Wall clock time and date at job start Sun Mar 7 2021 06:23:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 H 1.00903 * 109.47074 * 2 1 4 4 C 1.46902 * 109.47015 * 119.99442 * 2 1 3 5 5 C 1.46897 * 109.47322 * 239.99139 * 2 1 3 6 6 C 1.53006 * 109.47238 * 174.99969 * 5 2 1 7 7 H 1.09004 * 112.84902 * 316.20196 * 6 5 2 8 8 C 1.53784 * 113.61067 * 87.50302 * 6 5 2 9 9 C 1.53781 * 87.07806 * 139.98349 * 8 6 5 10 10 H 1.08999 * 113.69371 * 89.12531 * 9 8 6 11 11 N 1.46500 * 113.61647 * 220.02168 * 9 8 6 12 12 C 1.34770 * 119.99945 * 252.49956 * 11 9 8 13 13 O 1.21719 * 120.00509 * 359.97438 * 12 11 9 14 14 C 1.46572 * 119.99891 * 179.97438 * 12 11 9 15 15 C 1.40855 * 126.57629 * 180.02562 * 14 12 11 16 16 C 1.40093 * 132.87093 * 359.96875 * 15 14 12 17 17 C 1.36451 * 119.25434 * 179.97438 * 16 15 14 18 18 C 1.50702 * 120.29593 * 179.97438 * 17 16 15 19 19 O 1.42894 * 109.47292 * 119.99724 * 18 17 16 20 20 Si 1.86298 * 109.47043 * 239.99745 * 18 17 16 21 21 C 1.40159 * 119.40983 * 359.97438 * 17 16 15 22 22 C 1.35184 * 120.31797 * 359.97438 * 21 17 16 23 23 N 1.36240 * 120.71053 * 0.04488 * 22 21 17 24 24 N 1.40011 * 132.01369 * 180.30022 * 23 22 21 25 25 C 1.30742 * 109.60548 * 180.11170 * 24 23 22 26 26 C 1.53774 * 113.61595 * 185.00016 * 6 5 2 27 27 H 1.08996 * 109.47207 * 180.02562 * 1 2 3 28 28 H 1.09001 * 109.47040 * 300.00629 * 1 2 3 29 29 H 1.08996 * 109.46796 * 60.00335 * 1 2 3 30 30 H 1.09001 * 109.47279 * 180.02562 * 4 2 1 31 31 H 1.09001 * 109.47158 * 299.99856 * 4 2 1 32 32 H 1.09000 * 109.47380 * 59.99671 * 4 2 1 33 33 H 1.09001 * 109.46670 * 55.00739 * 5 2 1 34 34 H 1.08991 * 109.47462 * 295.00361 * 5 2 1 35 35 H 1.09000 * 113.61519 * 25.43936 * 8 6 5 36 36 H 1.08995 * 113.61515 * 254.53200 * 8 6 5 37 37 H 0.97005 * 120.00145 * 72.49383 * 11 9 8 38 38 H 1.07995 * 120.37165 * 0.02562 * 16 15 14 39 39 H 1.09001 * 109.46619 * 359.97438 * 18 17 16 40 40 H 0.96696 * 114.00315 * 180.02562 * 19 18 17 41 41 H 1.48501 * 109.99973 * 300.00034 * 20 18 17 42 42 H 1.48504 * 110.00091 * 61.31538 * 20 18 17 43 43 H 1.08000 * 119.84162 * 180.02562 * 21 17 16 44 44 H 1.08003 * 119.64582 * 179.97438 * 22 21 17 45 45 H 1.08002 * 125.63185 * 179.84462 * 25 24 23 46 46 H 1.09001 * 113.61167 * 105.47252 * 26 6 5 47 47 H 1.09004 * 113.68936 * 334.58813 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6924 1.1995 5 6 1.9587 -0.6926 -1.1993 6 6 3.4836 -0.5847 -1.2637 7 1 3.8474 0.4155 -1.0284 8 6 4.2130 -1.7029 -0.5006 9 6 5.2160 -1.7360 -1.6659 10 1 6.0552 -1.0517 -1.5410 11 7 5.6358 -3.0886 -2.0407 12 6 6.8780 -3.5163 -1.7400 13 8 7.6513 -2.7786 -1.1574 14 6 7.2978 -4.8697 -2.1145 15 6 8.5548 -5.4564 -1.8702 16 6 9.7193 -4.9899 -1.2466 17 6 10.8045 -5.8126 -1.1596 18 6 12.0694 -5.3347 -0.4942 19 8 12.3722 -6.1809 0.6167 20 14 13.4734 -5.3896 -1.7175 21 6 10.7322 -7.1061 -1.6945 22 6 9.5976 -7.5354 -2.2910 23 7 8.5090 -6.7214 -2.3832 24 7 7.2367 -6.9169 -2.9339 25 6 6.5225 -5.8320 -2.7843 26 6 4.0891 -1.1740 -2.5485 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 3.0486 -0.6920 1.1998 31 1 1.5953 -0.1785 2.0895 32 1 1.5953 -1.7200 1.1997 33 1 1.5241 -0.2331 -2.0871 34 1 1.6703 -1.7428 -1.1556 35 1 3.6283 -2.6175 -0.4018 36 1 4.6500 -1.3748 0.4424 37 1 5.0197 -3.6765 -2.5052 38 1 9.7575 -3.9907 -0.8387 39 1 11.9319 -4.3113 -0.1451 40 1 13.1756 -5.9315 1.0936 41 1 13.6711 -6.7795 -2.2016 42 1 13.1849 -4.4892 -2.8626 43 1 11.5867 -7.7632 -1.6291 44 1 9.5540 -8.5341 -2.6999 45 1 5.5036 -5.6986 -3.1167 46 1 4.4261 -0.4189 -3.2586 47 1 3.4712 -1.9439 -3.0107 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_11618758.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:23:35 Heat of formation + Delta-G solvation = 198.751071 kcal Electronic energy + Delta-G solvation = -28174.097248 eV Core-core repulsion = 24253.062320 eV Total energy + Delta-G solvation = -3921.034929 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.176 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -44.51012 -44.06090 -41.99741 -40.34632 -39.81468 -37.99225 -35.77755 -34.97607 -32.92111 -32.41246 -31.96580 -30.97077 -28.52950 -28.27489 -27.85454 -26.24762 -25.37191 -24.31481 -23.65125 -22.73998 -22.10234 -21.42138 -20.23552 -20.00201 -19.75453 -19.16909 -18.79924 -18.42429 -18.10811 -17.75326 -17.67124 -17.46743 -16.99221 -16.60285 -16.40265 -16.26158 -16.19686 -16.03520 -15.89903 -15.86883 -15.56682 -15.29256 -15.24553 -15.11494 -15.01543 -14.64235 -14.55713 -14.07304 -14.04847 -13.75379 -13.47422 -13.27693 -13.19807 -12.79371 -12.59463 -12.33686 -11.75900 -11.49702 -11.19631 -10.94732 -9.55875 -5.71963 -1.44241 -1.31593 -0.85575 0.21348 0.22589 0.49811 0.51497 0.55268 0.71921 0.95492 1.12238 1.23635 1.29349 1.34027 1.46498 1.61978 1.67905 1.70083 1.80275 1.87422 1.97774 2.04384 2.20091 2.23527 2.26284 2.29714 2.32926 2.36619 2.37327 2.70681 2.90379 2.91772 2.95340 2.96187 3.08242 3.12419 3.16297 3.23203 3.35536 3.37999 3.53036 3.55043 3.73424 3.83559 3.99931 4.30126 4.38202 4.42959 4.47460 4.88945 5.44680 5.58747 5.85102 6.36171 Molecular weight = 332.18amu Principal moments of inertia in cm(-1) A = 0.019964 B = 0.002424 C = 0.002297 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1402.217470 B =11549.171327 C =12185.774525 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.386 5.386 3 H 0.427 0.573 4 C -0.056 4.056 5 C 0.002 3.998 6 C -0.143 4.143 7 H 0.117 0.883 8 C -0.162 4.162 9 C 0.134 3.866 10 H 0.124 0.876 11 N -0.725 5.725 12 C 0.608 3.392 13 O -0.545 6.545 14 C -0.329 4.329 15 C 0.174 3.826 16 C -0.101 4.101 17 C -0.021 4.021 18 C -0.074 4.074 19 O -0.542 6.542 20 Si 0.705 3.295 21 C -0.143 4.143 22 C 0.116 3.884 23 N -0.263 5.263 24 N -0.309 5.309 25 C 0.120 3.880 26 C -0.133 4.133 27 H 0.121 0.879 28 H 0.124 0.876 29 H 0.123 0.877 30 H 0.127 0.873 31 H 0.123 0.877 32 H 0.121 0.879 33 H 0.133 0.867 34 H 0.130 0.870 35 H 0.096 0.904 36 H 0.086 0.914 37 H 0.401 0.599 38 H 0.165 0.835 39 H 0.083 0.917 40 H 0.390 0.610 41 H -0.247 1.247 42 H -0.255 1.255 43 H 0.165 0.835 44 H 0.181 0.819 45 H 0.197 0.803 46 H 0.092 0.908 47 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -24.212 17.181 6.100 30.309 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 N 0.039 4.961 3 H 0.262 0.738 4 C -0.198 4.198 5 C -0.119 4.119 6 C -0.163 4.163 7 H 0.135 0.865 8 C -0.200 4.200 9 C 0.028 3.972 10 H 0.141 0.859 11 N -0.376 5.376 12 C 0.398 3.602 13 O -0.424 6.424 14 C -0.344 4.344 15 C 0.052 3.948 16 C -0.121 4.121 17 C -0.027 4.027 18 C -0.184 4.184 19 O -0.349 6.349 20 Si 0.604 3.396 21 C -0.164 4.164 22 C -0.010 4.010 23 N -0.027 5.027 24 N -0.129 5.129 25 C -0.062 4.062 26 C -0.172 4.172 27 H 0.140 0.860 28 H 0.143 0.857 29 H 0.142 0.858 30 H 0.146 0.854 31 H 0.142 0.858 32 H 0.140 0.860 33 H 0.151 0.849 34 H 0.148 0.852 35 H 0.115 0.885 36 H 0.104 0.896 37 H 0.235 0.765 38 H 0.182 0.818 39 H 0.101 0.899 40 H 0.239 0.761 41 H -0.171 1.171 42 H -0.180 1.180 43 H 0.183 0.817 44 H 0.198 0.802 45 H 0.214 0.786 46 H 0.111 0.889 47 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -24.172 15.708 4.970 29.253 hybrid contribution -0.907 0.736 0.136 1.175 sum -25.078 16.444 5.106 30.420 Atomic orbital electron populations 1.24136 0.75666 1.09586 1.09588 1.45081 1.16176 1.18928 1.15937 0.73786 1.24322 1.06431 1.02341 0.86673 1.24081 0.98188 1.02420 0.87228 1.22946 0.89964 1.01740 1.01615 0.86465 1.23918 0.98639 0.97771 0.99714 1.22249 0.96082 0.85327 0.93506 0.85856 1.45586 1.14932 1.15117 1.61943 1.16861 0.80972 0.84981 0.77389 1.90802 1.52669 1.56596 1.42285 1.19432 0.95003 0.98109 1.21840 1.19253 0.95324 0.85312 0.94870 1.20664 0.88940 1.02383 1.00110 1.19519 0.94029 0.93414 0.95719 1.24692 1.00558 0.96346 0.96762 1.86466 1.49418 1.55095 1.43954 0.95073 0.82703 0.82202 0.79641 1.20933 0.98292 0.97158 1.00025 1.21667 0.83275 0.96854 0.99210 1.46098 1.10518 1.10012 1.36087 1.77671 0.87960 1.23282 1.23939 1.23994 0.99402 0.89378 0.93438 1.23374 0.97049 1.01242 0.95528 0.86033 0.85720 0.85832 0.85442 0.85830 0.86031 0.84918 0.85188 0.88536 0.89569 0.76460 0.81798 0.89913 0.76123 1.17089 1.17961 0.81733 0.80160 0.78647 0.88941 0.88370 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.51 9.19 60.06 0.55 2.07 16 2 N -0.39 12.51 0.66 -251.26 -0.17 12.35 16 3 H 0.43 -14.57 8.41 -39.29 -0.33 -14.90 16 4 C -0.06 1.71 8.57 60.07 0.51 2.22 16 5 C 0.00 -0.07 4.57 -3.82 -0.02 -0.09 16 6 C -0.14 3.75 3.31 -89.81 -0.30 3.45 16 7 H 0.12 -3.15 8.10 -51.93 -0.42 -3.57 16 8 C -0.16 3.63 5.69 -25.92 -0.15 3.49 16 9 C 0.13 -2.40 4.24 -67.12 -0.28 -2.68 16 10 H 0.12 -1.86 7.46 -51.93 -0.39 -2.25 16 11 N -0.72 10.67 5.34 -54.36 -0.29 10.38 16 12 C 0.61 -5.52 7.78 -12.90 -0.10 -5.63 16 13 O -0.55 3.11 15.30 5.17 0.08 3.19 16 14 C -0.33 2.49 6.17 -104.67 -0.65 1.84 16 15 C 0.17 -0.95 6.76 -84.06 -0.57 -1.52 16 16 C -0.10 0.61 9.35 -39.53 -0.37 0.24 16 17 C -0.02 0.14 4.53 -104.54 -0.47 -0.33 16 18 C -0.07 0.65 2.81 36.01 0.10 0.75 16 19 O -0.54 4.57 12.76 -35.23 -0.45 4.12 16 20 Si 0.71 -6.39 31.97 -169.99 -5.43 -11.83 16 21 C -0.14 1.02 8.67 -39.95 -0.35 0.67 16 22 C 0.12 -0.81 11.17 -16.68 -0.19 -0.99 16 23 N -0.26 1.41 3.86 -10.54 -0.04 1.37 16 24 N -0.31 1.74 12.57 30.75 0.39 2.12 16 25 C 0.12 -1.08 11.44 -17.14 -0.20 -1.28 16 26 C -0.13 2.91 7.39 -25.92 -0.19 2.72 16 27 H 0.12 -3.77 8.14 -51.93 -0.42 -4.19 16 28 H 0.12 -3.91 8.14 -51.93 -0.42 -4.33 16 29 H 0.12 -3.88 8.11 -51.93 -0.42 -4.30 16 30 H 0.13 -3.74 5.13 -51.93 -0.27 -4.00 16 31 H 0.12 -3.79 8.14 -51.93 -0.42 -4.21 16 32 H 0.12 -3.67 8.11 -51.93 -0.42 -4.09 16 33 H 0.13 -4.07 8.09 -51.93 -0.42 -4.49 16 34 H 0.13 -3.93 7.79 -51.93 -0.40 -4.33 16 35 H 0.10 -2.22 7.90 -51.93 -0.41 -2.63 16 36 H 0.09 -1.87 7.18 -51.93 -0.37 -2.24 16 37 H 0.40 -6.93 7.65 -40.82 -0.31 -7.24 16 38 H 0.16 -1.06 7.01 -52.49 -0.37 -1.42 16 39 H 0.08 -0.84 7.70 -51.93 -0.40 -1.24 16 40 H 0.39 -5.10 8.74 45.56 0.40 -4.70 16 41 H -0.25 1.61 7.07 56.52 0.40 2.01 16 42 H -0.26 1.48 7.11 56.52 0.40 1.89 16 43 H 0.17 -1.41 7.52 -52.49 -0.39 -1.80 16 44 H 0.18 -1.73 8.06 -52.48 -0.42 -2.15 16 45 H 0.20 -2.78 7.46 -52.49 -0.39 -3.18 16 46 H 0.09 -1.89 8.14 -51.93 -0.42 -2.31 16 47 H 0.10 -2.22 8.08 -51.93 -0.42 -2.64 16 LS Contribution 379.35 15.07 5.72 5.72 Total: 1.00 -40.08 379.35 -9.91 -49.99 By element: Atomic # 1 Polarization: -75.29 SS G_CDS: -7.06 Total: -82.35 kcal Atomic # 6 Polarization: 7.59 SS G_CDS: -2.66 Total: 4.93 kcal Atomic # 7 Polarization: 26.33 SS G_CDS: -0.11 Total: 26.22 kcal Atomic # 8 Polarization: 7.69 SS G_CDS: -0.37 Total: 7.32 kcal Atomic # 14 Polarization: -6.39 SS G_CDS: -5.43 Total: -11.83 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -40.08 -9.91 -49.99 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_11618758.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 248.745 kcal (2) G-P(sol) polarization free energy of solvation -40.085 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 208.661 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.909 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -49.994 kcal (6) G-S(sol) free energy of system = (1) + (5) 198.751 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds