Wall clock time and date at job start Sun Mar 7 2021 06:23:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46492 * 1 3 3 C 1.37651 * 125.68142 * 2 1 4 4 C 1.46680 * 126.23168 * 0.02562 * 3 2 1 5 5 O 1.21695 * 119.99765 * 5.29502 * 4 3 2 6 6 N 1.34777 * 120.00168 * 185.28800 * 4 3 2 7 7 C 1.46507 * 119.99874 * 174.95293 * 6 4 3 8 8 H 1.08992 * 112.90601 * 23.75177 * 7 6 4 9 9 C 1.53776 * 113.61025 * 155.00292 * 7 6 4 10 10 C 1.53782 * 87.08020 * 139.98052 * 9 7 6 11 11 H 1.09003 * 113.61391 * 89.11136 * 10 9 7 12 12 C 1.52999 * 113.61455 * 220.01695 * 10 9 7 13 13 N 1.46906 * 109.47205 * 184.99679 * 12 10 9 14 14 H 1.00897 * 109.47080 * 305.00217 * 13 12 10 15 15 C 1.46895 * 109.46651 * 64.99948 * 13 12 10 16 16 C 1.46898 * 109.47278 * 184.99804 * 13 12 10 17 17 C 1.53782 * 87.08218 * 334.56308 * 10 9 7 18 18 C 1.37870 * 107.53901 * 180.28361 * 3 2 1 19 19 C 1.39844 * 107.08091 * 359.58370 * 18 3 2 20 20 C 1.35447 * 107.86362 * 0.41898 * 19 18 3 21 21 C 1.50701 * 125.56244 * 179.77475 * 20 19 18 22 22 O 1.42898 * 109.47267 * 149.96154 * 21 20 19 23 23 Si 1.86296 * 109.47345 * 29.95779 * 21 20 19 24 24 H 1.09004 * 109.46945 * 95.78214 * 1 2 3 25 25 H 1.08996 * 109.47472 * 215.78275 * 1 2 3 26 26 H 1.08999 * 109.47406 * 335.78559 * 1 2 3 27 27 H 0.96994 * 120.00086 * 354.95646 * 6 4 3 28 28 H 1.08993 * 113.61876 * 25.43005 * 9 7 6 29 29 H 1.09008 * 113.61509 * 254.52617 * 9 7 6 30 30 H 1.08996 * 109.47495 * 304.99786 * 12 10 9 31 31 H 1.09003 * 109.46979 * 64.99942 * 12 10 9 32 32 H 1.08998 * 109.47783 * 299.99773 * 15 13 12 33 33 H 1.09006 * 109.47182 * 60.00433 * 15 13 12 34 34 H 1.09001 * 109.47089 * 180.02562 * 15 13 12 35 35 H 1.09002 * 109.46694 * 59.99828 * 16 13 12 36 36 H 1.08999 * 109.47312 * 179.97438 * 16 13 12 37 37 H 1.09001 * 109.46998 * 300.00642 * 16 13 12 38 38 H 1.09003 * 113.61391 * 139.97679 * 17 10 9 39 39 H 1.08998 * 113.61681 * 270.80110 * 17 10 9 40 40 H 1.08000 * 126.46070 * 179.70543 * 18 3 2 41 41 H 1.07999 * 126.06634 * 180.17877 * 19 18 3 42 42 H 1.09007 * 109.47105 * 269.95726 * 21 20 19 43 43 H 0.96704 * 114.00121 * 299.99823 * 22 21 20 44 44 H 1.48502 * 110.00023 * 58.67978 * 23 21 20 45 45 H 1.48493 * 110.00215 * 180.02562 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8124 2.5124 0.0005 5 8 0.6260 2.7649 0.0983 6 7 2.7079 3.5139 -0.1071 7 6 2.2469 4.9001 -0.2179 8 1 1.2504 5.0502 0.1973 9 6 3.2782 5.9328 0.2665 10 6 2.8529 6.8016 -0.9290 11 1 2.0220 7.4716 -0.7081 12 6 4.0211 7.5088 -1.6190 13 7 3.5042 8.4017 -2.6648 14 1 2.9215 7.8755 -3.2985 15 6 2.7119 9.4730 -2.0463 16 6 4.6279 8.9894 -3.4063 17 6 2.4251 5.4980 -1.6236 18 6 3.5779 0.6888 -0.0065 19 6 3.5521 -0.7094 -0.0007 20 6 2.2555 -1.1010 -0.0004 21 6 1.7708 -2.5279 0.0002 22 8 0.5134 -2.6037 0.6747 23 14 3.0121 -3.6050 0.8775 24 1 -0.3633 -0.1035 -1.0225 25 1 -0.3634 -0.8336 0.6009 26 1 -0.3634 0.9372 0.4215 27 1 3.6577 3.3169 -0.1112 28 1 4.3084 5.5821 0.2068 29 1 3.0349 6.3721 1.2340 30 1 4.5771 8.0924 -0.8853 31 1 4.6808 6.7666 -2.0684 32 1 1.8781 9.0370 -1.4961 33 1 3.3414 10.0415 -1.3616 34 1 2.3280 10.1352 -2.8222 35 1 5.2158 8.1944 -3.8651 36 1 4.2444 9.6515 -4.1825 37 1 5.2574 9.5578 -2.7216 38 1 1.4931 5.5862 -2.1819 39 1 3.2218 5.0292 -2.2011 40 1 4.4583 1.3144 -0.0127 41 1 4.4132 -1.3612 -0.0008 42 1 1.6531 -2.8721 -1.0274 43 1 0.5432 -2.3121 1.5963 44 1 3.2053 -3.1266 2.2700 45 1 2.5461 -5.0149 0.8844 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_10803936.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:23:30 Heat of formation + Delta-G solvation = 115.840301 kcal Electronic energy + Delta-G solvation = -24140.249387 eV Core-core repulsion = 20665.723510 eV Total energy + Delta-G solvation = -3474.525877 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.181 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.65407 -42.12469 -40.59655 -38.98897 -37.99202 -35.01945 -33.70003 -31.54157 -30.00288 -29.38420 -27.59674 -27.07766 -26.84894 -25.65038 -23.99839 -22.81692 -21.47726 -21.14366 -20.34163 -19.28500 -18.86873 -18.21848 -17.86899 -17.41718 -17.01264 -16.88879 -16.29793 -16.12844 -16.06160 -15.48754 -15.40242 -14.93364 -14.59578 -14.51795 -14.29182 -13.88315 -13.82840 -13.57155 -13.47991 -13.42147 -13.27621 -13.24426 -13.18023 -12.96491 -12.93460 -12.43690 -12.21066 -12.00226 -11.76544 -11.50499 -11.26784 -10.85411 -10.17992 -9.77620 -9.13194 -4.93430 0.31514 1.03316 1.13668 1.51678 1.67886 1.74007 1.99844 2.27795 2.32750 2.93213 2.97626 3.09553 3.17585 3.40128 3.43668 3.52793 3.67862 3.73738 3.81927 3.87532 3.93379 4.17562 4.22900 4.26229 4.31533 4.36298 4.37484 4.43876 4.51076 4.51539 4.64362 4.67652 4.71708 4.72541 4.80660 4.87079 4.89131 4.95701 5.05201 5.07635 5.13928 5.19519 5.49915 5.70391 5.99256 6.06558 6.23929 6.44239 7.09737 Molecular weight = 295.18amu Principal moments of inertia in cm(-1) A = 0.035581 B = 0.002895 C = 0.002782 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 786.752844 B = 9669.625924 C =10062.753867 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.409 5.409 3 C -0.087 4.087 4 C 0.586 3.414 5 O -0.591 6.591 6 N -0.693 5.693 7 C 0.096 3.904 8 H 0.085 0.915 9 C -0.126 4.126 10 C -0.119 4.119 11 H 0.125 0.875 12 C 0.012 3.988 13 N -0.373 5.373 14 H 0.436 0.564 15 C -0.055 4.055 16 C -0.046 4.046 17 C -0.151 4.151 18 C -0.122 4.122 19 C -0.202 4.202 20 C 0.003 3.997 21 C -0.066 4.066 22 O -0.548 6.548 23 Si 0.814 3.186 24 H 0.068 0.932 25 H 0.105 0.895 26 H 0.089 0.911 27 H 0.419 0.581 28 H 0.117 0.883 29 H 0.078 0.922 30 H 0.145 0.855 31 H 0.147 0.853 32 H 0.118 0.882 33 H 0.124 0.876 34 H 0.125 0.875 35 H 0.126 0.874 36 H 0.123 0.877 37 H 0.121 0.879 38 H 0.072 0.928 39 H 0.113 0.887 40 H 0.184 0.816 41 H 0.181 0.819 42 H 0.130 0.870 43 H 0.386 0.614 44 H -0.290 1.290 45 H -0.305 1.305 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.715 29.457 -11.257 34.002 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.083 5.083 3 C -0.200 4.200 4 C 0.376 3.624 5 O -0.474 6.474 6 N -0.344 5.344 7 C -0.008 4.008 8 H 0.103 0.897 9 C -0.164 4.164 10 C -0.138 4.138 11 H 0.143 0.857 12 C -0.110 4.110 13 N 0.051 4.949 14 H 0.272 0.728 15 C -0.197 4.197 16 C -0.188 4.188 17 C -0.190 4.190 18 C -0.148 4.148 19 C -0.226 4.226 20 C -0.115 4.115 21 C -0.174 4.174 22 O -0.356 6.356 23 Si 0.717 3.283 24 H 0.087 0.913 25 H 0.123 0.877 26 H 0.107 0.893 27 H 0.258 0.742 28 H 0.135 0.865 29 H 0.097 0.903 30 H 0.163 0.837 31 H 0.165 0.835 32 H 0.136 0.864 33 H 0.142 0.858 34 H 0.144 0.856 35 H 0.145 0.855 36 H 0.142 0.858 37 H 0.140 0.860 38 H 0.091 0.909 39 H 0.131 0.869 40 H 0.201 0.799 41 H 0.198 0.802 42 H 0.148 0.852 43 H 0.235 0.765 44 H -0.217 1.217 45 H -0.233 1.233 Dipole moment (debyes) X Y Z Total from point charges 11.590 29.100 -10.958 33.184 hybrid contribution -1.525 -0.279 0.744 1.720 sum 10.065 28.821 -10.214 32.191 Atomic orbital electron populations 1.22484 0.76310 1.05690 1.03995 1.43925 1.06941 1.04906 1.52492 1.20399 0.91483 0.87559 1.20588 1.17236 0.85465 0.84461 0.75271 1.90778 1.18437 1.85323 1.52814 1.45477 1.09842 1.05522 1.73601 1.22742 0.99831 0.78992 0.99275 0.89721 1.23343 1.00138 0.94190 0.98759 1.22766 0.98776 0.95640 0.96582 0.85673 1.23903 0.98063 0.96487 0.92534 1.44815 1.17166 1.16203 1.16714 0.72805 1.24195 0.99732 0.91695 1.04091 1.24137 0.89879 1.04324 1.00446 1.23755 1.03610 0.95588 0.96026 1.21726 0.94363 0.95435 1.03276 1.21048 0.95134 0.96129 1.10275 1.21389 0.91788 0.89110 1.09201 1.25189 0.93087 0.94707 1.04408 1.86575 1.30772 1.88443 1.29839 0.93429 0.82719 0.73268 0.78854 0.91319 0.87715 0.89271 0.74233 0.86487 0.90343 0.83708 0.83510 0.86364 0.85755 0.85633 0.85534 0.85844 0.86005 0.90889 0.86919 0.79922 0.80154 0.85204 0.76452 1.21706 1.23278 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.61 10.32 127.77 1.32 0.71 16 2 N -0.41 4.81 3.16 -519.73 -1.64 3.17 16 3 C -0.09 1.31 6.88 40.35 0.28 1.59 16 4 C 0.59 -9.48 7.77 86.45 0.67 -8.81 16 5 O -0.59 4.54 14.12 -4.33 -0.06 4.48 16 6 N -0.69 19.57 5.34 -443.99 -2.37 17.20 16 7 C 0.10 -3.26 4.27 45.52 0.19 -3.06 16 8 H 0.08 -2.19 7.42 -2.39 -0.02 -2.21 16 9 C -0.13 5.51 7.39 31.12 0.23 5.74 16 10 C -0.12 6.26 3.58 -10.27 -0.04 6.22 16 11 H 0.13 -6.75 6.10 -2.39 -0.01 -6.76 16 12 C 0.01 -0.75 4.48 86.30 0.39 -0.36 16 13 N -0.37 24.60 0.66 -948.84 -0.62 23.98 16 14 H 0.44 -29.71 8.44 -89.70 -0.76 -30.46 16 15 C -0.05 3.45 8.97 127.69 1.15 4.59 16 16 C -0.05 2.97 9.19 127.69 1.17 4.14 16 17 C -0.15 6.69 7.43 31.12 0.23 6.92 16 18 C -0.12 2.53 10.36 22.57 0.23 2.76 16 19 C -0.20 3.80 9.37 22.01 0.21 4.01 16 20 C 0.00 -0.04 6.14 41.34 0.25 0.22 16 21 C -0.07 1.00 2.99 71.24 0.21 1.21 16 22 O -0.55 6.52 10.11 -148.98 -1.51 5.01 16 23 Si 0.81 -13.29 31.10 68.60 2.13 -11.16 16 24 H 0.07 -0.73 8.14 -2.38 -0.02 -0.75 16 25 H 0.10 -1.29 5.25 -2.39 -0.01 -1.31 16 26 H 0.09 -0.71 5.91 -2.39 -0.01 -0.73 16 27 H 0.42 -14.47 7.63 -92.71 -0.71 -15.18 16 28 H 0.12 -5.50 8.08 -2.39 -0.02 -5.52 16 29 H 0.08 -3.14 8.14 -2.38 -0.02 -3.16 16 30 H 0.14 -9.18 8.09 -2.39 -0.02 -9.20 16 31 H 0.15 -9.41 7.79 -2.39 -0.02 -9.43 16 32 H 0.12 -7.22 6.10 -2.39 -0.01 -7.24 16 33 H 0.12 -7.74 8.11 -2.38 -0.02 -7.76 16 34 H 0.13 -7.81 8.14 -2.39 -0.02 -7.83 16 35 H 0.13 -8.13 8.11 -2.39 -0.02 -8.15 16 36 H 0.12 -7.81 8.14 -2.39 -0.02 -7.83 16 37 H 0.12 -7.73 8.14 -2.39 -0.02 -7.75 16 38 H 0.07 -2.98 8.14 -2.39 -0.02 -3.00 16 39 H 0.11 -5.29 7.89 -2.39 -0.02 -5.31 16 40 H 0.18 -5.44 7.45 -2.91 -0.02 -5.47 16 41 H 0.18 -4.49 6.85 -2.91 -0.02 -4.51 16 42 H 0.13 -2.15 7.96 -2.38 -0.02 -2.17 16 43 H 0.39 -6.28 8.32 -74.05 -0.62 -6.90 16 44 H -0.29 3.13 7.11 99.48 0.71 3.84 16 45 H -0.30 2.33 7.11 99.48 0.71 3.04 16 Total: 1.00 -84.59 352.21 1.40 -83.20 By element: Atomic # 1 Polarization: -150.72 SS G_CDS: -1.03 Total: -151.75 kcal Atomic # 6 Polarization: 19.37 SS G_CDS: 6.50 Total: 25.88 kcal Atomic # 7 Polarization: 48.99 SS G_CDS: -4.64 Total: 44.35 kcal Atomic # 8 Polarization: 11.06 SS G_CDS: -1.57 Total: 9.49 kcal Atomic # 14 Polarization: -13.29 SS G_CDS: 2.13 Total: -11.16 kcal Total: -84.59 1.40 -83.20 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_10803936.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 199.037 kcal (2) G-P(sol) polarization free energy of solvation -84.594 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.397 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -83.197 kcal (6) G-S(sol) free energy of system = (1) + (5) 115.840 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds