Wall clock time and date at job start Sun Mar 7 2021 06:24:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35653 * 117.00051 * 2 1 4 4 C 1.40141 * 120.15237 * 179.97438 * 3 2 1 5 5 C 1.47533 * 120.18880 * 0.02562 * 4 3 2 6 6 O 1.21586 * 119.99947 * 359.97438 * 5 4 3 7 7 N 1.34776 * 120.00297 * 179.97438 * 5 4 3 8 8 C 1.46500 * 120.00392 * 179.97438 * 7 5 4 9 9 H 1.09000 * 112.84864 * 23.80260 * 8 7 5 10 10 C 1.53784 * 113.61237 * 155.00272 * 8 7 5 11 11 C 1.53776 * 87.07948 * 139.97861 * 10 8 7 12 12 H 1.09005 * 113.61174 * 89.19930 * 11 10 8 13 13 C 1.52993 * 113.61612 * 220.01369 * 11 10 8 14 14 N 1.46906 * 109.47378 * 183.47191 * 13 11 10 15 15 H 1.00895 * 109.46764 * 55.00536 * 14 13 11 16 16 C 1.46905 * 109.46946 * 175.00102 * 14 13 11 17 17 C 1.46901 * 109.47123 * 295.00219 * 14 13 11 18 18 C 1.53781 * 87.17483 * 334.60761 * 11 10 8 19 19 C 1.39704 * 119.61799 * 180.27669 * 4 3 2 20 20 C 1.37787 * 119.90728 * 359.51465 * 19 4 3 21 21 C 1.50704 * 119.85048 * 180.20587 * 20 19 4 22 22 O 1.42897 * 109.47296 * 300.28597 * 21 20 19 23 23 Si 1.86298 * 109.47244 * 180.28042 * 21 20 19 24 24 C 1.38549 * 120.30117 * 0.49144 * 20 19 4 25 25 C 1.38048 * 120.38934 * 359.74014 * 24 20 19 26 26 H 1.09003 * 109.46747 * 59.99426 * 1 2 3 27 27 H 1.08993 * 109.47026 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47036 * 299.99755 * 1 2 3 29 29 H 0.97008 * 119.99540 * 0.02562 * 7 5 4 30 30 H 1.08995 * 113.61633 * 25.42906 * 10 8 7 31 31 H 1.09002 * 113.68664 * 254.53988 * 10 8 7 32 32 H 1.09004 * 109.46862 * 63.47294 * 13 11 10 33 33 H 1.09000 * 109.47250 * 303.47317 * 13 11 10 34 34 H 1.09000 * 109.47033 * 60.00260 * 16 14 13 35 35 H 1.09002 * 109.46770 * 180.02562 * 16 14 13 36 36 H 1.08994 * 109.46907 * 300.00060 * 16 14 13 37 37 H 1.08996 * 109.46863 * 60.00055 * 17 14 13 38 38 H 1.09002 * 109.47150 * 179.97438 * 17 14 13 39 39 H 1.08998 * 109.46623 * 299.99659 * 17 14 13 40 40 H 1.08998 * 113.61494 * 139.93919 * 18 11 10 41 41 H 1.08997 * 113.61207 * 270.83907 * 18 11 10 42 42 H 1.07997 * 120.04526 * 179.72726 * 19 4 3 43 43 H 1.09002 * 109.46772 * 60.28027 * 21 20 19 44 44 H 0.96696 * 113.99825 * 180.02562 * 22 21 20 45 45 H 1.48502 * 110.00234 * 298.68607 * 23 21 20 46 46 H 1.48497 * 110.00021 * 59.99959 * 23 21 20 47 47 H 1.08001 * 119.80522 * 179.71336 * 24 20 19 48 48 H 1.08003 * 119.95874 * 180.02562 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4442 1.2857 0.0005 5 6 4.2550 0.0532 0.0005 6 8 3.7095 -1.0334 0.0005 7 7 5.6005 0.1317 0.0005 8 6 6.4057 -1.0922 0.0011 9 1 5.8706 -1.9511 -0.4039 10 6 7.8112 -0.9051 -0.5944 11 6 8.3238 -1.8197 0.5305 12 1 8.3150 -2.8783 0.2707 13 6 9.6564 -1.3662 1.1298 14 7 10.1007 -2.3439 2.1322 15 1 10.1394 -3.2610 1.7133 16 6 11.4352 -1.9721 2.6210 17 6 9.1541 -2.3581 3.2555 18 6 7.0984 -1.3755 1.3465 19 6 4.0668 2.5363 0.0064 20 6 3.3038 3.6837 0.0015 21 6 3.9768 5.0321 0.0031 22 8 4.7920 5.1562 1.1702 23 14 2.6826 6.3721 0.0041 24 6 1.9206 3.6033 0.0010 25 6 1.2925 2.3740 0.0000 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 6.0358 0.9986 0.0009 30 1 8.1810 0.1180 -0.5279 31 1 7.9251 -1.3324 -1.5907 32 1 9.5292 -0.3926 1.6034 33 1 10.4034 -1.2910 0.3396 34 1 11.3934 -0.9814 3.0735 35 1 11.7650 -2.6979 3.3644 36 1 12.1375 -1.9616 1.7875 37 1 8.1640 -2.6340 2.8928 38 1 9.4835 -3.0839 3.9991 39 1 9.1125 -1.3673 3.7080 40 1 6.6364 -2.1826 1.9150 41 1 7.2730 -0.4812 1.9447 42 1 5.1447 2.6038 0.0113 43 1 4.5991 5.1286 -0.8866 44 1 5.2562 6.0018 1.2375 45 1 1.8483 6.2734 -1.2205 46 1 1.8275 6.2515 1.2121 47 1 1.3304 4.5078 0.0018 48 1 0.2139 2.3195 -0.0007 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_12496546.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:24:43 Heat of formation + Delta-G solvation = 88.542276 kcal Electronic energy + Delta-G solvation = -27829.524032 eV Core-core repulsion = 23972.332002 eV Total energy + Delta-G solvation = -3857.192030 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.185 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -44.50622 -42.64684 -41.68238 -40.12823 -39.88356 -38.00997 -35.85651 -33.62182 -32.75945 -32.09248 -31.91733 -29.37376 -28.50616 -28.11166 -26.91048 -26.61207 -25.18639 -23.40563 -22.72714 -22.24265 -21.42630 -20.33940 -20.14885 -19.75641 -19.32390 -19.01457 -18.58967 -17.98918 -17.79861 -17.59843 -17.05187 -16.94200 -16.82417 -16.38718 -16.30741 -16.28039 -15.91775 -15.86516 -15.81417 -15.55015 -15.41862 -15.18569 -15.06837 -14.83584 -14.72132 -14.63803 -14.27279 -14.04662 -13.74214 -13.46825 -13.25210 -13.20346 -13.02749 -12.83354 -12.65675 -11.74799 -11.21825 -11.14505 -10.98964 -10.05222 -5.67506 -1.43386 -1.09728 -0.59295 0.49992 0.53447 0.55942 0.72313 0.89737 0.95768 1.03576 1.24938 1.34115 1.43997 1.45955 1.65288 1.68932 1.80690 1.82421 1.88291 1.98434 2.05408 2.20637 2.23515 2.30425 2.33553 2.38676 2.50175 2.64488 2.77410 2.92767 2.95576 3.00599 3.08124 3.20318 3.23050 3.25345 3.37120 3.44548 3.47741 3.51479 3.65421 3.68894 3.82248 3.91704 4.06919 4.26087 4.33750 4.45647 4.68040 5.37914 5.54961 5.78162 6.30444 Molecular weight = 322.19amu Principal moments of inertia in cm(-1) A = 0.012690 B = 0.003373 C = 0.002810 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2205.950380 B = 8300.023864 C = 9962.299746 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.280 6.280 3 C 0.196 3.804 4 C -0.182 4.182 5 C 0.568 3.432 6 O -0.509 6.509 7 N -0.726 5.726 8 C 0.132 3.868 9 H 0.124 0.876 10 C -0.132 4.132 11 C -0.143 4.143 12 H 0.118 0.882 13 C 0.003 3.997 14 N -0.386 5.386 15 H 0.427 0.573 16 C -0.048 4.048 17 C -0.057 4.057 18 C -0.163 4.163 19 C -0.016 4.016 20 C -0.123 4.123 21 C -0.064 4.064 22 O -0.549 6.549 23 Si 0.679 3.321 24 C -0.049 4.049 25 C -0.210 4.210 26 H 0.060 0.940 27 H 0.108 0.892 28 H 0.060 0.940 29 H 0.401 0.599 30 H 0.098 0.902 31 H 0.093 0.907 32 H 0.130 0.870 33 H 0.133 0.867 34 H 0.121 0.879 35 H 0.124 0.876 36 H 0.123 0.877 37 H 0.128 0.872 38 H 0.123 0.877 39 H 0.121 0.879 40 H 0.086 0.914 41 H 0.097 0.903 42 H 0.135 0.865 43 H 0.077 0.923 44 H 0.385 0.615 45 H -0.253 1.253 46 H -0.249 1.249 47 H 0.128 0.872 48 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 25.108 -9.164 6.429 27.490 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.190 6.190 3 C 0.147 3.853 4 C -0.186 4.186 5 C 0.357 3.643 6 O -0.384 6.384 7 N -0.379 5.379 8 C 0.027 3.973 9 H 0.142 0.858 10 C -0.171 4.171 11 C -0.163 4.163 12 H 0.136 0.864 13 C -0.119 4.119 14 N 0.039 4.961 15 H 0.262 0.738 16 C -0.190 4.190 17 C -0.199 4.199 18 C -0.201 4.201 19 C -0.035 4.035 20 C -0.123 4.123 21 C -0.175 4.175 22 O -0.356 6.356 23 Si 0.580 3.420 24 C -0.067 4.067 25 C -0.229 4.229 26 H 0.079 0.921 27 H 0.127 0.873 28 H 0.079 0.921 29 H 0.237 0.763 30 H 0.116 0.884 31 H 0.111 0.889 32 H 0.148 0.852 33 H 0.151 0.849 34 H 0.140 0.860 35 H 0.143 0.857 36 H 0.142 0.858 37 H 0.146 0.854 38 H 0.142 0.858 39 H 0.140 0.860 40 H 0.105 0.895 41 H 0.115 0.885 42 H 0.152 0.848 43 H 0.095 0.905 44 H 0.233 0.767 45 H -0.178 1.178 46 H -0.173 1.173 47 H 0.145 0.855 48 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 23.651 -10.335 6.650 26.653 hybrid contribution 0.072 -0.089 -0.240 0.266 sum 23.723 -10.424 6.410 26.693 Atomic orbital electron populations 1.23286 0.77711 1.05053 1.01722 1.86344 1.21597 1.25014 1.86073 1.19062 0.90935 0.85084 0.90256 1.19195 0.90817 0.93607 1.15001 1.17981 0.81693 0.88777 0.75884 1.90867 1.71391 1.28605 1.47551 1.45797 1.06035 1.08880 1.77204 1.22304 0.89975 0.89996 0.95059 0.85841 1.23362 0.95045 1.00186 0.98513 1.22943 0.91053 1.02441 0.99817 0.86437 1.24071 1.00792 0.94062 0.92964 1.45075 1.15819 1.18689 1.16516 0.73799 1.24138 0.81280 1.07675 1.05881 1.24346 0.96234 1.09560 0.89724 1.23953 0.94944 1.02739 0.98484 1.20843 0.99566 0.89708 0.93373 1.19137 0.92836 0.94139 1.06186 1.24539 1.01865 1.00395 0.90719 1.86435 1.64618 1.42127 1.42396 0.95005 0.79759 0.86157 0.81031 1.20940 0.93879 0.97386 0.94460 1.21248 1.01030 0.91414 1.09163 0.92099 0.87349 0.92143 0.76290 0.88376 0.88872 0.85181 0.84899 0.86011 0.85727 0.85836 0.85401 0.85830 0.86007 0.89501 0.88491 0.84765 0.90528 0.76703 1.17756 1.17349 0.85498 0.83894 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.14 9.81 101.05 0.99 0.85 16 2 O -0.28 1.36 8.57 -40.54 -0.35 1.02 16 3 C 0.20 -1.14 6.70 -38.69 -0.26 -1.40 16 4 C -0.18 1.36 5.89 -104.85 -0.62 0.74 16 5 C 0.57 -4.72 7.76 -12.47 -0.10 -4.82 16 6 O -0.51 2.21 14.76 -16.59 -0.24 1.97 16 7 N -0.73 10.14 5.31 -53.97 -0.29 9.86 16 8 C 0.13 -2.29 4.24 -67.03 -0.28 -2.57 16 9 H 0.12 -1.78 7.46 -51.93 -0.39 -2.17 16 10 C -0.13 2.85 7.40 -25.92 -0.19 2.65 16 11 C -0.14 3.69 3.34 -89.81 -0.30 3.39 16 12 H 0.12 -3.12 8.11 -51.93 -0.42 -3.54 16 13 C 0.00 -0.08 4.57 -3.82 -0.02 -0.10 16 14 N -0.39 12.42 0.66 -251.25 -0.17 12.26 16 15 H 0.43 -14.46 8.42 -39.29 -0.33 -14.79 16 16 C -0.05 1.51 9.19 60.07 0.55 2.06 16 17 C -0.06 1.72 8.55 60.07 0.51 2.24 16 18 C -0.16 3.57 5.60 -25.83 -0.14 3.43 16 19 C -0.02 0.15 9.08 -39.20 -0.36 -0.20 16 20 C -0.12 0.98 5.42 -104.67 -0.57 0.41 16 21 C -0.06 0.65 2.81 36.01 0.10 0.76 16 22 O -0.55 5.80 12.73 -35.23 -0.45 5.35 16 23 Si 0.68 -6.49 29.77 -169.99 -5.06 -11.55 16 24 C -0.05 0.34 8.66 -39.54 -0.34 0.00 16 25 C -0.21 1.44 9.03 -39.48 -0.36 1.08 16 26 H 0.06 -0.56 7.66 -51.93 -0.40 -0.96 16 27 H 0.11 -0.99 8.14 -51.93 -0.42 -1.42 16 28 H 0.06 -0.56 7.66 -51.93 -0.40 -0.95 16 29 H 0.40 -6.54 6.76 -40.82 -0.28 -6.81 16 30 H 0.10 -2.19 8.08 -51.93 -0.42 -2.61 16 31 H 0.09 -1.88 8.14 -51.93 -0.42 -2.30 16 32 H 0.13 -3.90 7.82 -51.93 -0.41 -4.30 16 33 H 0.13 -4.05 8.09 -51.93 -0.42 -4.47 16 34 H 0.12 -3.76 8.14 -51.93 -0.42 -4.19 16 35 H 0.12 -3.89 8.14 -51.93 -0.42 -4.31 16 36 H 0.12 -3.87 8.11 -51.93 -0.42 -4.29 16 37 H 0.13 -3.70 5.02 -51.93 -0.26 -3.96 16 38 H 0.12 -3.76 8.14 -51.93 -0.42 -4.18 16 39 H 0.12 -3.65 8.11 -51.93 -0.42 -4.07 16 40 H 0.09 -1.84 7.15 -51.93 -0.37 -2.21 16 41 H 0.10 -2.19 7.92 -51.93 -0.41 -2.60 16 42 H 0.13 -1.73 6.40 -52.49 -0.34 -2.06 16 43 H 0.08 -0.92 7.96 -51.93 -0.41 -1.34 16 44 H 0.38 -5.77 8.74 45.56 0.40 -5.38 16 45 H -0.25 1.72 7.11 56.52 0.40 2.12 16 46 H -0.25 1.53 7.11 56.52 0.40 1.93 16 47 H 0.13 -0.93 4.85 -52.49 -0.25 -1.18 16 48 H 0.14 -1.23 6.30 -52.48 -0.33 -1.56 16 LS Contribution 375.39 15.07 5.66 5.66 Total: 1.00 -38.66 375.39 -9.86 -48.52 By element: Atomic # 1 Polarization: -74.02 SS G_CDS: -7.59 Total: -81.61 kcal Atomic # 6 Polarization: 9.90 SS G_CDS: -1.38 Total: 8.52 kcal Atomic # 7 Polarization: 22.57 SS G_CDS: -0.45 Total: 22.12 kcal Atomic # 8 Polarization: 9.38 SS G_CDS: -1.04 Total: 8.34 kcal Atomic # 14 Polarization: -6.49 SS G_CDS: -5.06 Total: -11.55 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -38.66 -9.86 -48.52 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_12496546.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 137.064 kcal (2) G-P(sol) polarization free energy of solvation -38.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 98.403 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -48.522 kcal (6) G-S(sol) free energy of system = (1) + (5) 88.542 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds