541 1.7644 43 1 2.0555 -6.6611 3.2680 44 1 3.4585 -8.6610 3.1461 45 1 4.2994 -8.0205 1.7140 46 1 5.2299 -8.4846 3.1585 47 1 4.0452 -5.7175 5.1917 48 1 3.3125 -7.3390 5.1425 49 1 5.0839 -7.1623 5.1552 50 1 4.4222 -3.2691 2.6640 51 1 3.5038 -4.0257 1.2910 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_10157680.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:23:18 Heat of formation + Delta-G solvation = 85.081709 kcal Electronic energy + Delta-G solvation = -28869.631264 eV Core-core repulsion = 24856.751554 eV Total energy + Delta-G solvation = -4012.879710 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.201 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -44.55221 -42.73382 -41.91334 -40.72899 -39.60970 -37.73944 -36.18628 -34.17091 -32.65281 -32.31467 -32.02073 -31.91769 -28.78732 -28.23814 -27.46881 -26.65735 -25.47695 -24.61893 -23.17021 -22.89106 -22.26754 -21.74254 -20.35300 -20.27255 -19.72912 -19.46687 -18.82334 -18.43733 -18.02436 -17.72393 -17.53460 -17.18992 -16.98182 -16.59969 -16.42128 -16.37697 -16.32728 -16.03972 -15.93909 -15.84314 -15.75021 -15.41468 -15.35855 -15.25300 -15.13973 -14.85568 -14.72758 -14.45816 -14.26763 -14.12988 -14.03567 -13.77142 -13.60158 -13.33932 -12.88703 -12.77146 -12.61229 -12.29324 -11.83834 -11.45042 -10.97289 -10.69103 -9.87316 -5.59694 -1.53023 -0.36973 -0.35107 0.33255 0.38947 0.47234 0.53161 0.66816 0.75048 1.05717 1.22390 1.27943 1.44853 1.49547 1.58160 1.63077 1.68233 1.73778 1.84038 2.00939 2.02288 2.05419 2.11431 2.17276 2.24845 2.31601 2.40239 2.67227 2.83415 2.83751 2.85699 2.92700 2.95995 3.03313 3.12290 3.13616 3.23019 3.25047 3.41414 3.51441 3.60473 3.65837 3.81007 3.93155 4.01836 4.07478 4.09520 4.31137 4.50642 4.58142 4.88830 4.99767 5.13382 5.59056 5.98433 6.06193 Molecular weight = 336.20amu Principal moments of inertia in cm(-1) A = 0.020882 B = 0.001957 C = 0.001878 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1340.547398 B =14302.035283 C =14906.584237 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.067 3.933 3 O -0.285 6.285 4 C 0.130 3.870 5 C -0.208 4.208 6 C -0.076 4.076 7 C -0.152 4.152 8 C -0.065 4.065 9 O -0.539 6.539 10 Si 0.687 3.313 11 C -0.050 4.050 12 C -0.144 4.144 13 C 0.522 3.478 14 O -0.504 6.504 15 N -0.722 5.722 16 C 0.131 3.869 17 H 0.125 0.875 18 C -0.131 4.131 19 C -0.147 4.147 20 H 0.119 0.881 21 C 0.002 3.998 22 N -0.388 5.388 23 H 0.428 0.572 24 C -0.048 4.048 25 C -0.053 4.053 26 C -0.161 4.161 27 H 0.078 0.922 28 H 0.083 0.917 29 H 0.077 0.923 30 H 0.100 0.900 31 H 0.131 0.869 32 H 0.130 0.870 33 H 0.114 0.886 34 H 0.379 0.621 35 H -0.253 1.253 36 H -0.260 1.260 37 H 0.136 0.864 38 H 0.136 0.864 39 H 0.404 0.596 40 H 0.099 0.901 41 H 0.093 0.907 42 H 0.131 0.869 43 H 0.133 0.867 44 H 0.122 0.878 45 H 0.123 0.877 46 H 0.125 0.875 47 H 0.124 0.876 48 H 0.123 0.877 49 H 0.125 0.875 50 H 0.086 0.914 51 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.018 -33.696 15.683 37.289 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.006 3.994 3 O -0.197 6.197 4 C 0.085 3.915 5 C -0.227 4.227 6 C -0.094 4.094 7 C -0.153 4.153 8 C -0.176 4.176 9 O -0.345 6.345 10 Si 0.590 3.410 11 C -0.068 4.068 12 C -0.162 4.162 13 C 0.307 3.693 14 O -0.376 6.376 15 N -0.376 5.376 16 C 0.026 3.974 17 H 0.142 0.858 18 C -0.170 4.170 19 C -0.166 4.166 20 H 0.137 0.863 21 C -0.119 4.119 22 N 0.037 4.963 23 H 0.262 0.738 24 C -0.189 4.189 25 C -0.194 4.194 26 C -0.200 4.200 27 H 0.097 0.903 28 H 0.102 0.898 29 H 0.096 0.904 30 H 0.118 0.882 31 H 0.149 0.851 32 H 0.148 0.852 33 H 0.131 0.869 34 H 0.227 0.773 35 H -0.178 1.178 36 H -0.185 1.185 37 H 0.154 0.846 38 H 0.154 0.846 39 H 0.240 0.760 40 H 0.117 0.883 41 H 0.112 0.888 42 H 0.149 0.851 43 H 0.151 0.849 44 H 0.141 0.859 45 H 0.141 0.859 46 H 0.144 0.856 47 H 0.143 0.857 48 H 0.142 0.858 49 H 0.144 0.856 50 H 0.105 0.895 51 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 4.057 -33.490 15.703 37.210 hybrid contribution 0.445 -0.133 -0.193 0.503 sum 4.502 -33.623 15.510 37.301 Atomic orbital electron populations 1.22372 0.91971 1.03817 1.05440 1.22150 0.96133 0.83775 0.97316 1.86229 1.81076 1.25020 1.27395 1.19039 0.95805 0.92934 0.83695 1.21148 1.07506 1.01608 0.92421 1.20813 0.97305 0.94221 0.97032 1.20312 1.02876 0.95626 0.96485 1.25002 1.00329 0.92487 0.99800 1.86526 1.24851 1.28792 1.94285 0.94856 0.90449 0.77636 0.78090 1.20910 0.95880 0.99461 0.90515 1.20554 1.03104 0.93475 0.99101 1.20266 0.79443 0.81920 0.87650 1.90807 1.38141 1.65513 1.43135 1.45761 1.58944 1.09214 1.23666 1.22325 0.93241 0.92195 0.89684 0.85751 1.23376 0.95064 0.94921 1.03653 1.23018 1.01658 0.89923 1.01964 0.86311 1.24070 0.85552 0.97294 1.04992 1.45035 1.17878 1.16933 1.16444 0.73759 1.24148 1.09363 0.80424 1.05011 1.24205 1.09739 1.09625 0.75879 1.23819 1.00349 0.96417 0.99430 0.90293 0.89812 0.90374 0.88216 0.85105 0.85220 0.86874 0.77322 1.17798 1.18507 0.84573 0.84629 0.76045 0.88251 0.88800 0.85078 0.84934 0.85903 0.85876 0.85648 0.85750 0.85821 0.85643 0.89497 0.88496 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 2.31 9.12 37.16 0.34 2.64 16 2 C 0.07 -0.75 2.64 -27.88 -0.07 -0.83 16 3 O -0.28 1.92 9.34 -39.29 -0.37 1.55 16 4 C 0.13 -0.90 6.60 -39.21 -0.26 -1.16 16 5 C -0.21 1.85 8.24 -39.43 -0.32 1.53 16 6 C -0.08 0.64 8.66 -39.60 -0.34 0.29 16 7 C -0.15 1.06 5.39 -104.60 -0.56 0.50 16 8 C -0.07 0.44 2.82 36.01 0.10 0.54 16 9 O -0.54 3.14 12.77 -35.23 -0.45 2.69 16 10 Si 0.69 -5.25 29.78 -169.99 -5.06 -10.31 16 11 C -0.05 0.31 9.60 -39.61 -0.38 -0.07 16 12 C -0.14 0.87 9.99 -39.43 -0.39 0.48 16 13 C 0.52 -5.86 7.18 -10.99 -0.08 -5.94 16 14 O -0.50 3.02 16.11 -14.31 -0.23 2.79 16 15 N -0.72 12.12 5.32 -53.01 -0.28 11.83 16 16 C 0.13 -2.50 4.24 -67.11 -0.28 -2.78 16 17 H 0.12 -2.00 7.46 -51.93 -0.39 -2.39 16 18 C -0.13 3.04 7.39 -25.92 -0.19 2.85 16 19 C -0.15 3.96 3.58 -89.81 -0.32 3.64 16 20 H 0.12 -3.29 6.10 -51.93 -0.32 -3.61 16 21 C 0.00 -0.08 4.48 -3.83 -0.02 -0.09 16 22 N -0.39 12.83 0.66 -251.26 -0.17 12.66 16 23 H 0.43 -14.63 8.44 -39.29 -0.33 -14.96 16 24 C -0.05 1.54 9.19 60.07 0.55 2.09 16 25 C -0.05 1.67 8.98 60.07 0.54 2.21 16 26 C -0.16 3.75 7.43 -25.91 -0.19 3.56 16 27 H 0.08 -0.86 8.14 -51.93 -0.42 -1.29 16 28 H 0.08 -1.03 6.91 -51.93 -0.36 -1.39 16 29 H 0.08 -1.25 7.93 -51.93 -0.41 -1.66 16 30 H 0.10 -1.38 6.31 -51.93 -0.33 -1.70 16 31 H 0.13 -1.57 5.43 -52.49 -0.29 -1.86 16 32 H 0.13 -1.33 4.87 -52.48 -0.26 -1.59 16 33 H 0.11 -0.70 7.96 -51.93 -0.41 -1.11 16 34 H 0.38 -3.67 8.70 45.56 0.40 -3.28 16 35 H -0.25 0.94 7.11 56.52 0.40 1.34 16 36 H -0.26 1.52 7.11 56.52 0.40 1.92 16 37 H 0.14 -0.90 8.06 -52.48 -0.42 -1.32 16 38 H 0.14 -0.87 8.06 -52.49 -0.42 -1.29 16 39 H 0.40 -7.99 8.51 -40.82 -0.35 -8.34 16 40 H 0.10 -2.39 8.08 -51.93 -0.42 -2.81 16 41 H 0.09 -2.04 8.14 -51.93 -0.42 -2.46 16 42 H 0.13 -4.12 7.79 -51.93 -0.40 -4.53 16 43 H 0.13 -4.15 8.09 -51.93 -0.42 -4.56 16 44 H 0.12 -3.91 8.14 -51.93 -0.42 -4.33 16 45 H 0.12 -3.94 8.11 -51.93 -0.42 -4.37 16 46 H 0.13 -4.00 8.14 -51.93 -0.42 -4.43 16 47 H 0.12 -3.88 6.10 -51.93 -0.32 -4.20 16 48 H 0.12 -3.89 8.11 -51.93 -0.42 -4.32 16 49 H 0.13 -3.97 8.14 -51.93 -0.42 -4.39 16 50 H 0.09 -1.90 8.14 -51.93 -0.42 -2.32 16 51 H 0.10 -2.33 7.90 -51.93 -0.41 -2.74 16 LS Contribution 401.47 15.07 6.05 6.05 Total: 1.00 -40.41 401.47 -10.83 -51.24 By element: Atomic # 1 Polarization: -79.56 SS G_CDS: -8.43 Total: -87.99 kcal Atomic # 6 Polarization: 11.36 SS G_CDS: -1.89 Total: 9.47 kcal Atomic # 7 Polarization: 24.95 SS G_CDS: -0.45 Total: 24.50 kcal Atomic # 8 Polarization: 8.08 SS G_CDS: -1.05 Total: 7.03 kcal Atomic # 14 Polarization: -5.25 SS G_CDS: -5.06 Total: -10.31 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -40.41 -10.83 -51.24 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_10157680.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 136.326 kcal (2) G-P(sol) polarization free energy of solvation -40.413 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 95.913 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.831 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -51.244 kcal (6) G-S(sol) free energy of system = (1) + (5) 85.082 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds