Wall clock time and date at job start Sun Mar 7 2021 06:23:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42902 * 109.47107 * 2 1 4 4 C 1.35901 * 117.00056 * 275.32217 * 3 2 1 5 5 C 1.38736 * 120.05425 * 5.08403 * 4 3 2 6 6 C 1.38145 * 119.94259 * 179.74001 * 5 4 3 7 7 C 1.38270 * 120.05439 * 0.51489 * 6 5 4 8 8 C 1.50706 * 119.93922 * 179.74183 * 7 6 5 9 9 O 1.42905 * 109.46838 * 120.02173 * 8 7 6 10 10 Si 1.86295 * 109.47275 * 0.02562 * 8 7 6 11 11 C 1.38255 * 120.11067 * 359.76035 * 7 6 5 12 12 C 1.38142 * 120.06236 * 359.97438 * 11 7 6 13 13 C 1.50707 * 109.47230 * 120.00001 * 2 1 3 14 14 O 1.21285 * 119.99669 * 245.00474 * 13 2 1 15 15 N 1.34769 * 120.00170 * 64.99782 * 13 2 1 16 16 C 1.46497 * 120.00124 * 179.97438 * 15 13 2 17 17 H 1.08997 * 112.84872 * 23.80879 * 16 15 13 18 18 C 1.53787 * 113.61362 * 155.00296 * 16 15 13 19 19 C 1.53781 * 87.08160 * 139.98311 * 18 16 15 20 20 H 1.08996 * 113.61314 * 89.19603 * 19 18 16 21 21 C 1.52996 * 113.61454 * 220.02041 * 19 18 16 22 22 N 1.46900 * 109.46878 * 185.00085 * 21 19 18 23 23 H 1.00903 * 109.47221 * 304.99553 * 22 21 19 24 24 C 1.46906 * 109.46925 * 184.99904 * 22 21 19 25 25 C 1.46901 * 109.47290 * 65.00025 * 22 21 19 26 26 C 1.53783 * 113.61645 * 252.50062 * 16 15 13 27 27 H 1.08998 * 109.46959 * 299.99914 * 1 2 3 28 28 H 1.09003 * 109.47117 * 60.00158 * 1 2 3 29 29 H 1.09003 * 109.46520 * 179.97438 * 1 2 3 30 30 H 1.08996 * 109.47361 * 239.99744 * 2 1 3 31 31 H 1.07998 * 120.02970 * 359.97438 * 5 4 3 32 32 H 1.08004 * 119.97075 * 180.27095 * 6 5 4 33 33 H 1.09001 * 109.46652 * 240.01673 * 8 7 6 34 34 H 0.96698 * 113.99702 * 299.99470 * 9 8 7 35 35 H 1.48504 * 109.99721 * 179.97438 * 10 8 7 36 36 H 1.48497 * 110.00153 * 301.31771 * 10 8 7 37 37 H 1.08007 * 119.97079 * 180.02562 * 11 7 6 38 38 H 1.07998 * 120.03573 * 179.97438 * 12 11 7 39 39 H 0.97006 * 119.99729 * 0.02562 * 15 13 2 40 40 H 1.09001 * 113.61419 * 25.43156 * 18 16 15 41 41 H 1.08998 * 113.68624 * 254.54477 * 18 16 15 42 42 H 1.08998 * 109.47341 * 64.99713 * 21 19 18 43 43 H 1.08999 * 109.46847 * 304.99648 * 21 19 18 44 44 H 1.08996 * 109.47098 * 299.99892 * 24 22 21 45 45 H 1.08997 * 109.46903 * 59.99705 * 24 22 21 46 46 H 1.09001 * 109.47141 * 179.97438 * 24 22 21 47 47 H 1.08997 * 109.46707 * 299.99387 * 25 22 21 48 48 H 1.08996 * 109.47237 * 59.99799 * 25 22 21 49 49 H 1.09003 * 109.46850 * 180.02562 * 25 22 21 50 50 H 1.08994 * 113.61496 * 105.47106 * 26 16 15 51 51 H 1.09000 * 113.61427 * 334.56574 * 26 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1061 1.9664 -1.2057 5 6 1.6545 1.3303 -2.3529 6 6 1.7521 1.9640 -3.5765 7 6 2.3091 3.2268 -3.6599 8 6 2.4196 3.9133 -4.9970 9 8 1.6856 5.1390 -4.9651 10 14 1.7222 2.8062 -6.3231 11 6 2.7651 3.8605 -2.5189 12 6 2.6648 3.2334 -1.2921 13 6 2.0324 -0.7104 1.2305 14 8 2.6530 -0.0978 2.0735 15 7 1.7920 -2.0264 1.3943 16 6 2.2808 -2.7171 2.5901 17 1 2.4420 -2.0435 3.4318 18 6 1.4686 -3.9718 2.9521 19 6 2.8081 -4.6429 3.2987 20 1 3.1140 -4.4977 4.3348 21 6 2.8951 -6.1038 2.8527 22 7 4.1552 -6.6877 3.3316 23 1 4.9293 -6.1235 3.0145 24 6 4.2947 -8.0515 2.8036 25 6 4.1487 -6.7294 4.8000 26 6 3.4654 -3.6588 2.3167 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3632 -1.0277 -0.0005 30 1 1.8934 -0.5138 -0.8899 31 1 1.2235 0.3421 -2.2889 32 1 1.3967 1.4710 -4.4693 33 1 3.4674 4.1228 -5.2123 34 1 0.7433 5.0284 -4.7783 35 1 1.8248 3.4721 -7.6464 36 1 2.4562 1.5155 -6.3452 37 1 3.1994 4.8470 -2.5866 38 1 3.0215 3.7286 -0.4011 39 1 1.2958 -2.5163 0.7199 40 1 0.9610 -4.4242 2.1001 41 1 0.8128 -3.8359 3.8121 42 1 2.8618 -6.1541 1.7644 43 1 2.0555 -6.6611 3.2680 44 1 3.4585 -8.6610 3.1461 45 1 4.2994 -8.0205 1.7140 46 1 5.2299 -8.4846 3.1585 47 1 4.0452 -5.7175 5.1917 48 1 3.3125 -7.3390 5.1425 49 1 5.0839 -7.1623 5.1552 50 1 4.4222 -3.2691 2.6640 51 1 3.5038 -4.0257 1.2910 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_10157680.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:23:17 Heat of formation + Delta-G solvation = 56.871923 kcal Electronic energy + Delta-G solvation = -28870.854532 eV Core-core repulsion = 24856.751554 eV Total energy + Delta-G solvation = -4014.102978 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.201 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.22858 -41.76408 -40.76955 -39.47969 -38.75389 -37.18174 -35.03524 -33.17889 -31.91325 -31.56507 -30.00007 -29.39418 -26.86362 -26.79480 -26.13656 -25.32159 -24.30994 -23.42678 -22.37749 -21.59596 -20.77674 -19.59181 -19.28574 -18.61774 -18.11564 -17.87179 -17.42165 -16.99620 -16.86720 -16.76210 -16.27646 -16.18054 -15.98278 -15.69478 -15.64148 -15.15262 -14.71365 -14.60097 -14.46335 -14.12390 -13.85826 -13.68172 -13.63535 -13.53339 -13.48273 -13.43457 -13.27563 -13.23855 -13.17791 -12.98561 -12.91717 -12.26182 -12.19619 -12.12566 -12.08207 -11.76504 -11.70205 -11.51873 -10.93674 -10.43777 -10.17712 -10.08862 -9.25931 -5.01754 0.22690 0.25662 1.02338 1.31458 1.34763 1.49599 1.60404 1.98287 2.46289 2.61130 2.91986 2.96747 3.16683 3.38076 3.41388 3.48141 3.53316 3.63414 3.68657 3.70255 3.75804 3.83277 3.84177 3.86620 3.90904 4.16501 4.24927 4.25711 4.32303 4.35319 4.36478 4.46442 4.50591 4.54317 4.61183 4.66906 4.68016 4.70326 4.71314 4.80215 4.86092 4.88210 4.92255 4.94528 5.05173 5.07917 5.14036 5.16002 5.20192 5.46781 5.48069 5.65434 6.22286 6.41657 6.76611 7.07186 Molecular weight = 336.20amu Principal moments of inertia in cm(-1) A = 0.020882 B = 0.001957 C = 0.001878 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1340.547398 B =14302.035283 C =14906.584237 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.057 3.943 3 O -0.316 6.316 4 C 0.123 3.877 5 C -0.198 4.198 6 C -0.074 4.074 7 C -0.160 4.160 8 C -0.077 4.077 9 O -0.561 6.561 10 Si 0.785 3.215 11 C -0.062 4.062 12 C -0.168 4.168 13 C 0.516 3.484 14 O -0.573 6.573 15 N -0.697 5.697 16 C 0.094 3.906 17 H 0.081 0.919 18 C -0.124 4.124 19 C -0.121 4.121 20 H 0.123 0.877 21 C 0.012 3.988 22 N -0.374 5.374 23 H 0.435 0.565 24 C -0.046 4.046 25 C -0.055 4.055 26 C -0.153 4.153 27 H 0.053 0.947 28 H 0.085 0.915 29 H 0.116 0.884 30 H 0.130 0.870 31 H 0.168 0.832 32 H 0.155 0.845 33 H 0.100 0.900 34 H 0.395 0.605 35 H -0.310 1.310 36 H -0.274 1.274 37 H 0.128 0.872 38 H 0.123 0.877 39 H 0.422 0.578 40 H 0.120 0.880 41 H 0.078 0.922 42 H 0.148 0.852 43 H 0.145 0.855 44 H 0.122 0.878 45 H 0.126 0.874 46 H 0.122 0.878 47 H 0.118 0.882 48 H 0.124 0.876 49 H 0.125 0.875 50 H 0.070 0.930 51 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.976 -37.948 14.811 40.784 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C -0.002 4.002 3 O -0.229 6.229 4 C 0.078 3.922 5 C -0.216 4.216 6 C -0.092 4.092 7 C -0.161 4.161 8 C -0.187 4.187 9 O -0.369 6.369 10 Si 0.691 3.309 11 C -0.081 4.081 12 C -0.187 4.187 13 C 0.302 3.698 14 O -0.451 6.451 15 N -0.350 5.350 16 C -0.010 4.010 17 H 0.099 0.901 18 C -0.162 4.162 19 C -0.140 4.140 20 H 0.141 0.859 21 C -0.110 4.110 22 N 0.050 4.950 23 H 0.272 0.728 24 C -0.188 4.188 25 C -0.197 4.197 26 C -0.191 4.191 27 H 0.072 0.928 28 H 0.103 0.897 29 H 0.134 0.866 30 H 0.148 0.852 31 H 0.185 0.815 32 H 0.172 0.828 33 H 0.118 0.882 34 H 0.245 0.755 35 H -0.239 1.239 36 H -0.201 1.201 37 H 0.146 0.854 38 H 0.142 0.858 39 H 0.261 0.739 40 H 0.138 0.862 41 H 0.097 0.903 42 H 0.166 0.834 43 H 0.163 0.837 44 H 0.140 0.860 45 H 0.145 0.855 46 H 0.141 0.859 47 H 0.136 0.864 48 H 0.143 0.857 49 H 0.143 0.857 50 H 0.089 0.911 51 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 2.986 -37.801 14.853 40.724 hybrid contribution 0.771 1.195 0.125 1.428 sum 3.757 -36.606 14.978 39.730 Atomic orbital electron populations 1.22387 0.90592 1.05923 1.04233 1.22551 0.97168 0.82035 0.98419 1.86204 1.81469 1.27461 1.27812 1.19160 0.95742 0.92753 0.84536 1.21485 1.06193 1.02774 0.91178 1.21084 0.96433 0.93491 0.98151 1.20347 1.03480 0.96435 0.95828 1.25238 0.99949 0.92673 1.00812 1.86479 1.26318 1.29667 1.94408 0.93783 0.88680 0.74909 0.73561 1.20892 0.96713 0.99463 0.90995 1.20602 1.04530 0.94666 0.98865 1.20509 0.78833 0.83399 0.87042 1.90773 1.41678 1.67313 1.45368 1.45681 1.57464 1.07408 1.24494 1.22719 0.97533 0.92907 0.87851 0.90072 1.23340 0.96271 0.92833 1.03771 1.22773 0.97818 0.91940 1.01424 0.85875 1.23911 0.86822 0.94266 1.05995 1.44827 1.17454 1.16915 1.15777 0.72829 1.24136 1.09210 0.80266 1.05158 1.24192 1.09830 1.09202 0.76476 1.23763 0.97880 0.95994 1.01500 0.92785 0.89662 0.86575 0.85250 0.81480 0.82773 0.88210 0.75529 1.23859 1.20067 0.85426 0.85849 0.73904 0.86188 0.90305 0.83431 0.83679 0.85979 0.85513 0.85906 0.86400 0.85713 0.85683 0.91132 0.86680 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 4.43 9.12 71.98 0.66 5.09 16 2 C 0.06 -1.23 2.64 29.85 0.08 -1.15 16 3 O -0.32 3.32 9.34 -73.44 -0.69 2.64 16 4 C 0.12 -1.44 6.60 22.51 0.15 -1.29 16 5 C -0.20 3.56 8.24 22.37 0.18 3.75 16 6 C -0.07 1.26 8.66 22.25 0.19 1.45 16 7 C -0.16 1.99 5.39 -19.85 -0.11 1.88 16 8 C -0.08 0.92 2.82 71.24 0.20 1.12 16 9 O -0.56 5.49 12.77 -148.98 -1.90 3.59 16 10 Si 0.78 -11.72 29.78 68.60 2.04 -9.68 16 11 C -0.06 0.58 9.60 22.25 0.21 0.80 16 12 C -0.17 1.42 9.99 22.37 0.22 1.64 16 13 C 0.52 -10.15 7.18 87.66 0.63 -9.52 16 14 O -0.57 4.00 16.11 15.94 0.26 4.26 16 15 N -0.70 22.40 5.32 -440.03 -2.34 20.06 16 16 C 0.09 -3.38 4.24 45.52 0.19 -3.19 16 17 H 0.08 -2.18 7.46 -2.39 -0.02 -2.20 16 18 C -0.12 5.66 7.39 31.12 0.23 5.89 16 19 C -0.12 6.49 3.58 -10.27 -0.04 6.46 16 20 H 0.12 -6.71 6.10 -2.39 -0.01 -6.73 16 21 C 0.01 -0.75 4.48 86.30 0.39 -0.37 16 22 N -0.37 24.89 0.66 -948.85 -0.62 24.26 16 23 H 0.44 -29.93 8.44 -89.69 -0.76 -30.68 16 24 C -0.05 2.99 9.19 127.69 1.17 4.16 16 25 C -0.05 3.46 8.98 127.69 1.15 4.61 16 26 C -0.15 6.96 7.43 31.12 0.23 7.19 16 27 H 0.05 -1.05 8.14 -2.39 -0.02 -1.07 16 28 H 0.08 -2.15 6.91 -2.39 -0.02 -2.16 16 29 H 0.12 -3.90 7.93 -2.39 -0.02 -3.91 16 30 H 0.13 -3.67 6.31 -2.39 -0.02 -3.68 16 31 H 0.17 -4.38 5.43 -2.91 -0.02 -4.39 16 32 H 0.16 -3.44 4.87 -2.91 -0.01 -3.45 16 33 H 0.10 -0.98 7.96 -2.39 -0.02 -1.00 16 34 H 0.39 -7.13 8.70 -74.06 -0.64 -7.78 16 35 H -0.31 1.68 7.11 99.48 0.71 2.39 16 36 H -0.27 3.43 7.11 99.48 0.71 4.14 16 37 H 0.13 -1.14 8.06 -2.91 -0.02 -1.17 16 38 H 0.12 -0.93 8.06 -2.91 -0.02 -0.95 16 39 H 0.42 -16.93 8.51 -92.70 -0.79 -17.72 16 40 H 0.12 -5.96 8.08 -2.39 -0.02 -5.98 16 41 H 0.08 -3.30 8.14 -2.39 -0.02 -3.32 16 42 H 0.15 -9.66 7.79 -2.39 -0.02 -9.68 16 43 H 0.15 -9.35 8.09 -2.39 -0.02 -9.37 16 44 H 0.12 -7.83 8.14 -2.39 -0.02 -7.85 16 45 H 0.13 -8.24 8.11 -2.39 -0.02 -8.26 16 46 H 0.12 -7.82 8.14 -2.39 -0.02 -7.84 16 47 H 0.12 -7.24 6.10 -2.39 -0.01 -7.26 16 48 H 0.12 -7.84 8.11 -2.39 -0.02 -7.86 16 49 H 0.12 -7.82 8.14 -2.39 -0.02 -7.84 16 50 H 0.07 -2.92 8.14 -2.39 -0.02 -2.94 16 51 H 0.11 -5.63 7.90 -2.39 -0.02 -5.65 16 Total: 1.00 -91.87 401.47 1.29 -90.58 By element: Atomic # 1 Polarization: -163.03 SS G_CDS: -1.20 Total: -164.23 kcal Atomic # 6 Polarization: 22.77 SS G_CDS: 5.75 Total: 28.52 kcal Atomic # 7 Polarization: 47.28 SS G_CDS: -2.96 Total: 44.32 kcal Atomic # 8 Polarization: 12.82 SS G_CDS: -2.33 Total: 10.49 kcal Atomic # 14 Polarization: -11.72 SS G_CDS: 2.04 Total: -9.68 kcal Total: -91.87 1.29 -90.58 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_10157680.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 147.451 kcal (2) G-P(sol) polarization free energy of solvation -91.872 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.579 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.293 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -90.579 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.872 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds