Wall clock time and date at job start Sun Mar 7 2021 06:24:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 H 1.00904 * 109.46480 * 2 1 4 4 C 1.46892 * 109.47046 * 119.99682 * 2 1 3 5 5 C 1.46900 * 109.47348 * 239.99973 * 2 1 3 6 6 C 1.53003 * 109.47021 * 64.99741 * 5 2 1 7 7 H 1.09002 * 112.85017 * 314.66697 * 6 5 2 8 8 C 1.53786 * 113.61503 * 85.86315 * 6 5 2 9 9 C 1.54049 * 86.98426 * 140.01654 * 8 6 5 10 10 H 1.09003 * 113.61268 * 89.11946 * 9 8 6 11 11 N 1.46497 * 113.61947 * 220.02008 * 9 8 6 12 12 C 1.34773 * 120.00221 * 252.49496 * 11 9 8 13 13 O 1.21565 * 120.00103 * 0.02562 * 12 11 9 14 14 C 1.47697 * 120.00063 * 179.97438 * 12 11 9 15 15 C 1.39806 * 120.15689 * 179.73133 * 14 12 11 16 16 F 1.35109 * 120.08141 * 359.97438 * 15 14 12 17 17 C 1.38317 * 119.83411 * 179.72277 * 15 14 12 18 18 C 1.38184 * 120.14163 * 0.57508 * 17 15 14 19 19 C 1.50699 * 119.83791 * 179.70077 * 18 17 15 20 20 O 1.42900 * 109.47226 * 254.97217 * 19 18 17 21 21 Si 1.86293 * 109.47456 * 14.97481 * 19 18 17 22 22 C 1.38651 * 120.31468 * 359.67334 * 18 17 15 23 23 F 1.35105 * 119.91470 * 180.02562 * 22 18 17 24 24 C 1.38070 * 120.16895 * 0.04865 * 22 18 17 25 25 C 1.53781 * 113.61337 * 183.47109 * 6 5 2 26 26 H 1.08998 * 109.47669 * 300.00362 * 1 2 3 27 27 H 1.09004 * 109.47130 * 60.00360 * 1 2 3 28 28 H 1.09001 * 109.46898 * 179.97438 * 1 2 3 29 29 H 1.09005 * 109.47278 * 180.02562 * 4 2 1 30 30 H 1.08999 * 109.47580 * 300.00318 * 4 2 1 31 31 H 1.09005 * 109.47299 * 60.00228 * 4 2 1 32 32 H 1.09000 * 109.47121 * 304.99822 * 5 2 1 33 33 H 1.08997 * 109.47113 * 184.99661 * 5 2 1 34 34 H 1.08992 * 113.61675 * 254.61398 * 8 6 5 35 35 H 1.09000 * 113.60973 * 25.51686 * 8 6 5 36 36 H 0.97001 * 119.99862 * 72.50056 * 11 9 8 37 37 H 1.08000 * 119.92666 * 180.24774 * 17 15 14 38 38 H 1.09006 * 109.47001 * 134.97537 * 19 18 17 39 39 H 0.96696 * 114.00299 * 180.02562 * 20 19 18 40 40 H 1.48494 * 110.00012 * 299.99962 * 21 19 18 41 41 H 1.48509 * 109.99856 * 61.31970 * 21 19 18 42 42 H 1.08000 * 120.07098 * 179.97438 * 24 22 18 43 43 H 1.08999 * 113.61567 * 334.48261 * 25 6 5 44 44 H 1.09000 * 113.61379 * 105.30384 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8052 0.9514 0.0000 4 6 1.9586 -0.6924 1.1994 5 6 1.9587 -0.6925 -1.1994 6 6 1.5539 0.0977 -2.4455 7 1 0.5158 0.4288 -2.4180 8 6 2.5463 1.2119 -2.8178 9 6 2.3228 0.8081 -4.2875 10 1 1.4950 1.3335 -4.7636 11 7 3.5464 0.8234 -5.0929 12 6 3.7383 1.7933 -6.0088 13 8 2.8963 2.6559 -6.1662 14 6 4.9722 1.8090 -6.8204 15 6 5.1721 2.8104 -7.7753 16 9 4.2362 3.7674 -7.9591 17 6 6.3327 2.8220 -8.5277 18 6 7.2876 1.8400 -8.3454 19 6 8.5465 1.8554 -9.1736 20 8 8.4716 0.8370 -10.1732 21 14 8.7302 3.5180 -9.9936 22 6 7.0933 0.8410 -7.4037 23 9 8.0325 -0.1148 -7.2318 24 6 5.9422 0.8203 -6.6416 25 6 1.9469 -0.5883 -3.7645 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 3.0487 -0.6920 1.1997 30 1 1.5953 -0.1786 2.0894 31 1 1.5953 -1.7201 1.1995 32 1 1.5241 -1.6911 -1.2453 33 1 3.0450 -0.7706 -1.1558 34 1 2.1881 2.2133 -2.5793 35 1 3.5610 1.0289 -2.4642 36 1 4.2185 0.1353 -4.9671 37 1 6.4904 3.5972 -9.2629 38 1 9.4069 1.6704 -8.5303 39 1 9.2502 0.7885 -10.7445 40 1 7.5635 3.7821 -10.8734 41 1 8.8414 4.5826 -8.9641 42 1 5.7922 0.0412 -5.9088 43 1 2.7980 -1.2626 -3.6694 44 1 1.1053 -1.0405 -4.2892 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_12360598.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:24:38 Heat of formation + Delta-G solvation = 10.436594 kcal Electronic energy + Delta-G solvation = -28040.088740 eV Core-core repulsion = 23714.821653 eV Total energy + Delta-G solvation = -4325.267086 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.151 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -50.33569 -50.21329 -42.23549 -41.43291 -40.17608 -39.07338 -37.67327 -35.12840 -33.40256 -31.57102 -30.16327 -29.39962 -28.00550 -26.88614 -25.86108 -24.63235 -24.38853 -23.11464 -21.97719 -21.04770 -19.61222 -19.35501 -18.80279 -18.65251 -18.58034 -17.84748 -17.60562 -17.34635 -17.30081 -16.66434 -16.64613 -16.32946 -16.23451 -16.02630 -15.79698 -15.50211 -15.41923 -14.68424 -14.58710 -14.03150 -13.94339 -13.85450 -13.70618 -13.59820 -13.50825 -13.43754 -13.27252 -13.23881 -13.18338 -12.99122 -12.46230 -12.26099 -12.18000 -11.79185 -11.55847 -11.31423 -10.79002 -10.49125 -10.26334 -9.98383 -5.05682 -0.98262 -0.50854 1.01521 1.10945 1.21252 1.54056 1.75551 1.81947 2.06999 2.58940 2.68704 2.88778 2.91806 2.95471 3.12929 3.16276 3.32882 3.38520 3.43023 3.55772 3.68496 3.68773 3.75418 3.84505 3.96056 4.14745 4.15687 4.19984 4.23951 4.32863 4.35717 4.38754 4.49029 4.50141 4.57361 4.65115 4.68214 4.69160 4.78513 4.84677 4.87445 4.92859 5.03060 5.07590 5.19896 5.43051 6.20568 6.74002 6.89444 Molecular weight = 328.15amu Principal moments of inertia in cm(-1) A = 0.022572 B = 0.002614 C = 0.002447 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1240.196483 B =10708.680060 C =11438.646612 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.373 5.373 3 H 0.436 0.564 4 C -0.046 4.046 5 C 0.012 3.988 6 C -0.120 4.120 7 H 0.126 0.874 8 C -0.152 4.152 9 C 0.093 3.907 10 H 0.087 0.913 11 N -0.693 5.693 12 C 0.561 3.439 13 O -0.563 6.563 14 C -0.149 4.149 15 C 0.133 3.867 16 F -0.127 7.127 17 C -0.152 4.152 18 C -0.064 4.064 19 C -0.082 4.082 20 O -0.558 6.558 21 Si 0.769 3.231 22 C 0.107 3.893 23 F -0.119 7.119 24 C -0.066 4.066 25 C -0.126 4.126 26 H 0.125 0.875 27 H 0.118 0.882 28 H 0.124 0.876 29 H 0.126 0.874 30 H 0.123 0.877 31 H 0.121 0.879 32 H 0.145 0.855 33 H 0.147 0.853 34 H 0.074 0.926 35 H 0.115 0.885 36 H 0.419 0.581 37 H 0.143 0.857 38 H 0.106 0.894 39 H 0.410 0.590 40 H -0.291 1.291 41 H -0.282 1.282 42 H 0.200 0.800 43 H 0.118 0.882 44 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.602 -12.105 29.576 33.369 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 N 0.051 4.949 3 H 0.272 0.728 4 C -0.188 4.188 5 C -0.110 4.110 6 C -0.139 4.139 7 H 0.143 0.857 8 C -0.191 4.191 9 C -0.011 4.011 10 H 0.105 0.895 11 N -0.346 5.346 12 C 0.348 3.652 13 O -0.442 6.442 14 C -0.153 4.153 15 C 0.112 3.888 16 F -0.106 7.106 17 C -0.171 4.171 18 C -0.065 4.065 19 C -0.192 4.192 20 O -0.369 6.369 21 Si 0.675 3.325 22 C 0.088 3.912 23 F -0.098 7.098 24 C -0.085 4.085 25 C -0.164 4.164 26 H 0.143 0.857 27 H 0.137 0.863 28 H 0.142 0.858 29 H 0.145 0.855 30 H 0.141 0.859 31 H 0.140 0.860 32 H 0.163 0.837 33 H 0.165 0.835 34 H 0.093 0.907 35 H 0.133 0.867 36 H 0.258 0.742 37 H 0.161 0.839 38 H 0.124 0.876 39 H 0.262 0.738 40 H -0.219 1.219 41 H -0.209 1.209 42 H 0.217 0.783 43 H 0.137 0.863 44 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -11.199 -11.091 29.668 33.595 hybrid contribution 0.052 0.350 -0.427 0.554 sum -11.148 -10.742 29.241 33.086 Atomic orbital electron populations 1.24196 0.76432 1.09732 1.09359 1.44813 1.15826 1.19488 1.14774 0.72804 1.24137 1.05787 1.02399 0.86475 1.23905 1.06060 0.99523 0.81550 1.22774 1.01550 0.96209 0.93329 0.85664 1.23810 1.01473 0.99762 0.94008 1.22874 0.86832 1.00266 0.91174 0.89478 1.45701 1.23076 1.28415 1.37367 1.17904 0.84770 0.82353 0.80189 1.90887 1.45549 1.39044 1.68703 1.19924 0.97979 0.97448 0.99937 1.17836 0.86905 0.87654 0.96394 1.91595 1.63603 1.61420 1.93932 1.20945 0.93106 1.01369 1.01630 1.19735 0.96322 0.93871 0.96606 1.24721 0.95663 1.04608 0.94227 1.86426 1.48084 1.55138 1.47285 0.93767 0.85561 0.72199 0.81005 1.17307 0.88535 0.87827 0.97577 1.91588 1.63006 1.60890 1.94269 1.21442 0.89756 0.98165 0.99126 1.23352 1.03563 0.94773 0.94729 0.85652 0.86342 0.85758 0.85523 0.85864 0.86010 0.83706 0.83462 0.90684 0.86692 0.74171 0.83929 0.87621 0.73777 1.21881 1.20867 0.78327 0.86332 0.90181 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.46 8.97 127.69 1.15 4.60 16 2 N -0.37 24.69 0.66 -948.85 -0.62 24.07 16 3 H 0.44 -29.81 8.44 -89.69 -0.76 -30.57 16 4 C -0.05 2.98 9.19 127.69 1.17 4.16 16 5 C 0.01 -0.72 4.47 86.30 0.39 -0.34 16 6 C -0.12 6.38 3.55 -10.26 -0.04 6.34 16 7 H 0.13 -6.80 6.13 -2.39 -0.01 -6.81 16 8 C -0.15 6.87 7.45 31.21 0.23 7.10 16 9 C 0.09 -3.23 4.25 45.61 0.19 -3.04 16 10 H 0.09 -2.33 7.47 -2.39 -0.02 -2.34 16 11 N -0.69 20.64 5.31 -442.62 -2.35 18.29 16 12 C 0.56 -9.49 7.77 86.74 0.67 -8.82 16 13 O -0.56 3.69 14.94 -3.92 -0.06 3.63 16 14 C -0.15 2.36 5.88 -20.06 -0.12 2.24 16 15 C 0.13 -1.17 7.28 22.67 0.17 -1.00 16 16 F -0.13 0.33 15.55 44.97 0.70 1.02 16 17 C -0.15 1.49 8.62 22.28 0.19 1.69 16 18 C -0.06 0.82 5.30 -19.78 -0.10 0.71 16 19 C -0.08 1.32 2.43 71.24 0.17 1.49 16 20 O -0.56 8.44 12.86 -148.98 -1.92 6.53 16 21 Si 0.77 -12.19 30.18 68.60 2.07 -10.12 16 22 C 0.11 -1.77 7.23 22.33 0.16 -1.61 16 23 F -0.12 1.88 16.73 44.97 0.75 2.63 16 24 C -0.07 1.47 9.51 22.57 0.21 1.68 16 25 C -0.13 5.62 7.39 31.12 0.23 5.85 16 26 H 0.13 -7.80 8.14 -2.39 -0.02 -7.82 16 27 H 0.12 -7.25 6.11 -2.38 -0.01 -7.26 16 28 H 0.12 -7.76 8.11 -2.39 -0.02 -7.77 16 29 H 0.13 -8.17 8.11 -2.38 -0.02 -8.19 16 30 H 0.12 -7.81 8.14 -2.39 -0.02 -7.83 16 31 H 0.12 -7.75 8.14 -2.38 -0.02 -7.77 16 32 H 0.14 -9.23 8.09 -2.39 -0.02 -9.25 16 33 H 0.15 -9.54 7.82 -2.39 -0.02 -9.56 16 34 H 0.07 -3.12 8.14 -2.39 -0.02 -3.14 16 35 H 0.11 -5.56 7.92 -2.39 -0.02 -5.58 16 36 H 0.42 -15.56 6.76 -92.71 -0.63 -16.18 16 37 H 0.14 -1.27 4.87 -2.91 -0.01 -1.29 16 38 H 0.11 -2.13 7.89 -2.38 -0.02 -2.15 16 39 H 0.41 -10.20 8.74 -74.06 -0.65 -10.85 16 40 H -0.29 2.42 6.74 99.48 0.67 3.09 16 41 H -0.28 2.97 7.11 99.48 0.71 3.67 16 42 H 0.20 -6.59 6.41 -2.91 -0.02 -6.61 16 43 H 0.12 -5.73 8.08 -2.39 -0.02 -5.75 16 44 H 0.08 -3.28 8.14 -2.39 -0.02 -3.30 16 Total: 1.00 -88.45 361.03 2.29 -86.16 By element: Atomic # 1 Polarization: -152.30 SS G_CDS: -0.96 Total: -153.26 kcal Atomic # 6 Polarization: 16.38 SS G_CDS: 4.68 Total: 21.06 kcal Atomic # 7 Polarization: 45.33 SS G_CDS: -2.97 Total: 42.36 kcal Atomic # 8 Polarization: 12.13 SS G_CDS: -1.97 Total: 10.16 kcal Atomic # 9 Polarization: 2.21 SS G_CDS: 1.45 Total: 3.66 kcal Atomic # 14 Polarization: -12.19 SS G_CDS: 2.07 Total: -10.12 kcal Total: -88.45 2.29 -86.16 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_12360598.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 96.592 kcal (2) G-P(sol) polarization free energy of solvation -88.449 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.143 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.294 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -86.155 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.437 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds