Wall clock time and date at job start Sun Mar 7 2021 06:23:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 H 1.00903 * 109.47074 * 2 1 4 4 C 1.46902 * 109.47015 * 119.99442 * 2 1 3 5 5 C 1.46897 * 109.47322 * 239.99139 * 2 1 3 6 6 C 1.53006 * 109.47238 * 174.99969 * 5 2 1 7 7 H 1.09004 * 112.84902 * 316.20196 * 6 5 2 8 8 C 1.53784 * 113.61067 * 87.50302 * 6 5 2 9 9 C 1.53781 * 87.07806 * 139.98349 * 8 6 5 10 10 H 1.08999 * 113.69371 * 89.12531 * 9 8 6 11 11 N 1.46500 * 113.61647 * 220.02168 * 9 8 6 12 12 C 1.34770 * 119.99945 * 252.49956 * 11 9 8 13 13 O 1.21719 * 120.00509 * 359.97438 * 12 11 9 14 14 C 1.46572 * 119.99891 * 179.97438 * 12 11 9 15 15 C 1.40855 * 126.57629 * 180.02562 * 14 12 11 16 16 C 1.40093 * 132.87093 * 359.96875 * 15 14 12 17 17 C 1.36451 * 119.25434 * 179.97438 * 16 15 14 18 18 C 1.50702 * 120.29593 * 179.97438 * 17 16 15 19 19 O 1.42894 * 109.47292 * 119.99724 * 18 17 16 20 20 Si 1.86298 * 109.47043 * 239.99745 * 18 17 16 21 21 C 1.40159 * 119.40983 * 359.97438 * 17 16 15 22 22 C 1.35184 * 120.31797 * 359.97438 * 21 17 16 23 23 N 1.36240 * 120.71053 * 0.04488 * 22 21 17 24 24 N 1.40011 * 132.01369 * 180.30022 * 23 22 21 25 25 C 1.30742 * 109.60548 * 180.11170 * 24 23 22 26 26 C 1.53774 * 113.61595 * 185.00016 * 6 5 2 27 27 H 1.08996 * 109.47207 * 180.02562 * 1 2 3 28 28 H 1.09001 * 109.47040 * 300.00629 * 1 2 3 29 29 H 1.08996 * 109.46796 * 60.00335 * 1 2 3 30 30 H 1.09001 * 109.47279 * 180.02562 * 4 2 1 31 31 H 1.09001 * 109.47158 * 299.99856 * 4 2 1 32 32 H 1.09000 * 109.47380 * 59.99671 * 4 2 1 33 33 H 1.09001 * 109.46670 * 55.00739 * 5 2 1 34 34 H 1.08991 * 109.47462 * 295.00361 * 5 2 1 35 35 H 1.09000 * 113.61519 * 25.43936 * 8 6 5 36 36 H 1.08995 * 113.61515 * 254.53200 * 8 6 5 37 37 H 0.97005 * 120.00145 * 72.49383 * 11 9 8 38 38 H 1.07995 * 120.37165 * 0.02562 * 16 15 14 39 39 H 1.09001 * 109.46619 * 359.97438 * 18 17 16 40 40 H 0.96696 * 114.00315 * 180.02562 * 19 18 17 41 41 H 1.48501 * 109.99973 * 300.00034 * 20 18 17 42 42 H 1.48504 * 110.00091 * 61.31538 * 20 18 17 43 43 H 1.08000 * 119.84162 * 180.02562 * 21 17 16 44 44 H 1.08003 * 119.64582 * 179.97438 * 22 21 17 45 45 H 1.08002 * 125.63185 * 179.84462 * 25 24 23 46 46 H 1.09001 * 113.61167 * 105.47252 * 26 6 5 47 47 H 1.09004 * 113.68936 * 334.58813 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6924 1.1995 5 6 1.9587 -0.6926 -1.1993 6 6 3.4836 -0.5847 -1.2637 7 1 3.8474 0.4155 -1.0284 8 6 4.2130 -1.7029 -0.5006 9 6 5.2160 -1.7360 -1.6659 10 1 6.0552 -1.0517 -1.5410 11 7 5.6358 -3.0886 -2.0407 12 6 6.8780 -3.5163 -1.7400 13 8 7.6513 -2.7786 -1.1574 14 6 7.2978 -4.8697 -2.1145 15 6 8.5548 -5.4564 -1.8702 16 6 9.7193 -4.9899 -1.2466 17 6 10.8045 -5.8126 -1.1596 18 6 12.0694 -5.3347 -0.4942 19 8 12.3722 -6.1809 0.6167 20 14 13.4734 -5.3896 -1.7175 21 6 10.7322 -7.1061 -1.6945 22 6 9.5976 -7.5354 -2.2910 23 7 8.5090 -6.7214 -2.3832 24 7 7.2367 -6.9169 -2.9339 25 6 6.5225 -5.8320 -2.7843 26 6 4.0891 -1.1740 -2.5485 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 3.0486 -0.6920 1.1998 31 1 1.5953 -0.1785 2.0895 32 1 1.5953 -1.7200 1.1997 33 1 1.5241 -0.2331 -2.0871 34 1 1.6703 -1.7428 -1.1556 35 1 3.6283 -2.6175 -0.4018 36 1 4.6500 -1.3748 0.4424 37 1 5.0197 -3.6765 -2.5052 38 1 9.7575 -3.9907 -0.8387 39 1 11.9319 -4.3113 -0.1451 40 1 13.1756 -5.9315 1.0936 41 1 13.6711 -6.7795 -2.2016 42 1 13.1849 -4.4892 -2.8626 43 1 11.5867 -7.7632 -1.6291 44 1 9.5540 -8.5341 -2.6999 45 1 5.5036 -5.6986 -3.1167 46 1 4.4261 -0.4189 -3.2586 47 1 3.4712 -1.9439 -3.0107 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_11618758.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:23:35 Heat of formation + Delta-G solvation = 170.067229 kcal Electronic energy + Delta-G solvation = -28175.341073 eV Core-core repulsion = 24253.062320 eV Total energy + Delta-G solvation = -3922.278753 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.176 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -43.45431 -42.20354 -40.67470 -39.34517 -38.85706 -37.32447 -34.72209 -34.30489 -32.31742 -30.80570 -29.80925 -29.47734 -27.44219 -26.67537 -25.94095 -25.14294 -24.21650 -23.32640 -22.76419 -21.46331 -20.86364 -19.28531 -19.05467 -18.44124 -18.21411 -17.86751 -17.63146 -17.38012 -17.07609 -16.91934 -16.54695 -16.09854 -15.92085 -15.71831 -15.54007 -15.13795 -14.64884 -14.46746 -14.34952 -14.00192 -13.91259 -13.56247 -13.50357 -13.46418 -13.38913 -13.27683 -13.16448 -13.06409 -12.82783 -12.63857 -12.34795 -12.17935 -12.03417 -11.79150 -11.73424 -11.46486 -11.03150 -10.90170 -10.29371 -10.07372 -8.94347 -5.06083 -0.73647 -0.28728 0.85862 0.92148 1.04877 1.17753 1.57969 1.86183 1.92088 2.19456 2.36493 2.89357 2.92286 2.98396 3.07783 3.23968 3.36020 3.37770 3.49258 3.55732 3.64658 3.74546 3.75851 3.79948 3.87320 3.99809 4.09411 4.17223 4.22015 4.22175 4.28764 4.35711 4.41396 4.43967 4.49813 4.59615 4.70412 4.73991 4.77757 4.80209 4.86411 4.89067 4.95007 4.97895 5.00155 5.08792 5.15488 5.24209 5.48165 5.58391 6.16385 6.53266 6.80572 7.23545 Molecular weight = 332.18amu Principal moments of inertia in cm(-1) A = 0.019964 B = 0.002424 C = 0.002297 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1402.217470 B =11549.171327 C =12185.774525 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.370 5.370 3 H 0.438 0.562 4 C -0.057 4.057 5 C 0.012 3.988 6 C -0.115 4.115 7 H 0.127 0.873 8 C -0.152 4.152 9 C 0.098 3.902 10 H 0.085 0.915 11 N -0.703 5.703 12 C 0.601 3.399 13 O -0.591 6.591 14 C -0.338 4.338 15 C 0.145 3.855 16 C -0.117 4.117 17 C -0.034 4.034 18 C -0.077 4.077 19 O -0.557 6.557 20 Si 0.793 3.207 21 C -0.153 4.153 22 C 0.108 3.892 23 N -0.277 5.277 24 N -0.342 5.342 25 C 0.133 3.867 26 C -0.128 4.128 27 H 0.119 0.881 28 H 0.123 0.877 29 H 0.127 0.873 30 H 0.114 0.886 31 H 0.126 0.874 32 H 0.121 0.879 33 H 0.150 0.850 34 H 0.139 0.861 35 H 0.110 0.890 36 H 0.076 0.924 37 H 0.415 0.585 38 H 0.159 0.841 39 H 0.097 0.903 40 H 0.409 0.591 41 H -0.279 1.279 42 H -0.303 1.303 43 H 0.177 0.823 44 H 0.201 0.799 45 H 0.245 0.755 46 H 0.077 0.923 47 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.985 17.950 6.307 33.018 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.054 4.946 3 H 0.276 0.724 4 C -0.200 4.200 5 C -0.110 4.110 6 C -0.134 4.134 7 H 0.144 0.856 8 C -0.191 4.191 9 C -0.007 4.007 10 H 0.103 0.897 11 N -0.354 5.354 12 C 0.390 3.610 13 O -0.473 6.473 14 C -0.352 4.352 15 C 0.024 3.976 16 C -0.137 4.137 17 C -0.039 4.039 18 C -0.185 4.185 19 O -0.368 6.368 20 Si 0.697 3.303 21 C -0.174 4.174 22 C -0.017 4.017 23 N -0.041 5.041 24 N -0.162 5.162 25 C -0.048 4.048 26 C -0.166 4.166 27 H 0.137 0.863 28 H 0.142 0.858 29 H 0.146 0.854 30 H 0.133 0.867 31 H 0.145 0.855 32 H 0.140 0.860 33 H 0.168 0.832 34 H 0.157 0.843 35 H 0.128 0.872 36 H 0.095 0.905 37 H 0.252 0.748 38 H 0.176 0.824 39 H 0.115 0.885 40 H 0.262 0.738 41 H -0.206 1.206 42 H -0.231 1.231 43 H 0.194 0.806 44 H 0.218 0.782 45 H 0.261 0.739 46 H 0.096 0.904 47 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -26.982 16.505 5.200 32.055 hybrid contribution -0.080 0.537 0.028 0.544 sum -27.062 17.042 5.228 32.406 Atomic orbital electron populations 1.24123 0.75413 1.09492 1.09741 1.44833 1.16002 1.19304 1.14478 0.72448 1.24271 1.05578 1.02683 0.87452 1.23898 0.94791 1.03656 0.88664 1.22690 0.92787 1.00702 0.97265 0.85551 1.23861 0.97467 0.99964 0.97784 1.22700 0.96685 0.83088 0.98211 0.89663 1.45516 1.13055 1.16470 1.60375 1.16906 0.82389 0.84289 0.77383 1.90767 1.54389 1.57525 1.44624 1.19842 0.94687 0.99115 1.21590 1.19676 0.96402 0.85928 0.95618 1.20698 0.89527 1.02439 1.01018 1.19858 0.94647 0.93636 0.95777 1.24776 0.99733 0.96969 0.97060 1.86422 1.50929 1.55426 1.44017 0.94221 0.80937 0.78164 0.77013 1.21136 0.98786 0.97260 1.00263 1.22094 0.83110 0.97609 0.98920 1.46286 1.10984 1.10197 1.36620 1.77593 0.88301 1.25038 1.25308 1.24731 1.00718 0.87679 0.91628 1.23338 0.95630 1.01219 0.96449 0.86274 0.85808 0.85430 0.86714 0.85541 0.86044 0.83216 0.84267 0.87195 0.90512 0.74767 0.82353 0.88530 0.73832 1.20562 1.23093 0.80612 0.78191 0.73931 0.90409 0.86760 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.93 9.19 127.69 1.17 4.10 16 2 N -0.37 24.19 0.66 -948.86 -0.62 23.56 16 3 H 0.44 -30.20 8.41 -89.69 -0.75 -30.96 16 4 C -0.06 3.50 8.57 127.69 1.09 4.59 16 5 C 0.01 -0.73 4.57 86.31 0.39 -0.34 16 6 C -0.12 6.01 3.31 -10.27 -0.03 5.98 16 7 H 0.13 -6.78 8.10 -2.38 -0.02 -6.80 16 8 C -0.15 6.66 5.69 31.12 0.18 6.84 16 9 C 0.10 -3.25 4.24 45.52 0.19 -3.06 16 10 H 0.09 -2.17 7.46 -2.39 -0.02 -2.19 16 11 N -0.70 19.22 5.34 -444.09 -2.37 16.85 16 12 C 0.60 -8.88 7.78 86.42 0.67 -8.20 16 13 O -0.59 3.93 15.30 -4.41 -0.07 3.87 16 14 C -0.34 4.11 6.17 -19.90 -0.12 3.98 16 15 C 0.14 -1.04 6.76 39.49 0.27 -0.77 16 16 C -0.12 0.91 9.35 22.30 0.21 1.12 16 17 C -0.03 0.34 4.53 -19.81 -0.09 0.25 16 18 C -0.08 1.17 2.81 71.24 0.20 1.37 16 19 O -0.56 8.64 12.76 -148.98 -1.90 6.74 16 20 Si 0.79 -12.70 31.97 68.60 2.19 -10.50 16 21 C -0.15 1.74 8.67 22.03 0.19 1.93 16 22 C 0.11 -1.20 11.17 83.30 0.93 -0.27 16 23 N -0.28 2.12 3.86 -187.27 -0.72 1.40 16 24 N -0.34 3.16 12.57 -56.62 -0.71 2.45 16 25 C 0.13 -2.22 11.44 85.42 0.98 -1.24 16 26 C -0.13 5.49 7.39 31.12 0.23 5.72 16 27 H 0.12 -7.45 8.14 -2.39 -0.02 -7.47 16 28 H 0.12 -7.77 8.14 -2.39 -0.02 -7.79 16 29 H 0.13 -8.14 8.11 -2.39 -0.02 -8.16 16 30 H 0.11 -6.62 5.13 -2.39 -0.01 -6.63 16 31 H 0.13 -7.70 8.14 -2.39 -0.02 -7.72 16 32 H 0.12 -7.32 8.11 -2.39 -0.02 -7.34 16 33 H 0.15 -9.50 8.09 -2.39 -0.02 -9.52 16 34 H 0.14 -8.66 7.79 -2.39 -0.02 -8.68 16 35 H 0.11 -5.07 7.90 -2.39 -0.02 -5.09 16 36 H 0.08 -3.15 7.18 -2.39 -0.02 -3.17 16 37 H 0.41 -14.09 7.65 -92.70 -0.71 -14.80 16 38 H 0.16 -1.25 7.01 -2.91 -0.02 -1.27 16 39 H 0.10 -1.77 7.70 -2.39 -0.02 -1.78 16 40 H 0.41 -10.44 8.74 -74.06 -0.65 -11.09 16 41 H -0.28 3.01 7.07 99.48 0.70 3.71 16 42 H -0.30 2.47 7.11 99.48 0.71 3.17 16 43 H 0.18 -2.59 7.52 -2.91 -0.02 -2.61 16 44 H 0.20 -3.38 8.06 -2.91 -0.02 -3.41 16 45 H 0.24 -7.06 7.46 -2.91 -0.02 -7.08 16 46 H 0.08 -3.05 8.14 -2.39 -0.02 -3.07 16 47 H 0.11 -5.26 8.08 -2.38 -0.02 -5.28 16 Total: 1.00 -89.86 379.35 1.19 -88.66 By element: Atomic # 1 Polarization: -153.96 SS G_CDS: -1.06 Total: -155.03 kcal Atomic # 6 Polarization: 15.54 SS G_CDS: 6.46 Total: 22.01 kcal Atomic # 7 Polarization: 48.68 SS G_CDS: -4.43 Total: 44.25 kcal Atomic # 8 Polarization: 12.58 SS G_CDS: -1.97 Total: 10.61 kcal Atomic # 14 Polarization: -12.70 SS G_CDS: 2.19 Total: -10.50 kcal Total: -89.86 1.19 -88.66 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_11618758.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 258.732 kcal (2) G-P(sol) polarization free energy of solvation -89.855 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 168.876 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.191 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -88.664 kcal (6) G-S(sol) free energy of system = (1) + (5) 170.067 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds