Wall clock time and date at job start Sun Mar 7 2021 06:24:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 H 1.00898 * 109.46882 * 2 1 4 4 C 1.46900 * 109.47634 * 120.00358 * 2 1 3 5 5 C 1.46897 * 109.46953 * 240.00722 * 2 1 3 6 6 C 1.53003 * 109.47248 * 174.99734 * 5 2 1 7 7 H 1.08996 * 112.84769 * 316.19350 * 6 5 2 8 8 C 1.53788 * 113.69017 * 87.46186 * 6 5 2 9 9 C 1.53776 * 87.08182 * 139.99038 * 8 6 5 10 10 H 1.09006 * 113.69179 * 89.12568 * 9 8 6 11 11 N 1.46500 * 113.61850 * 220.01891 * 9 8 6 12 12 C 1.34780 * 119.99775 * 252.50225 * 11 9 8 13 13 O 1.21697 * 120.00006 * 359.97438 * 12 11 9 14 14 C 1.46428 * 119.99640 * 180.02562 * 12 11 9 15 15 C 1.34811 * 119.99662 * 179.97438 * 14 12 11 16 16 C 1.47208 * 119.99605 * 179.97438 * 15 14 12 17 17 C 1.39835 * 120.16536 * 179.97438 * 16 15 14 18 18 C 1.37895 * 119.82663 * 179.97438 * 17 16 15 19 19 C 1.38404 * 120.16863 * 359.97438 * 18 17 16 20 20 C 1.50698 * 119.82755 * 179.97438 * 19 18 17 21 21 O 1.42899 * 109.47144 * 120.02544 * 20 19 18 22 22 Si 1.86298 * 109.47140 * 0.02642 * 20 19 18 23 23 C 1.38409 * 120.34400 * 0.02562 * 19 18 17 24 24 C 1.37891 * 120.17151 * 359.97438 * 23 19 18 25 25 C 1.53778 * 113.61421 * 184.99355 * 6 5 2 26 26 H 1.08999 * 109.47253 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.46430 * 299.99675 * 1 2 3 28 28 H 1.08992 * 109.47457 * 59.99632 * 1 2 3 29 29 H 1.09002 * 109.47134 * 179.97438 * 4 2 1 30 30 H 1.08998 * 109.46905 * 300.00201 * 4 2 1 31 31 H 1.08995 * 109.47001 * 59.99724 * 4 2 1 32 32 H 1.08999 * 109.47682 * 54.99470 * 5 2 1 33 33 H 1.09002 * 109.46800 * 294.99484 * 5 2 1 34 34 H 1.09004 * 113.61037 * 25.44641 * 8 6 5 35 35 H 1.08994 * 113.61326 * 254.54476 * 8 6 5 36 36 H 0.96991 * 119.99806 * 72.49377 * 11 9 8 37 37 H 1.07994 * 120.00148 * 359.97438 * 14 12 11 38 38 H 1.07994 * 120.00191 * 359.97438 * 15 14 12 39 39 H 1.07999 * 120.09098 * 359.70488 * 17 16 15 40 40 H 1.08000 * 119.91543 * 180.02562 * 18 17 16 41 41 H 1.09002 * 109.47099 * 240.02192 * 20 19 18 42 42 H 0.96703 * 113.99873 * 300.00609 * 21 20 19 43 43 H 1.48495 * 110.00061 * 179.97438 * 22 20 19 44 44 H 1.48503 * 109.99927 * 301.31722 * 22 20 19 45 45 H 1.07996 * 119.91059 * 180.02562 * 23 19 18 46 46 H 1.07995 * 120.08503 * 180.02562 * 24 23 19 47 47 H 1.09001 * 113.61053 * 105.38716 * 25 6 5 48 48 H 1.08994 * 113.69494 * 334.49652 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9588 -0.6925 1.1994 5 6 1.9586 -0.6923 -1.1995 6 6 3.4835 -0.5843 -1.2640 7 1 3.8473 0.4158 -1.0286 8 6 4.2149 -1.7014 -0.5010 9 6 5.2171 -1.7338 -1.6668 10 1 6.0556 -1.0484 -1.5428 11 7 5.6383 -3.0860 -2.0413 12 6 6.8813 -3.5120 -1.7412 13 8 7.6539 -2.7732 -1.1595 14 6 7.3025 -4.8634 -2.1160 15 6 8.5460 -5.2893 -1.8163 16 6 8.9692 -6.6480 -2.1926 17 6 10.2584 -7.0932 -1.8839 18 6 10.6473 -8.3676 -2.2393 19 6 9.7652 -9.2054 -2.8993 20 6 10.1986 -10.5964 -3.2845 21 8 9.3454 -11.5531 -2.6531 22 14 11.9568 -10.8738 -2.7345 23 6 8.4876 -8.7720 -3.2083 24 6 8.0839 -7.5004 -2.8596 25 6 4.0889 -1.1736 -2.5490 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3632 0.5138 0.8901 28 1 -0.3634 0.5138 -0.8899 29 1 3.0488 -0.6929 1.1990 30 1 1.5955 -0.1788 2.0894 31 1 1.5955 -1.7202 1.1993 32 1 1.5240 -0.2328 -2.0872 33 1 1.6703 -1.7426 -1.1559 34 1 3.6312 -2.6166 -0.4015 35 1 4.6520 -1.3723 0.4417 36 1 5.0227 -3.6747 -2.5051 37 1 6.6171 -5.5188 -2.6326 38 1 9.2316 -4.6336 -1.3001 39 1 10.9491 -6.4393 -1.3724 40 1 11.6425 -8.7131 -2.0012 41 1 10.1341 -10.7104 -4.3666 42 1 9.3524 -11.5092 -1.6871 43 1 12.3959 -12.2423 -3.1080 44 1 12.8496 -9.8651 -3.3595 45 1 7.8049 -9.4317 -3.7231 46 1 7.0865 -7.1638 -3.1010 47 1 4.4245 -0.4183 -3.2597 48 1 3.4718 -1.9444 -3.0104 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_12360594.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:24:34 Heat of formation + Delta-G solvation = 105.560973 kcal Electronic energy + Delta-G solvation = -25377.063729 eV Core-core repulsion = 21711.065737 eV Total energy + Delta-G solvation = -3665.997992 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.186 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.23049 -40.99036 -40.53210 -39.08369 -37.79381 -35.11430 -34.66515 -32.10336 -31.48443 -30.09583 -29.49421 -27.32534 -26.69708 -25.84071 -24.58745 -23.99788 -23.11611 -21.93056 -21.24811 -20.26972 -19.09942 -18.64169 -18.40313 -18.02331 -17.44955 -16.98413 -16.85739 -16.40105 -16.13298 -16.06376 -15.88956 -15.85054 -15.29236 -14.78452 -14.59174 -14.51176 -14.16333 -13.92178 -13.82830 -13.58732 -13.52641 -13.50886 -13.40371 -13.28505 -13.07549 -12.92883 -12.84084 -12.35209 -12.24780 -12.10597 -11.78656 -11.76681 -11.49713 -11.39129 -11.07455 -10.48452 -10.09618 -10.01550 -9.26818 -5.06162 -0.58846 0.36346 0.84833 1.04128 1.26361 1.57062 1.92571 2.16175 2.20436 2.78536 2.90176 2.97468 3.21379 3.35313 3.45372 3.47383 3.55333 3.67446 3.73381 3.74740 3.79791 3.92728 3.96869 4.12947 4.16371 4.17738 4.21963 4.31830 4.34649 4.40991 4.44168 4.46327 4.48739 4.68207 4.70991 4.75658 4.77463 4.84400 4.85075 4.88973 4.93351 4.94707 5.05974 5.06147 5.11564 5.20410 5.35527 5.44843 5.54827 5.57263 5.87124 6.49798 6.71996 7.18854 Molecular weight = 318.19amu Principal moments of inertia in cm(-1) A = 0.029953 B = 0.001859 C = 0.001811 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 934.582838 B =15059.451690 C =15455.204172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.370 5.370 3 H 0.438 0.562 4 C -0.057 4.057 5 C 0.012 3.988 6 C -0.116 4.116 7 H 0.125 0.875 8 C -0.151 4.151 9 C 0.093 3.907 10 H 0.083 0.917 11 N -0.703 5.703 12 C 0.543 3.457 13 O -0.593 6.593 14 C -0.214 4.214 15 C -0.021 4.021 16 C -0.083 4.083 17 C -0.097 4.097 18 C -0.127 4.127 19 C -0.112 4.112 20 C -0.070 4.070 21 O -0.553 6.553 22 Si 0.767 3.233 23 C -0.106 4.106 24 C -0.098 4.098 25 C -0.128 4.128 26 H 0.119 0.881 27 H 0.124 0.876 28 H 0.127 0.873 29 H 0.114 0.886 30 H 0.126 0.874 31 H 0.122 0.878 32 H 0.149 0.851 33 H 0.140 0.860 34 H 0.111 0.889 35 H 0.076 0.924 36 H 0.419 0.581 37 H 0.160 0.840 38 H 0.123 0.877 39 H 0.144 0.856 40 H 0.140 0.860 41 H 0.109 0.891 42 H 0.396 0.604 43 H -0.305 1.305 44 H -0.288 1.288 45 H 0.134 0.866 46 H 0.154 0.846 47 H 0.076 0.924 48 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -30.365 22.953 8.891 39.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.053 4.947 3 H 0.275 0.725 4 C -0.199 4.199 5 C -0.110 4.110 6 C -0.135 4.135 7 H 0.143 0.857 8 C -0.189 4.189 9 C -0.012 4.012 10 H 0.101 0.899 11 N -0.354 5.354 12 C 0.333 3.667 13 O -0.476 6.476 14 C -0.234 4.234 15 C -0.041 4.041 16 C -0.083 4.083 17 C -0.115 4.115 18 C -0.144 4.144 19 C -0.113 4.113 20 C -0.181 4.181 21 O -0.362 6.362 22 Si 0.674 3.326 23 C -0.123 4.123 24 C -0.115 4.115 25 C -0.167 4.167 26 H 0.138 0.862 27 H 0.142 0.858 28 H 0.145 0.855 29 H 0.132 0.868 30 H 0.145 0.855 31 H 0.141 0.859 32 H 0.167 0.833 33 H 0.158 0.842 34 H 0.130 0.870 35 H 0.095 0.905 36 H 0.257 0.743 37 H 0.177 0.823 38 H 0.141 0.859 39 H 0.162 0.838 40 H 0.158 0.842 41 H 0.126 0.874 42 H 0.246 0.754 43 H -0.233 1.233 44 H -0.215 1.215 45 H 0.152 0.848 46 H 0.172 0.828 47 H 0.095 0.905 48 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -29.271 22.890 8.443 38.105 hybrid contribution 0.318 -0.023 -0.820 0.879 sum -28.953 22.867 7.623 37.673 Atomic orbital electron populations 1.24128 0.75365 1.09535 1.09747 1.44840 1.16045 1.19295 1.14497 0.72499 1.24271 1.05537 1.02719 0.87422 1.23890 0.94710 1.03689 0.88670 1.22689 0.92864 1.00693 0.97266 0.85716 1.23847 0.97381 1.00027 0.97682 1.22704 0.96656 0.83539 0.98329 0.89921 1.45743 1.13589 1.16374 1.59652 1.18659 0.82338 0.87604 0.78063 1.90832 1.54401 1.58292 1.44030 1.23067 0.98500 0.95789 1.06066 1.22380 0.96090 0.92822 0.92806 1.19150 0.94780 0.93808 1.00597 1.21599 0.95638 0.95904 0.98392 1.21150 0.99685 0.94495 0.99084 1.20582 0.95397 0.96300 0.98997 1.25065 1.06010 0.86418 1.00596 1.86480 1.67499 1.55998 1.26177 0.93817 0.72575 0.75941 0.90225 1.21120 0.95657 0.96139 0.99434 1.21667 1.00271 0.93000 0.96586 1.23329 0.95650 1.01231 0.96445 0.86202 0.85794 0.85455 0.86752 0.85539 0.85945 0.83278 0.84190 0.87028 0.90515 0.74343 0.82262 0.85878 0.83831 0.84234 0.87396 0.75409 1.23308 1.21544 0.84809 0.82834 0.90526 0.86767 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.96 9.19 127.69 1.17 4.13 16 2 N -0.37 24.44 0.66 -948.86 -0.62 23.82 16 3 H 0.44 -30.35 8.40 -89.70 -0.75 -31.10 16 4 C -0.06 3.52 8.57 127.69 1.09 4.62 16 5 C 0.01 -0.77 4.57 86.30 0.39 -0.37 16 6 C -0.12 6.12 3.30 -10.26 -0.03 6.08 16 7 H 0.12 -6.73 8.09 -2.39 -0.02 -6.75 16 8 C -0.15 6.75 5.69 31.12 0.18 6.93 16 9 C 0.09 -3.18 4.24 45.52 0.19 -2.98 16 10 H 0.08 -2.15 7.46 -2.38 -0.02 -2.17 16 11 N -0.70 20.92 5.35 -444.25 -2.38 18.54 16 12 C 0.54 -10.36 7.74 86.37 0.67 -9.69 16 13 O -0.59 5.27 15.83 -4.34 -0.07 5.20 16 14 C -0.21 4.49 9.41 23.62 0.22 4.71 16 15 C -0.02 0.35 9.46 23.84 0.23 0.58 16 16 C -0.08 1.32 5.87 -20.15 -0.12 1.21 16 17 C -0.10 1.46 9.80 22.58 0.22 1.69 16 18 C -0.13 1.84 8.65 22.23 0.19 2.03 16 19 C -0.11 1.54 5.40 -19.78 -0.11 1.43 16 20 C -0.07 0.89 2.82 71.24 0.20 1.09 16 21 O -0.55 6.72 12.76 -148.98 -1.90 4.81 16 22 Si 0.77 -9.63 29.77 68.60 2.04 -7.59 16 23 C -0.11 1.58 9.59 22.23 0.21 1.79 16 24 C -0.10 1.73 9.41 22.57 0.21 1.94 16 25 C -0.13 5.59 7.39 31.12 0.23 5.82 16 26 H 0.12 -7.58 8.14 -2.39 -0.02 -7.60 16 27 H 0.12 -7.85 8.14 -2.39 -0.02 -7.87 16 28 H 0.13 -8.19 8.11 -2.39 -0.02 -8.21 16 29 H 0.11 -6.69 5.13 -2.39 -0.01 -6.70 16 30 H 0.13 -7.79 8.14 -2.39 -0.02 -7.81 16 31 H 0.12 -7.50 8.11 -2.39 -0.02 -7.52 16 32 H 0.15 -9.54 8.09 -2.39 -0.02 -9.56 16 33 H 0.14 -8.82 7.79 -2.39 -0.02 -8.84 16 34 H 0.11 -5.30 7.90 -2.39 -0.02 -5.32 16 35 H 0.08 -3.22 7.19 -2.39 -0.02 -3.24 16 36 H 0.42 -15.19 8.71 -92.71 -0.81 -16.00 16 37 H 0.16 -4.43 6.07 -2.91 -0.02 -4.45 16 38 H 0.12 -1.72 7.52 -2.91 -0.02 -1.74 16 39 H 0.14 -2.57 8.06 -2.91 -0.02 -2.60 16 40 H 0.14 -2.39 4.85 -2.91 -0.01 -2.41 16 41 H 0.11 -1.23 7.96 -2.39 -0.02 -1.25 16 42 H 0.40 -7.98 8.70 -74.06 -0.64 -8.62 16 43 H -0.30 1.16 7.11 99.48 0.71 1.87 16 44 H -0.29 2.17 7.11 99.48 0.71 2.88 16 45 H 0.13 -2.14 8.06 -2.91 -0.02 -2.16 16 46 H 0.15 -3.69 6.17 -2.91 -0.02 -3.71 16 47 H 0.08 -3.04 8.14 -2.39 -0.02 -3.06 16 48 H 0.11 -5.33 8.08 -2.39 -0.02 -5.34 16 Total: 1.00 -84.52 382.72 1.04 -83.48 By element: Atomic # 1 Polarization: -158.09 SS G_CDS: -1.19 Total: -159.28 kcal Atomic # 6 Polarization: 25.84 SS G_CDS: 5.16 Total: 31.01 kcal Atomic # 7 Polarization: 45.36 SS G_CDS: -3.00 Total: 42.36 kcal Atomic # 8 Polarization: 11.99 SS G_CDS: -1.97 Total: 10.02 kcal Atomic # 14 Polarization: -9.63 SS G_CDS: 2.04 Total: -7.59 kcal Total: -84.52 1.04 -83.48 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_12360594.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 189.042 kcal (2) G-P(sol) polarization free energy of solvation -84.524 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 104.518 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.043 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -83.481 kcal (6) G-S(sol) free energy of system = (1) + (5) 105.561 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds