Wall clock time and date at job start Sun Mar 7 2021 06:23:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35723 * 117.00049 * 2 1 4 4 C 1.38688 * 119.85898 * 359.97438 * 3 2 1 5 5 C 1.38437 * 120.02747 * 179.97438 * 4 3 2 6 6 O 1.35661 * 120.11876 * 180.02562 * 5 4 3 7 7 C 1.42896 * 116.99861 * 0.02562 * 6 5 4 8 8 C 1.40300 * 119.76434 * 0.02562 * 5 4 3 9 9 C 1.47291 * 120.13721 * 179.97438 * 8 5 4 10 10 O 1.21619 * 120.00434 * 0.02562 * 9 8 5 11 11 N 1.34784 * 120.00031 * 180.02562 * 9 8 5 12 12 C 1.46493 * 119.99864 * 179.72844 * 11 9 8 13 13 H 1.09000 * 112.85483 * 334.66378 * 12 11 9 14 14 C 1.53777 * 113.61833 * 105.86275 * 12 11 9 15 15 C 1.53948 * 87.02367 * 139.94761 * 14 12 11 16 16 H 1.09005 * 113.61311 * 89.19577 * 15 14 12 17 17 C 1.53002 * 113.67304 * 220.06971 * 15 14 12 18 18 N 1.46897 * 109.46871 * 272.56395 * 17 15 14 19 19 H 1.00908 * 109.47209 * 304.99405 * 18 17 15 20 20 C 1.46897 * 109.47734 * 64.99334 * 18 17 15 21 21 C 1.46899 * 109.47176 * 184.99891 * 18 17 15 22 22 C 1.53784 * 87.11336 * 334.63865 * 15 14 12 23 23 C 1.39861 * 119.72649 * 0.25716 * 8 5 4 24 24 C 1.37551 * 119.96120 * 359.46493 * 23 8 5 25 25 C 1.50696 * 119.87436 * 180.25169 * 24 23 8 26 26 O 1.42899 * 109.47290 * 255.27760 * 25 24 23 27 27 Si 1.86296 * 109.47382 * 15.28246 * 25 24 23 28 28 H 1.08994 * 109.46822 * 60.00332 * 1 2 3 29 29 H 1.09000 * 109.46957 * 180.02562 * 1 2 3 30 30 H 1.08995 * 109.47145 * 300.00237 * 1 2 3 31 31 H 1.07993 * 119.98225 * 359.97438 * 4 3 2 32 32 H 1.09000 * 109.47361 * 180.02562 * 7 6 5 33 33 H 1.09000 * 109.47182 * 300.00316 * 7 6 5 34 34 H 1.08999 * 109.47519 * 60.00076 * 7 6 5 35 35 H 0.97000 * 119.99339 * 0.02562 * 11 9 8 36 36 H 1.08999 * 113.61600 * 254.53149 * 14 12 11 37 37 H 1.08999 * 113.61274 * 25.42966 * 14 12 11 38 38 H 1.09005 * 109.46690 * 32.55368 * 17 15 14 39 39 H 1.08997 * 109.47398 * 152.56129 * 17 15 14 40 40 H 1.09003 * 109.46773 * 59.99753 * 20 18 17 41 41 H 1.08998 * 109.47470 * 179.97438 * 20 18 17 42 42 H 1.08996 * 109.47409 * 300.00128 * 20 18 17 43 43 H 1.09003 * 109.47617 * 59.99127 * 21 18 17 44 44 H 1.08998 * 109.47727 * 180.02562 * 21 18 17 45 45 H 1.09003 * 109.46613 * 299.99807 * 21 18 17 46 46 H 1.08994 * 113.61261 * 270.81344 * 22 15 14 47 47 H 1.08995 * 113.61653 * 139.90399 * 22 15 14 48 48 H 1.07997 * 120.01850 * 179.71657 * 23 8 5 49 49 H 1.09003 * 109.46590 * 135.28165 * 25 24 23 50 50 H 0.96706 * 113.99803 * 60.00341 * 26 25 24 51 51 H 1.48505 * 110.00230 * 179.97438 * 27 25 24 52 52 H 1.48496 * 110.00028 * 301.31312 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0452 1.2093 0.0000 4 6 1.2870 2.3706 -0.0005 5 6 1.9119 3.6059 0.0000 6 8 1.1720 4.7430 0.0000 7 6 -0.2490 4.5924 0.0000 8 6 3.3130 3.6777 0.0005 9 6 3.9864 4.9876 0.0005 10 8 3.3277 6.0100 0.0005 11 7 5.3326 5.0534 0.0005 12 6 6.0023 6.3563 -0.0055 13 1 5.3886 7.1458 -0.4392 14 6 6.6262 6.7346 1.3482 15 6 7.8186 7.2943 0.5514 16 1 7.7031 8.3412 0.2704 17 6 9.1773 6.9966 1.1887 18 7 9.5072 8.0532 2.1545 19 1 9.4655 8.9518 1.6972 20 6 8.5431 8.0225 3.2624 21 6 10.8619 7.8327 2.6779 22 6 7.4336 6.3106 -0.5662 23 6 4.0678 2.5002 -0.0049 24 6 3.4352 1.2788 0.0003 25 6 4.2504 0.0113 0.0002 26 8 4.2151 -0.5776 -1.3013 27 14 6.0131 0.4065 0.4555 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8899 31 1 0.2087 2.3111 -0.0014 32 1 -0.7187 5.5760 -0.0005 33 1 -0.5561 4.0431 -0.8899 34 1 -0.5562 4.0431 0.8900 35 1 5.8579 4.2379 0.0002 36 1 6.0654 7.4964 1.8898 37 1 6.8802 5.8743 1.9675 38 1 9.1352 6.0358 1.7018 39 1 9.9425 6.9614 0.4133 40 1 8.5881 7.0519 3.7563 41 1 8.7881 8.8063 3.9792 42 1 7.5379 8.1863 2.8740 43 1 11.5773 7.8554 1.8559 44 1 11.1066 8.6164 3.3949 45 1 10.9069 6.8620 3.1719 46 1 7.9088 5.3343 -0.4712 47 1 7.5237 6.7307 -1.5678 48 1 5.1466 2.5500 -0.0092 49 1 3.8354 -0.6875 0.7265 50 1 4.5698 -0.0102 -1.9995 51 1 6.8274 -0.8354 0.4595 52 1 6.5801 1.3829 -0.5090 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_12297780.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:23:43 Heat of formation + Delta-G solvation = 25.883545 kcal Electronic energy + Delta-G solvation = -32552.909048 eV Core-core repulsion = 28218.780121 eV Total energy + Delta-G solvation = -4334.128927 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.200 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.26664 -42.00683 -40.68746 -40.02515 -38.90873 -38.50702 -37.10484 -34.66202 -32.30066 -31.84180 -29.97779 -29.43850 -29.04718 -28.21686 -26.64121 -26.20040 -25.87035 -24.81905 -23.57981 -22.57625 -21.57697 -20.95563 -20.05888 -19.05271 -18.84430 -18.22919 -18.03883 -17.85678 -17.38614 -17.26007 -16.93130 -16.64809 -16.40163 -16.29134 -16.03343 -15.87313 -15.74746 -15.74468 -15.39478 -14.80074 -14.45028 -14.24668 -14.04068 -13.84567 -13.62119 -13.50608 -13.45394 -13.36335 -13.24244 -13.21046 -13.01028 -12.76759 -12.74371 -12.59829 -12.58743 -12.29633 -12.19627 -11.78952 -11.73706 -11.69936 -11.41855 -10.90319 -10.54975 -10.07017 -9.94579 -9.22561 -4.93384 -0.29029 0.04344 1.09293 1.29625 1.51866 1.70304 2.03063 2.09236 2.10634 2.16526 2.57512 2.95648 3.02842 3.27124 3.39596 3.41236 3.45043 3.52914 3.59035 3.69846 3.77724 3.79893 3.87556 4.03029 4.07539 4.12614 4.19495 4.20451 4.21567 4.22504 4.22894 4.27294 4.39913 4.45335 4.50995 4.55634 4.59259 4.61752 4.71129 4.74235 4.77778 4.82168 4.83190 4.90099 4.91673 4.93547 5.01368 5.03061 5.12894 5.25843 5.28347 5.60881 5.97991 6.23292 6.52693 6.56035 7.25846 Molecular weight = 352.20amu Principal moments of inertia in cm(-1) A = 0.011591 B = 0.003065 C = 0.002564 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2414.998820 B = 9132.970705 C =10915.897046 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.315 6.315 3 C 0.208 3.792 4 C -0.316 4.316 5 C 0.214 3.786 6 O -0.302 6.302 7 C 0.011 3.989 8 C -0.228 4.228 9 C 0.566 3.434 10 O -0.565 6.565 11 N -0.708 5.708 12 C 0.096 3.904 13 H 0.083 0.917 14 C -0.152 4.152 15 C -0.116 4.116 16 H 0.124 0.876 17 C 0.011 3.989 18 N -0.370 5.370 19 H 0.437 0.563 20 C -0.058 4.058 21 C -0.046 4.046 22 C -0.130 4.130 23 C 0.005 3.995 24 C -0.198 4.198 25 C -0.092 4.092 26 O -0.551 6.551 27 Si 0.786 3.214 28 H 0.064 0.936 29 H 0.116 0.884 30 H 0.072 0.928 31 H 0.155 0.845 32 H 0.114 0.886 33 H 0.065 0.935 34 H 0.070 0.930 35 H 0.412 0.588 36 H 0.076 0.924 37 H 0.116 0.884 38 H 0.143 0.857 39 H 0.149 0.851 40 H 0.124 0.876 41 H 0.125 0.875 42 H 0.114 0.886 43 H 0.126 0.874 44 H 0.122 0.878 45 H 0.121 0.879 46 H 0.116 0.884 47 H 0.076 0.924 48 H 0.174 0.826 49 H 0.103 0.897 50 H 0.384 0.616 51 H -0.311 1.311 52 H -0.235 1.235 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 24.958 17.937 10.701 32.544 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.227 6.227 3 C 0.160 3.840 4 C -0.336 4.336 5 C 0.165 3.835 6 O -0.212 6.212 7 C -0.083 4.083 8 C -0.232 4.232 9 C 0.355 3.645 10 O -0.445 6.445 11 N -0.361 5.361 12 C -0.009 4.009 13 H 0.101 0.899 14 C -0.190 4.190 15 C -0.136 4.136 16 H 0.142 0.858 17 C -0.111 4.111 18 N 0.053 4.947 19 H 0.274 0.726 20 C -0.200 4.200 21 C -0.188 4.188 22 C -0.168 4.168 23 C -0.013 4.013 24 C -0.200 4.200 25 C -0.198 4.198 26 O -0.359 6.359 27 Si 0.688 3.312 28 H 0.083 0.917 29 H 0.134 0.866 30 H 0.090 0.910 31 H 0.172 0.828 32 H 0.132 0.868 33 H 0.084 0.916 34 H 0.089 0.911 35 H 0.250 0.750 36 H 0.095 0.905 37 H 0.134 0.866 38 H 0.161 0.839 39 H 0.167 0.833 40 H 0.143 0.857 41 H 0.143 0.857 42 H 0.133 0.867 43 H 0.144 0.856 44 H 0.141 0.859 45 H 0.139 0.861 46 H 0.134 0.866 47 H 0.095 0.905 48 H 0.191 0.809 49 H 0.121 0.879 50 H 0.233 0.767 51 H -0.239 1.239 52 H -0.160 1.160 Dipole moment (debyes) X Y Z Total from point charges 25.164 17.941 10.902 32.771 hybrid contribution -1.776 -0.545 -1.634 2.473 sum 23.388 17.396 9.268 30.586 Atomic orbital electron populations 1.23424 0.76291 1.05848 1.02495 1.86147 1.23433 1.26601 1.86519 1.19082 0.92184 0.83931 0.88769 1.21433 1.01971 0.91145 1.19013 1.19070 0.90815 0.85174 0.88483 1.86337 1.20441 1.28382 1.86082 1.23433 0.76927 1.05530 1.02427 1.19227 0.90408 0.94466 1.19077 1.17940 0.83204 0.87739 0.75656 1.90838 1.65912 1.36920 1.50821 1.45742 1.04832 1.10301 1.75250 1.22705 0.93234 0.85262 0.99652 0.89913 1.23908 0.96302 1.02525 0.96275 1.22717 0.92365 1.01823 0.96652 0.85768 1.23914 0.99262 0.93134 0.94752 1.44839 1.15379 1.18642 1.15798 0.72568 1.24284 0.95235 1.09835 0.90678 1.24122 0.80318 1.08942 1.05393 1.23356 0.92759 1.01515 0.99195 1.21023 1.00377 0.88480 0.91394 1.19576 0.90928 0.96539 1.12919 1.25443 1.12531 0.94209 0.87582 1.86652 1.85556 1.46217 1.17470 0.94452 0.69497 0.79920 0.87336 0.91702 0.86607 0.90978 0.82759 0.86819 0.91631 0.91095 0.74997 0.90490 0.86567 0.83871 0.83334 0.85704 0.85691 0.86716 0.85561 0.85918 0.86063 0.86623 0.90476 0.80948 0.87889 0.76748 1.23939 1.16035 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.22 9.80 113.37 1.11 0.89 16 2 O -0.32 3.25 9.80 -90.45 -0.89 2.37 16 3 C 0.21 -2.52 6.67 22.60 0.15 -2.37 16 4 C -0.32 4.09 8.01 22.42 0.18 4.27 16 5 C 0.21 -2.33 6.70 22.82 0.15 -2.18 16 6 O -0.30 2.48 8.56 -68.80 -0.59 1.89 16 7 C 0.01 -0.17 9.81 113.37 1.11 0.94 16 8 C -0.23 3.46 5.89 -20.00 -0.12 3.35 16 9 C 0.57 -9.01 7.76 86.62 0.67 -8.34 16 10 O -0.57 3.59 14.77 16.87 0.25 3.84 16 11 N -0.71 19.94 5.31 -443.42 -2.36 17.59 16 12 C 0.10 -3.25 4.21 45.52 0.19 -3.06 16 13 H 0.08 -2.12 7.50 -2.39 -0.02 -2.14 16 14 C -0.15 6.79 5.70 31.18 0.18 6.97 16 15 C -0.12 6.15 3.31 -10.21 -0.03 6.12 16 16 H 0.12 -6.71 8.10 -2.38 -0.02 -6.73 16 17 C 0.01 -0.71 4.57 86.30 0.39 -0.31 16 18 N -0.37 24.51 0.66 -948.86 -0.62 23.89 16 19 H 0.44 -30.34 8.41 -89.69 -0.75 -31.10 16 20 C -0.06 3.59 8.57 127.69 1.09 4.68 16 21 C -0.05 2.97 9.19 127.69 1.17 4.14 16 22 C -0.13 5.66 7.39 31.12 0.23 5.89 16 23 C 0.01 -0.11 8.14 22.50 0.18 0.07 16 24 C -0.20 3.21 5.27 -19.80 -0.10 3.11 16 25 C -0.09 1.49 2.37 71.23 0.17 1.66 16 26 O -0.55 6.34 12.88 -148.98 -1.92 4.43 16 27 Si 0.79 -19.01 30.25 68.60 2.08 -16.93 16 28 H 0.06 -1.14 7.65 -2.39 -0.02 -1.15 16 29 H 0.12 -2.11 8.14 -2.39 -0.02 -2.13 16 30 H 0.07 -1.37 7.65 -2.39 -0.02 -1.39 16 31 H 0.15 -2.50 4.50 -2.91 -0.01 -2.51 16 32 H 0.11 -1.95 8.14 -2.39 -0.02 -1.97 16 33 H 0.07 -1.12 7.66 -2.39 -0.02 -1.14 16 34 H 0.07 -1.28 7.66 -2.39 -0.02 -1.30 16 35 H 0.41 -14.24 6.73 -92.71 -0.62 -14.86 16 36 H 0.08 -3.23 7.19 -2.39 -0.02 -3.25 16 37 H 0.12 -5.60 7.90 -2.39 -0.02 -5.62 16 38 H 0.14 -9.14 7.80 -2.38 -0.02 -9.16 16 39 H 0.15 -9.54 8.09 -2.39 -0.02 -9.56 16 40 H 0.12 -7.72 8.11 -2.39 -0.02 -7.74 16 41 H 0.12 -7.70 8.14 -2.39 -0.02 -7.72 16 42 H 0.11 -6.73 5.13 -2.39 -0.01 -6.74 16 43 H 0.13 -8.13 8.11 -2.39 -0.02 -8.15 16 44 H 0.12 -7.77 8.14 -2.39 -0.02 -7.79 16 45 H 0.12 -7.72 8.14 -2.39 -0.02 -7.74 16 46 H 0.12 -5.43 8.07 -2.39 -0.02 -5.45 16 47 H 0.08 -3.06 8.14 -2.39 -0.02 -3.08 16 48 H 0.17 -5.14 3.17 -2.91 -0.01 -5.14 16 49 H 0.10 -1.43 7.82 -2.39 -0.02 -1.44 16 50 H 0.38 -7.22 8.70 -74.05 -0.64 -7.86 16 51 H -0.31 4.32 7.11 99.48 0.71 5.02 16 52 H -0.24 6.60 6.67 99.48 0.66 7.27 16 Total: 1.00 -89.34 404.13 1.62 -87.72 By element: Atomic # 1 Polarization: -149.54 SS G_CDS: -1.06 Total: -150.60 kcal Atomic # 6 Polarization: 19.08 SS G_CDS: 6.74 Total: 25.82 kcal Atomic # 7 Polarization: 44.46 SS G_CDS: -2.98 Total: 41.48 kcal Atomic # 8 Polarization: 15.66 SS G_CDS: -3.14 Total: 12.52 kcal Atomic # 14 Polarization: -19.01 SS G_CDS: 2.08 Total: -16.93 kcal Total: -89.34 1.62 -87.72 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_12297780.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.601 kcal (2) G-P(sol) polarization free energy of solvation -89.342 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.259 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.625 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -87.717 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.884 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds