Wall clock time and date at job start Sun Mar 7 2021 06:23:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.35527 * 125.67955 * 2 1 4 4 C 1.35455 * 108.86883 * 180.02562 * 3 2 1 5 5 C 1.50701 * 126.06385 * 179.97438 * 4 3 2 6 6 O 1.42904 * 109.47102 * 120.02570 * 5 4 3 7 7 Si 1.86299 * 109.47403 * 0.02562 * 5 4 3 8 8 C 1.39833 * 107.86577 * 359.73979 * 4 3 2 9 9 C 1.37650 * 125.67457 * 180.02562 * 2 1 3 10 10 C 1.46685 * 126.23405 * 359.96993 * 9 2 1 11 11 O 1.21693 * 119.99609 * 5.30582 * 10 9 2 12 12 N 1.34778 * 119.99932 * 185.29608 * 10 9 2 13 13 C 1.46502 * 119.99652 * 175.00029 * 12 10 9 14 14 H 1.09003 * 112.84905 * 336.47650 * 13 12 10 15 15 C 1.53782 * 113.60967 * 107.78100 * 13 12 10 16 16 C 1.53787 * 87.07999 * 139.98172 * 15 13 12 17 17 H 1.08993 * 113.69399 * 89.12159 * 16 15 13 18 18 C 1.52996 * 113.61541 * 220.02215 * 16 15 13 19 19 N 1.46907 * 109.46686 * 272.49551 * 18 16 15 20 20 H 1.00897 * 109.46918 * 304.99504 * 19 18 16 21 21 C 1.46897 * 109.47301 * 65.00069 * 19 18 16 22 22 C 1.46902 * 109.46711 * 184.99819 * 19 18 16 23 23 C 1.53782 * 113.61142 * 205.27817 * 13 12 10 24 24 H 1.08996 * 109.47192 * 274.48224 * 1 2 3 25 25 H 1.09003 * 109.46727 * 34.47937 * 1 2 3 26 26 H 1.08995 * 109.47212 * 154.47735 * 1 2 3 27 27 H 1.08000 * 125.56886 * 359.97438 * 3 2 1 28 28 H 1.08994 * 109.47423 * 240.01997 * 5 4 3 29 29 H 0.96708 * 113.99983 * 299.99870 * 6 5 4 30 30 H 1.48496 * 109.99929 * 58.68134 * 7 5 4 31 31 H 1.48506 * 110.00038 * 179.97438 * 7 5 4 32 32 H 1.07999 * 126.45473 * 180.29791 * 8 4 3 33 33 H 0.96991 * 120.00042 * 355.28513 * 12 10 9 34 34 H 1.08993 * 113.61298 * 254.52511 * 15 13 12 35 35 H 1.08997 * 113.61706 * 25.43117 * 15 13 12 36 36 H 1.08998 * 109.47104 * 32.48918 * 18 16 15 37 37 H 1.08997 * 109.46999 * 152.49488 * 18 16 15 38 38 H 1.08995 * 109.46893 * 299.99891 * 21 19 18 39 39 H 1.08996 * 109.47141 * 59.99985 * 21 19 18 40 40 H 1.08996 * 109.47127 * 179.97438 * 21 19 18 41 41 H 1.09005 * 109.46882 * 60.00337 * 22 19 18 42 42 H 1.09007 * 109.46804 * 179.97438 * 22 19 18 43 43 H 1.08996 * 109.47510 * 299.99880 * 22 19 18 44 44 H 1.08998 * 113.61608 * 334.56602 * 23 13 12 45 45 H 1.08996 * 113.61295 * 105.39016 * 23 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5522 0.7091 -0.0006 5 6 4.7537 1.6187 -0.0013 6 8 5.5410 1.3689 1.1648 7 14 4.1888 3.3940 -0.0006 8 6 3.5779 -0.6890 0.0051 9 6 2.2678 -1.1182 -0.0005 10 6 1.8123 -2.5125 -0.0005 11 8 0.6258 -2.7649 -0.0975 12 7 2.7079 -3.5140 0.1067 13 6 2.2468 -4.9002 0.2170 14 1 1.2307 -4.9788 0.6037 15 6 2.4912 -5.7334 -1.0522 16 6 2.8787 -6.8941 -0.1206 17 1 2.0361 -7.5198 0.1734 18 6 4.0763 -7.7058 -0.6183 19 7 3.6075 -8.7697 -1.5164 20 1 2.9123 -9.3272 -1.0431 21 6 3.0173 -8.1696 -2.7203 22 6 4.7410 -9.6220 -1.8994 23 6 3.2486 -5.8281 0.9243 24 1 -0.3633 0.0803 1.0245 25 1 -0.3633 0.8472 -0.5818 26 1 -0.3633 -0.9273 -0.4428 27 1 1.9083 2.1236 -0.0004 28 1 5.3529 1.4285 -0.8917 29 1 5.0706 1.5183 1.9965 30 1 3.3446 3.6578 1.1922 31 1 5.3646 4.3011 -0.0007 32 1 4.4583 -1.3145 0.0107 33 1 3.6574 -3.3166 0.1150 34 1 1.5874 -5.9218 -1.6315 35 1 3.3176 -5.3683 -1.6618 36 1 4.7605 -7.0506 -1.1575 37 1 4.5930 -8.1499 0.2324 38 1 2.1763 -7.5372 -2.4361 39 1 3.7683 -7.5674 -3.2316 40 1 2.6699 -8.9590 -3.3868 41 1 5.1789 -10.0673 -1.0059 42 1 4.3931 -10.4117 -2.5653 43 1 5.4920 -9.0198 -2.4106 44 1 4.2821 -5.4888 0.8550 45 1 2.9569 -6.0917 1.9409 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_10803934.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:23:26 Heat of formation + Delta-G solvation = 114.938595 kcal Electronic energy + Delta-G solvation = -24151.466571 eV Core-core repulsion = 20676.901593 eV Total energy + Delta-G solvation = -3474.564978 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.181 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.61777 -42.17232 -40.53541 -38.93461 -37.85075 -35.02325 -33.77595 -31.20738 -29.87528 -29.48281 -28.35684 -26.70970 -26.07927 -25.63455 -24.49032 -22.88022 -21.35788 -21.16309 -20.32096 -19.07942 -18.85693 -18.05240 -17.81572 -17.41207 -16.92273 -16.75007 -16.60067 -16.07664 -15.88055 -15.59988 -15.47152 -15.07468 -14.51786 -14.47605 -14.05950 -13.94567 -13.59267 -13.55985 -13.49543 -13.40189 -13.30391 -13.23385 -13.20636 -13.06883 -12.83991 -12.50651 -12.30882 -11.85394 -11.79111 -11.50241 -11.16844 -10.53650 -10.17697 -9.72982 -9.29654 -4.91610 0.35962 1.04052 1.33399 1.53546 1.56791 1.63355 2.00784 2.23334 2.30589 2.90053 2.97305 3.21677 3.34830 3.46930 3.50062 3.65905 3.73084 3.78990 3.82336 3.98157 4.00377 4.15690 4.18569 4.22036 4.30498 4.34290 4.37900 4.40555 4.47620 4.65494 4.68985 4.69095 4.71480 4.74684 4.75624 4.77984 4.84833 4.88820 4.95204 5.06057 5.13599 5.19770 5.48436 5.65029 5.88228 6.09654 6.41350 6.55872 7.08203 Molecular weight = 295.18amu Principal moments of inertia in cm(-1) A = 0.022404 B = 0.003244 C = 0.002989 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1249.498418 B = 8629.389060 C = 9364.283126 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.415 5.415 3 C 0.027 3.973 4 C -0.215 4.215 5 C -0.034 4.034 6 O -0.549 6.549 7 Si 0.751 3.249 8 C -0.107 4.107 9 C -0.081 4.081 10 C 0.588 3.412 11 O -0.584 6.584 12 N -0.697 5.697 13 C 0.098 3.902 14 H 0.088 0.912 15 C -0.151 4.151 16 C -0.115 4.115 17 H 0.128 0.872 18 C 0.012 3.988 19 N -0.369 5.369 20 H 0.438 0.562 21 C -0.058 4.058 22 C -0.046 4.046 23 C -0.129 4.129 24 H 0.078 0.922 25 H 0.107 0.893 26 H 0.094 0.906 27 H 0.190 0.810 28 H 0.125 0.875 29 H 0.384 0.616 30 H -0.287 1.287 31 H -0.312 1.312 32 H 0.165 0.835 33 H 0.416 0.584 34 H 0.079 0.921 35 H 0.110 0.890 36 H 0.139 0.861 37 H 0.149 0.851 38 H 0.115 0.885 39 H 0.121 0.879 40 H 0.126 0.874 41 H 0.127 0.873 42 H 0.124 0.876 43 H 0.119 0.881 44 H 0.112 0.888 45 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.109 -29.409 -7.578 30.646 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.086 5.086 3 C -0.110 4.110 4 C -0.221 4.221 5 C -0.144 4.144 6 O -0.357 6.357 7 Si 0.658 3.342 8 C -0.134 4.134 9 C -0.193 4.193 10 C 0.377 3.623 11 O -0.466 6.466 12 N -0.347 5.347 13 C -0.006 4.006 14 H 0.106 0.894 15 C -0.189 4.189 16 C -0.134 4.134 17 H 0.146 0.854 18 C -0.110 4.110 19 N 0.054 4.946 20 H 0.276 0.724 21 C -0.200 4.200 22 C -0.188 4.188 23 C -0.168 4.168 24 H 0.096 0.904 25 H 0.126 0.874 26 H 0.113 0.887 27 H 0.207 0.793 28 H 0.143 0.857 29 H 0.233 0.767 30 H -0.213 1.213 31 H -0.241 1.241 32 H 0.183 0.817 33 H 0.254 0.746 34 H 0.098 0.902 35 H 0.128 0.872 36 H 0.157 0.843 37 H 0.167 0.833 38 H 0.133 0.867 39 H 0.140 0.860 40 H 0.145 0.855 41 H 0.145 0.855 42 H 0.142 0.858 43 H 0.137 0.863 44 H 0.130 0.870 45 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 3.497 -28.892 -7.788 30.127 hybrid contribution 0.006 0.221 1.503 1.519 sum 3.502 -28.671 -6.284 29.560 Atomic orbital electron populations 1.22464 0.75103 1.06323 1.04406 1.44038 1.07533 1.05058 1.52013 1.22281 0.90225 0.92513 1.05935 1.19798 0.93663 0.95199 1.13473 1.24278 0.92542 1.06964 0.90666 1.86554 1.42258 1.90152 1.16728 0.94526 0.79561 0.72962 0.87124 1.21391 0.94391 0.94665 1.02912 1.20266 0.90804 0.87974 1.20302 1.17154 0.85460 0.84228 0.75413 1.90780 1.17984 1.85259 1.52546 1.45545 1.09825 1.05791 1.73583 1.22758 0.99738 0.78531 0.99574 0.89403 1.23852 1.03584 0.95056 0.96450 1.22697 0.98693 0.95255 0.96797 0.85404 1.23890 0.98540 0.91174 0.97411 1.44830 1.17794 1.16114 1.15853 0.72447 1.24275 1.03969 1.04352 0.87397 1.24128 0.89636 0.97561 1.07471 1.23349 1.00382 0.93840 0.99179 0.90364 0.87409 0.88732 0.79283 0.85748 0.76727 1.21330 1.24094 0.81705 0.74587 0.90248 0.87209 0.84329 0.83277 0.86656 0.86018 0.85522 0.85481 0.85773 0.86262 0.86972 0.90275 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.98 10.76 127.77 1.38 0.39 16 2 N -0.41 6.24 3.16 -534.31 -1.69 4.55 16 3 C 0.03 -0.46 9.94 83.48 0.83 0.37 16 4 C -0.21 3.61 5.44 -20.12 -0.11 3.50 16 5 C -0.03 0.56 3.02 71.24 0.22 0.77 16 6 O -0.55 7.25 12.88 -148.98 -1.92 5.33 16 7 Si 0.75 -11.59 30.59 68.60 2.10 -9.50 16 8 C -0.11 2.00 10.29 22.57 0.23 2.23 16 9 C -0.08 1.30 6.89 40.35 0.28 1.58 16 10 C 0.59 -10.32 7.77 86.45 0.67 -9.64 16 11 O -0.58 6.09 14.20 -4.33 -0.06 6.03 16 12 N -0.70 19.70 5.34 -443.98 -2.37 17.33 16 13 C 0.10 -3.38 4.21 45.52 0.19 -3.19 16 14 H 0.09 -2.39 7.52 -2.39 -0.02 -2.41 16 15 C -0.15 6.75 5.69 31.12 0.18 6.93 16 16 C -0.12 6.09 3.31 -10.26 -0.03 6.05 16 17 H 0.13 -6.97 8.09 -2.39 -0.02 -6.99 16 18 C 0.01 -0.73 4.57 86.30 0.39 -0.34 16 19 N -0.37 24.33 0.66 -948.86 -0.62 23.71 16 20 H 0.44 -30.41 8.40 -89.70 -0.75 -31.17 16 21 C -0.06 3.54 8.57 127.69 1.09 4.64 16 22 C -0.05 2.95 9.19 127.69 1.17 4.13 16 23 C -0.13 5.60 7.39 31.12 0.23 5.83 16 24 H 0.08 -1.35 8.14 -2.39 -0.02 -1.37 16 25 H 0.11 -2.31 8.14 -2.39 -0.02 -2.33 16 26 H 0.09 -1.30 5.98 -2.39 -0.01 -1.31 16 27 H 0.19 -4.01 6.19 -2.91 -0.02 -4.03 16 28 H 0.12 -2.29 7.96 -2.39 -0.02 -2.31 16 29 H 0.38 -6.81 8.70 -74.05 -0.64 -7.45 16 30 H -0.29 3.16 7.11 99.48 0.71 3.87 16 31 H -0.31 1.83 7.11 99.48 0.71 2.54 16 32 H 0.17 -4.01 7.45 -2.91 -0.02 -4.03 16 33 H 0.42 -13.79 7.63 -92.71 -0.71 -14.49 16 34 H 0.08 -3.37 7.18 -2.39 -0.02 -3.39 16 35 H 0.11 -5.14 7.90 -2.39 -0.02 -5.16 16 36 H 0.14 -8.64 7.79 -2.39 -0.02 -8.66 16 37 H 0.15 -9.49 8.09 -2.39 -0.02 -9.51 16 38 H 0.12 -6.76 5.13 -2.39 -0.01 -6.77 16 39 H 0.12 -7.41 8.11 -2.39 -0.02 -7.43 16 40 H 0.13 -7.79 8.14 -2.39 -0.02 -7.81 16 41 H 0.13 -8.13 8.11 -2.38 -0.02 -8.15 16 42 H 0.12 -7.83 8.14 -2.38 -0.02 -7.85 16 43 H 0.12 -7.49 8.14 -2.39 -0.02 -7.50 16 44 H 0.11 -5.13 8.08 -2.39 -0.02 -5.15 16 45 H 0.08 -3.15 8.14 -2.39 -0.02 -3.17 16 Total: 1.00 -82.43 355.24 1.09 -81.33 By element: Atomic # 1 Polarization: -150.97 SS G_CDS: -1.06 Total: -152.03 kcal Atomic # 6 Polarization: 16.53 SS G_CDS: 6.72 Total: 23.25 kcal Atomic # 7 Polarization: 50.27 SS G_CDS: -4.68 Total: 45.59 kcal Atomic # 8 Polarization: 13.34 SS G_CDS: -1.98 Total: 11.36 kcal Atomic # 14 Polarization: -11.59 SS G_CDS: 2.10 Total: -9.50 kcal Total: -82.43 1.09 -81.33 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_10803934.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 196.273 kcal (2) G-P(sol) polarization free energy of solvation -82.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 113.847 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.091 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -81.334 kcal (6) G-S(sol) free energy of system = (1) + (5) 114.939 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds