Wall clock time and date at job start Sun Mar 7 2021 06:24:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 H 1.00904 * 109.46480 * 2 1 4 4 C 1.46892 * 109.47046 * 119.99682 * 2 1 3 5 5 C 1.46900 * 109.47348 * 239.99973 * 2 1 3 6 6 C 1.53003 * 109.47021 * 64.99741 * 5 2 1 7 7 H 1.09002 * 112.85017 * 314.66697 * 6 5 2 8 8 C 1.53786 * 113.61503 * 85.86315 * 6 5 2 9 9 C 1.54049 * 86.98426 * 140.01654 * 8 6 5 10 10 H 1.09003 * 113.61268 * 89.11946 * 9 8 6 11 11 N 1.46497 * 113.61947 * 220.02008 * 9 8 6 12 12 C 1.34773 * 120.00221 * 252.49496 * 11 9 8 13 13 O 1.21565 * 120.00103 * 0.02562 * 12 11 9 14 14 C 1.47697 * 120.00063 * 179.97438 * 12 11 9 15 15 C 1.39806 * 120.15689 * 179.73133 * 14 12 11 16 16 F 1.35109 * 120.08141 * 359.97438 * 15 14 12 17 17 C 1.38317 * 119.83411 * 179.72277 * 15 14 12 18 18 C 1.38184 * 120.14163 * 0.57508 * 17 15 14 19 19 C 1.50699 * 119.83791 * 179.70077 * 18 17 15 20 20 O 1.42900 * 109.47226 * 254.97217 * 19 18 17 21 21 Si 1.86293 * 109.47456 * 14.97481 * 19 18 17 22 22 C 1.38651 * 120.31468 * 359.67334 * 18 17 15 23 23 F 1.35105 * 119.91470 * 180.02562 * 22 18 17 24 24 C 1.38070 * 120.16895 * 0.04865 * 22 18 17 25 25 C 1.53781 * 113.61337 * 183.47109 * 6 5 2 26 26 H 1.08998 * 109.47669 * 300.00362 * 1 2 3 27 27 H 1.09004 * 109.47130 * 60.00360 * 1 2 3 28 28 H 1.09001 * 109.46898 * 179.97438 * 1 2 3 29 29 H 1.09005 * 109.47278 * 180.02562 * 4 2 1 30 30 H 1.08999 * 109.47580 * 300.00318 * 4 2 1 31 31 H 1.09005 * 109.47299 * 60.00228 * 4 2 1 32 32 H 1.09000 * 109.47121 * 304.99822 * 5 2 1 33 33 H 1.08997 * 109.47113 * 184.99661 * 5 2 1 34 34 H 1.08992 * 113.61675 * 254.61398 * 8 6 5 35 35 H 1.09000 * 113.60973 * 25.51686 * 8 6 5 36 36 H 0.97001 * 119.99862 * 72.50056 * 11 9 8 37 37 H 1.08000 * 119.92666 * 180.24774 * 17 15 14 38 38 H 1.09006 * 109.47001 * 134.97537 * 19 18 17 39 39 H 0.96696 * 114.00299 * 180.02562 * 20 19 18 40 40 H 1.48494 * 110.00012 * 299.99962 * 21 19 18 41 41 H 1.48509 * 109.99856 * 61.31970 * 21 19 18 42 42 H 1.08000 * 120.07098 * 179.97438 * 24 22 18 43 43 H 1.08999 * 113.61567 * 334.48261 * 25 6 5 44 44 H 1.09000 * 113.61379 * 105.30384 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8052 0.9514 0.0000 4 6 1.9586 -0.6924 1.1994 5 6 1.9587 -0.6925 -1.1994 6 6 1.5539 0.0977 -2.4455 7 1 0.5158 0.4288 -2.4180 8 6 2.5463 1.2119 -2.8178 9 6 2.3228 0.8081 -4.2875 10 1 1.4950 1.3335 -4.7636 11 7 3.5464 0.8234 -5.0929 12 6 3.7383 1.7933 -6.0088 13 8 2.8963 2.6559 -6.1662 14 6 4.9722 1.8090 -6.8204 15 6 5.1721 2.8104 -7.7753 16 9 4.2362 3.7674 -7.9591 17 6 6.3327 2.8220 -8.5277 18 6 7.2876 1.8400 -8.3454 19 6 8.5465 1.8554 -9.1736 20 8 8.4716 0.8370 -10.1732 21 14 8.7302 3.5180 -9.9936 22 6 7.0933 0.8410 -7.4037 23 9 8.0325 -0.1148 -7.2318 24 6 5.9422 0.8203 -6.6416 25 6 1.9469 -0.5883 -3.7645 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 3.0487 -0.6920 1.1997 30 1 1.5953 -0.1786 2.0894 31 1 1.5953 -1.7201 1.1995 32 1 1.5241 -1.6911 -1.2453 33 1 3.0450 -0.7706 -1.1558 34 1 2.1881 2.2133 -2.5793 35 1 3.5610 1.0289 -2.4642 36 1 4.2185 0.1353 -4.9671 37 1 6.4904 3.5972 -9.2629 38 1 9.4069 1.6704 -8.5303 39 1 9.2502 0.7885 -10.7445 40 1 7.5635 3.7821 -10.8734 41 1 8.8414 4.5826 -8.9641 42 1 5.7922 0.0412 -5.9088 43 1 2.7980 -1.2626 -3.6694 44 1 1.1053 -1.0405 -4.2892 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_12360598.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:24:39 Heat of formation + Delta-G solvation = 38.211838 kcal Electronic energy + Delta-G solvation = -28038.884315 eV Core-core repulsion = 23714.821653 eV Total energy + Delta-G solvation = -4324.062661 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.151 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -50.86911 -50.80223 -44.53875 -42.54736 -41.30156 -40.28284 -38.36904 -36.19537 -34.27177 -32.25216 -32.22326 -31.94709 -28.96487 -28.70649 -28.00019 -26.00769 -25.27525 -24.24428 -22.94408 -22.68735 -21.74876 -20.59732 -20.20771 -19.75897 -19.44373 -19.33017 -19.17409 -18.53411 -18.15370 -17.94268 -17.91497 -17.30464 -17.10779 -17.03172 -16.55569 -16.48119 -16.35945 -16.26602 -16.09169 -16.02702 -15.85488 -15.73850 -15.49052 -15.33843 -15.14165 -14.84439 -14.61164 -14.54928 -14.32533 -14.12390 -13.86664 -13.58536 -13.33508 -13.10968 -12.72084 -12.12929 -11.52592 -11.37989 -11.18739 -10.63079 -5.72314 -1.67509 -1.51579 -1.15651 0.40193 0.41936 0.45615 0.49317 0.65905 0.74733 0.90266 1.16650 1.23480 1.30064 1.35506 1.56741 1.64120 1.67346 1.75362 1.84765 1.92081 1.96720 2.04107 2.07814 2.12867 2.18625 2.19979 2.26193 2.32820 2.42308 2.52272 2.82027 2.85024 2.86751 2.93426 2.96535 3.12807 3.19865 3.26662 3.46175 3.49919 3.50576 3.68878 3.87078 3.87817 4.06350 4.53214 5.09729 5.79530 5.92064 Molecular weight = 328.15amu Principal moments of inertia in cm(-1) A = 0.022572 B = 0.002614 C = 0.002447 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1240.196483 B =10708.680060 C =11438.646612 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 N -0.387 5.387 3 H 0.428 0.572 4 C -0.048 4.048 5 C 0.002 3.998 6 C -0.146 4.146 7 H 0.119 0.881 8 C -0.162 4.162 9 C 0.130 3.870 10 H 0.126 0.874 11 N -0.719 5.719 12 C 0.567 3.433 13 O -0.507 6.507 14 C -0.150 4.150 15 C 0.164 3.836 16 F -0.103 7.103 17 C -0.138 4.138 18 C -0.046 4.046 19 C -0.081 4.081 20 O -0.540 6.540 21 Si 0.694 3.306 22 C 0.113 3.887 23 F -0.118 7.118 24 C -0.093 4.093 25 C -0.132 4.132 26 H 0.125 0.875 27 H 0.124 0.876 28 H 0.123 0.877 29 H 0.123 0.877 30 H 0.125 0.875 31 H 0.122 0.878 32 H 0.133 0.867 33 H 0.131 0.869 34 H 0.087 0.913 35 H 0.097 0.903 36 H 0.403 0.597 37 H 0.155 0.845 38 H 0.086 0.914 39 H 0.391 0.609 40 H -0.244 1.244 41 H -0.248 1.248 42 H 0.151 0.849 43 H 0.099 0.901 44 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.319 -9.363 26.655 30.077 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 N 0.037 4.963 3 H 0.262 0.738 4 C -0.190 4.190 5 C -0.119 4.119 6 C -0.165 4.165 7 H 0.137 0.863 8 C -0.200 4.200 9 C 0.025 3.975 10 H 0.144 0.856 11 N -0.372 5.372 12 C 0.354 3.646 13 O -0.381 6.381 14 C -0.154 4.154 15 C 0.143 3.857 16 F -0.081 7.081 17 C -0.156 4.156 18 C -0.047 4.047 19 C -0.191 4.191 20 O -0.348 6.348 21 Si 0.594 3.406 22 C 0.093 3.907 23 F -0.096 7.096 24 C -0.113 4.113 25 C -0.171 4.171 26 H 0.144 0.856 27 H 0.143 0.857 28 H 0.142 0.858 29 H 0.141 0.859 30 H 0.143 0.857 31 H 0.141 0.859 32 H 0.151 0.849 33 H 0.149 0.851 34 H 0.106 0.894 35 H 0.115 0.885 36 H 0.240 0.760 37 H 0.172 0.828 38 H 0.104 0.896 39 H 0.240 0.760 40 H -0.168 1.168 41 H -0.172 1.172 42 H 0.169 0.831 43 H 0.117 0.883 44 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -11.957 -8.292 26.717 30.422 hybrid contribution 0.343 -0.496 0.477 0.769 sum -11.614 -8.788 27.194 30.848 Atomic orbital electron populations 1.24205 0.75855 1.09751 1.09641 1.45027 1.16474 1.19118 1.15639 0.73768 1.24148 1.05644 1.02483 0.86685 1.24068 1.04988 0.99925 0.82943 1.23018 1.02065 0.98483 0.92965 0.86267 1.23865 0.99358 0.98965 0.97846 1.22406 0.88907 0.96633 0.89545 0.85583 1.45742 1.22003 1.30166 1.39277 1.17856 0.85603 0.81710 0.79418 1.90916 1.43952 1.36535 1.66732 1.19705 0.97063 0.97963 1.00717 1.17444 0.86851 0.86795 0.94625 1.91668 1.62662 1.60247 1.93529 1.20992 0.92515 1.00835 1.01270 1.19508 0.95950 0.93584 0.95705 1.24678 0.95565 1.04829 0.94027 1.86471 1.46401 1.55143 1.46740 0.94436 0.88103 0.73786 0.84292 1.17182 0.87895 0.88161 0.97439 1.91591 1.62813 1.60957 1.94264 1.21064 0.91909 0.98536 0.99750 1.23374 1.03416 0.97087 0.93178 0.85648 0.85748 0.85828 0.85864 0.85655 0.85900 0.84918 0.85070 0.89403 0.88482 0.76042 0.82815 0.89606 0.75954 1.16843 1.17210 0.83142 0.88260 0.88718 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.66 8.97 60.06 0.54 2.20 16 2 N -0.39 12.70 0.66 -251.26 -0.17 12.53 16 3 H 0.43 -14.50 8.44 -39.29 -0.33 -14.83 16 4 C -0.05 1.53 9.19 60.06 0.55 2.08 16 5 C 0.00 -0.07 4.47 -3.82 -0.02 -0.09 16 6 C -0.15 3.89 3.55 -89.80 -0.32 3.57 16 7 H 0.12 -3.26 6.13 -51.93 -0.32 -3.58 16 8 C -0.16 3.69 7.45 -25.77 -0.19 3.50 16 9 C 0.13 -2.40 4.25 -66.98 -0.28 -2.69 16 10 H 0.13 -1.98 7.47 -51.93 -0.39 -2.36 16 11 N -0.72 11.15 5.31 -53.87 -0.29 10.86 16 12 C 0.57 -5.62 7.77 -12.40 -0.10 -5.71 16 13 O -0.51 2.87 14.94 5.31 0.08 2.95 16 14 C -0.15 1.37 5.88 -104.92 -0.62 0.75 16 15 C 0.16 -1.06 7.28 -38.97 -0.28 -1.35 16 16 F -0.10 0.42 15.55 2.25 0.04 0.46 16 17 C -0.14 0.95 8.62 -39.57 -0.34 0.61 16 18 C -0.05 0.34 5.30 -104.49 -0.55 -0.21 16 19 C -0.08 0.70 2.43 36.01 0.09 0.79 16 20 O -0.54 4.33 12.86 -35.23 -0.45 3.88 16 21 Si 0.69 -6.43 30.18 -169.99 -5.13 -11.56 16 22 C 0.11 -0.96 7.23 -39.49 -0.29 -1.25 16 23 F -0.12 0.90 16.73 2.25 0.04 0.94 16 24 C -0.09 1.04 9.51 -39.12 -0.37 0.67 16 25 C -0.13 2.96 7.39 -25.92 -0.19 2.77 16 26 H 0.13 -3.94 8.14 -51.93 -0.42 -4.36 16 27 H 0.12 -3.84 6.11 -51.93 -0.32 -4.16 16 28 H 0.12 -3.85 8.11 -51.93 -0.42 -4.28 16 29 H 0.12 -3.91 8.11 -51.93 -0.42 -4.33 16 30 H 0.12 -3.97 8.14 -51.93 -0.42 -4.39 16 31 H 0.12 -3.87 8.14 -51.93 -0.42 -4.29 16 32 H 0.13 -4.09 8.09 -51.93 -0.42 -4.51 16 33 H 0.13 -4.07 7.82 -51.93 -0.41 -4.47 16 34 H 0.09 -1.91 8.14 -51.93 -0.42 -2.33 16 35 H 0.10 -2.29 7.92 -51.93 -0.41 -2.70 16 36 H 0.40 -7.33 6.76 -40.82 -0.28 -7.60 16 37 H 0.15 -1.09 4.87 -52.49 -0.26 -1.34 16 38 H 0.09 -0.87 7.89 -51.93 -0.41 -1.28 16 39 H 0.39 -4.96 8.74 45.56 0.40 -4.56 16 40 H -0.24 1.57 6.74 56.52 0.38 1.95 16 41 H -0.25 1.73 7.11 56.52 0.40 2.13 16 42 H 0.15 -2.32 6.41 -52.49 -0.34 -2.66 16 43 H 0.10 -2.31 8.08 -51.93 -0.42 -2.73 16 44 H 0.09 -2.00 8.14 -51.93 -0.42 -2.42 16 LS Contribution 361.03 15.07 5.44 5.44 Total: 1.00 -39.10 361.03 -8.88 -47.98 By element: Atomic # 1 Polarization: -73.06 SS G_CDS: -6.06 Total: -79.13 kcal Atomic # 6 Polarization: 8.02 SS G_CDS: -2.38 Total: 5.65 kcal Atomic # 7 Polarization: 23.84 SS G_CDS: -0.45 Total: 23.39 kcal Atomic # 8 Polarization: 7.20 SS G_CDS: -0.37 Total: 6.83 kcal Atomic # 9 Polarization: 1.32 SS G_CDS: 0.07 Total: 1.39 kcal Atomic # 14 Polarization: -6.43 SS G_CDS: -5.13 Total: -11.56 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -39.10 -8.88 -47.98 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_12360598.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.197 kcal (2) G-P(sol) polarization free energy of solvation -39.102 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.095 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.985 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.212 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds