Wall clock time and date at job start Sun Mar 7 2021 06:23:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 H 1.00895 * 109.46903 * 2 1 4 4 C 1.46896 * 109.47078 * 120.00704 * 2 1 3 5 5 C 1.46907 * 109.46659 * 240.00288 * 2 1 3 6 6 C 1.52995 * 109.46632 * 175.00157 * 5 2 1 7 7 H 1.09000 * 112.85307 * 43.80806 * 6 5 2 8 8 C 1.53791 * 113.60994 * 174.99997 * 6 5 2 9 9 C 1.53786 * 87.07966 * 139.97886 * 8 6 5 10 10 H 1.08998 * 113.60870 * 89.19954 * 9 8 6 11 11 N 1.46499 * 113.61394 * 220.01815 * 9 8 6 12 12 C 1.34777 * 119.99665 * 205.27970 * 11 9 8 13 13 O 1.21693 * 120.00200 * 359.72115 * 12 11 9 14 14 C 1.46680 * 119.99703 * 179.72441 * 12 11 9 15 15 C 1.37866 * 126.23126 * 179.71115 * 14 12 11 16 16 C 1.39839 * 107.08428 * 179.84713 * 15 14 12 17 17 C 1.50700 * 126.06748 * 180.14062 * 16 15 14 18 18 O 1.42902 * 109.46931 * 300.29977 * 17 16 15 19 19 Si 1.86303 * 109.46917 * 180.30543 * 17 16 15 20 20 C 1.35452 * 107.86271 * 0.41692 * 16 15 14 21 21 N 1.35525 * 108.87395 * 359.74497 * 20 16 15 22 22 C 1.53778 * 87.08287 * 334.56878 * 9 8 6 23 23 H 1.08997 * 109.47260 * 180.02562 * 1 2 3 24 24 H 1.09002 * 109.46593 * 299.99852 * 1 2 3 25 25 H 1.08995 * 109.47315 * 59.99130 * 1 2 3 26 26 H 1.09002 * 109.46955 * 299.99223 * 4 2 1 27 27 H 1.08997 * 109.47759 * 59.99468 * 4 2 1 28 28 H 1.09003 * 109.46822 * 179.97438 * 4 2 1 29 29 H 1.09000 * 109.46946 * 55.00243 * 5 2 1 30 30 H 1.09005 * 109.46939 * 295.00038 * 5 2 1 31 31 H 1.08999 * 113.61698 * 25.43239 * 8 6 5 32 32 H 1.08999 * 113.68992 * 254.53765 * 8 6 5 33 33 H 0.97001 * 119.99790 * 24.99683 * 11 9 8 34 34 H 1.07997 * 126.45946 * 359.96364 * 15 14 12 35 35 H 1.08998 * 109.47432 * 60.30168 * 17 16 15 36 36 H 0.96698 * 114.00751 * 300.00563 * 18 17 16 37 37 H 1.48506 * 109.99756 * 179.97438 * 19 17 16 38 38 H 1.48499 * 110.00140 * 301.31504 * 19 17 16 39 39 H 1.08004 * 125.55997 * 179.69986 * 20 16 15 40 40 H 0.96998 * 125.68287 * 180.02562 * 21 20 16 41 41 H 1.08997 * 113.61721 * 139.97826 * 22 9 8 42 42 H 1.09004 * 113.61436 * 270.88721 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9587 -0.6926 1.1993 5 6 1.9586 -0.6925 -1.1996 6 6 3.4834 -0.5846 -1.2640 7 1 3.9615 -0.7640 -0.3010 8 6 4.1090 -1.3821 -2.4205 9 6 5.0666 -0.1949 -2.6171 10 1 5.9791 -0.2675 -2.0253 11 7 5.3243 0.1245 -4.0234 12 6 6.4669 0.7472 -4.3745 13 8 7.2822 1.0486 -3.5227 14 6 6.7277 1.0616 -5.7832 15 6 7.8445 1.6969 -6.2831 16 6 7.6802 1.7870 -7.6689 17 6 8.6536 2.4046 -8.6395 18 8 8.8551 3.7786 -8.3026 19 14 7.9687 2.2830 -10.3678 20 6 6.4880 1.2261 -7.9832 21 7 5.8992 0.7816 -6.8463 22 6 3.9817 0.6852 -1.9743 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3632 0.5138 0.8900 25 1 -0.3633 0.5139 -0.8898 26 1 1.5954 -0.1788 2.0894 27 1 1.5953 -1.7202 1.1993 28 1 3.0487 -0.6930 1.1991 29 1 1.5240 -0.2329 -2.0872 30 1 1.6702 -1.7428 -1.1559 31 1 3.4310 -1.5397 -3.2593 32 1 4.6079 -2.2973 -2.1018 33 1 4.6745 -0.1158 -4.7023 34 1 8.6883 2.0555 -5.7123 35 1 9.6045 1.8744 -8.5874 36 1 8.0491 4.3123 -8.3283 37 1 8.9191 2.8892 -11.3346 38 1 7.7247 0.8608 -10.7186 39 1 6.0738 1.1468 -8.9775 40 1 5.0378 0.3393 -6.7909 41 1 4.3775 1.4392 -1.2939 42 1 3.2687 1.0928 -2.6910 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_10543058.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:23:23 Heat of formation + Delta-G solvation = 137.169854 kcal Electronic energy + Delta-G solvation = -21868.258224 eV Core-core repulsion = 18550.194885 eV Total energy + Delta-G solvation = -3318.063339 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.165 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -44.55370 -43.34219 -42.02328 -40.31217 -38.28652 -36.06053 -33.39343 -32.44839 -31.97443 -31.39499 -28.78808 -28.23662 -27.33955 -26.12398 -24.42157 -22.87834 -22.10984 -21.80972 -21.55072 -20.86245 -20.22162 -19.72437 -18.52345 -18.40070 -17.93725 -17.68971 -17.44422 -16.87763 -16.50834 -16.47749 -16.31322 -16.06982 -15.90589 -15.83184 -15.75754 -15.48734 -15.36570 -15.24327 -15.08160 -14.74526 -14.55564 -14.26152 -14.07479 -13.61298 -13.32647 -12.85569 -12.58407 -12.16372 -11.45087 -11.06104 -10.69702 -10.13422 -5.64458 -1.53263 -0.50327 0.39792 0.46647 0.65117 0.66923 0.76644 0.84882 1.02462 1.13475 1.21902 1.30572 1.40666 1.46130 1.55854 1.62663 1.66994 1.73522 1.83677 2.02782 2.07960 2.12184 2.16945 2.24382 2.31736 2.72384 2.82931 2.90487 2.95040 2.96688 3.12144 3.14882 3.25402 3.26036 3.51111 3.63283 4.00963 4.07780 4.12327 4.27217 4.75801 4.97437 5.22176 5.44020 6.05867 6.08492 Molecular weight = 281.17amu Principal moments of inertia in cm(-1) A = 0.039048 B = 0.002963 C = 0.002888 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 716.887887 B = 9448.158384 C = 9692.142187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.387 5.387 3 H 0.428 0.572 4 C -0.053 4.053 5 C 0.003 3.997 6 C -0.147 4.147 7 H 0.119 0.881 8 C -0.133 4.133 9 C 0.132 3.868 10 H 0.126 0.874 11 N -0.728 5.728 12 C 0.596 3.404 13 O -0.518 6.518 14 C -0.071 4.071 15 C -0.066 4.066 16 C -0.208 4.208 17 C -0.035 4.035 18 O -0.540 6.540 19 Si 0.686 3.314 20 C 0.042 3.958 21 N -0.538 5.538 22 C -0.160 4.160 23 H 0.122 0.878 24 H 0.125 0.875 25 H 0.123 0.877 26 H 0.125 0.875 27 H 0.123 0.877 28 H 0.124 0.876 29 H 0.131 0.869 30 H 0.132 0.868 31 H 0.097 0.903 32 H 0.093 0.907 33 H 0.396 0.604 34 H 0.152 0.848 35 H 0.113 0.887 36 H 0.377 0.623 37 H -0.253 1.253 38 H -0.257 1.257 39 H 0.178 0.822 40 H 0.416 0.584 41 H 0.087 0.913 42 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -25.436 -6.112 18.899 32.273 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 N 0.037 4.963 3 H 0.263 0.737 4 C -0.195 4.195 5 C -0.119 4.119 6 C -0.165 4.165 7 H 0.137 0.863 8 C -0.172 4.172 9 C 0.026 3.974 10 H 0.144 0.856 11 N -0.380 5.380 12 C 0.385 3.615 13 O -0.392 6.392 14 C -0.183 4.183 15 C -0.093 4.093 16 C -0.215 4.215 17 C -0.147 4.147 18 O -0.345 6.345 19 Si 0.588 3.412 20 C -0.095 4.095 21 N -0.134 5.134 22 C -0.199 4.199 23 H 0.141 0.859 24 H 0.144 0.856 25 H 0.141 0.859 26 H 0.144 0.856 27 H 0.142 0.858 28 H 0.143 0.857 29 H 0.149 0.851 30 H 0.150 0.850 31 H 0.115 0.885 32 H 0.112 0.888 33 H 0.231 0.769 34 H 0.170 0.830 35 H 0.130 0.870 36 H 0.224 0.776 37 H -0.178 1.178 38 H -0.182 1.182 39 H 0.195 0.805 40 H 0.253 0.747 41 H 0.106 0.894 42 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -24.325 -6.750 18.838 31.498 hybrid contribution -0.356 -0.384 0.090 0.531 sum -24.681 -7.134 18.928 31.911 Atomic orbital electron populations 1.24147 0.75517 1.09652 1.09635 1.45029 1.16269 1.19087 1.15875 0.73737 1.24206 1.06048 1.02477 0.86729 1.24066 0.98008 1.02485 0.87321 1.23022 0.90757 1.00890 1.01880 0.86272 1.23382 0.98218 0.98758 0.96797 1.22315 0.98216 0.93782 0.83073 0.85632 1.45771 1.21642 1.62050 1.08527 1.17094 0.81021 0.76912 0.86494 1.90907 1.45669 1.52482 1.50192 1.20235 0.96334 1.14693 0.87025 1.21297 0.96800 0.97584 0.93628 1.19987 0.97408 1.08717 0.95351 1.24395 1.00439 0.84055 1.05776 1.86528 1.37088 1.18195 1.92685 0.95255 0.88058 0.82708 0.75219 1.21967 0.94870 1.01718 0.90923 1.41858 1.18271 1.47049 1.06234 1.23808 0.99644 0.96258 1.00193 0.85925 0.85637 0.85876 0.85624 0.85846 0.85730 0.85131 0.84980 0.88466 0.88828 0.76946 0.83035 0.86952 0.77558 1.17783 1.18207 0.80472 0.74688 0.89411 0.88610 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.54 9.19 60.07 0.55 2.09 16 2 N -0.39 12.81 0.66 -251.26 -0.17 12.65 16 3 H 0.43 -14.64 8.44 -39.29 -0.33 -14.97 16 4 C -0.05 1.68 8.98 60.06 0.54 2.22 16 5 C 0.00 -0.09 4.48 -3.82 -0.02 -0.10 16 6 C -0.15 3.94 3.58 -89.80 -0.32 3.62 16 7 H 0.12 -3.29 6.10 -51.93 -0.32 -3.61 16 8 C -0.13 3.03 7.39 -25.91 -0.19 2.84 16 9 C 0.13 -2.46 4.24 -67.12 -0.28 -2.75 16 10 H 0.13 -1.98 7.46 -51.93 -0.39 -2.37 16 11 N -0.73 11.74 5.35 -54.32 -0.29 11.45 16 12 C 0.60 -6.19 7.79 -12.85 -0.10 -6.29 16 13 O -0.52 3.06 16.48 5.20 0.09 3.14 16 14 C -0.07 0.71 7.06 -81.98 -0.58 0.13 16 15 C -0.07 0.49 10.59 -39.12 -0.41 0.07 16 16 C -0.21 1.80 5.44 -105.02 -0.57 1.23 16 17 C -0.03 0.27 3.02 36.01 0.11 0.38 16 18 O -0.54 3.59 12.88 -35.23 -0.45 3.14 16 19 Si 0.69 -6.13 30.59 -169.99 -5.20 -11.32 16 20 C 0.04 -0.48 10.45 -16.92 -0.18 -0.66 16 21 N -0.54 7.05 5.99 -9.39 -0.06 7.00 16 22 C -0.16 3.70 7.43 -25.92 -0.19 3.51 16 23 H 0.12 -3.90 8.14 -51.93 -0.42 -4.32 16 24 H 0.13 -4.01 8.14 -51.93 -0.42 -4.43 16 25 H 0.12 -3.95 8.11 -51.93 -0.42 -4.37 16 26 H 0.13 -3.97 8.14 -51.93 -0.42 -4.40 16 27 H 0.12 -3.88 8.11 -51.93 -0.42 -4.30 16 28 H 0.12 -3.88 6.10 -51.93 -0.32 -4.20 16 29 H 0.13 -4.10 7.79 -51.93 -0.40 -4.50 16 30 H 0.13 -4.11 8.09 -51.93 -0.42 -4.53 16 31 H 0.10 -2.31 8.08 -51.93 -0.42 -2.73 16 32 H 0.09 -2.00 8.14 -51.93 -0.42 -2.42 16 33 H 0.40 -7.54 7.86 -40.82 -0.32 -7.86 16 34 H 0.15 -0.90 8.06 -52.49 -0.42 -1.33 16 35 H 0.11 -0.75 7.96 -51.93 -0.41 -1.17 16 36 H 0.38 -4.07 8.70 45.56 0.40 -3.67 16 37 H -0.25 1.14 7.11 56.52 0.40 1.54 16 38 H -0.26 1.80 7.11 56.52 0.40 2.21 16 39 H 0.18 -2.49 6.19 -52.48 -0.32 -2.82 16 40 H 0.42 -7.13 8.19 -40.82 -0.33 -7.47 16 41 H 0.09 -1.91 8.14 -51.93 -0.42 -2.34 16 42 H 0.10 -2.28 7.90 -51.93 -0.41 -2.69 16 LS Contribution 339.62 15.07 5.12 5.12 Total: 1.00 -40.11 339.62 -9.19 -49.30 By element: Atomic # 1 Polarization: -80.17 SS G_CDS: -6.58 Total: -86.75 kcal Atomic # 6 Polarization: 7.93 SS G_CDS: -1.65 Total: 6.28 kcal Atomic # 7 Polarization: 31.60 SS G_CDS: -0.51 Total: 31.09 kcal Atomic # 8 Polarization: 6.65 SS G_CDS: -0.37 Total: 6.28 kcal Atomic # 14 Polarization: -6.13 SS G_CDS: -5.20 Total: -11.32 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -40.11 -9.19 -49.30 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_10543058.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 186.469 kcal (2) G-P(sol) polarization free energy of solvation -40.111 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 146.358 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.189 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -49.299 kcal (6) G-S(sol) free energy of system = (1) + (5) 137.170 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds