Wall clock time and date at job start Sun Mar 7 2021 06:24:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35653 * 117.00051 * 2 1 4 4 C 1.40141 * 120.15237 * 179.97438 * 3 2 1 5 5 C 1.47533 * 120.18880 * 0.02562 * 4 3 2 6 6 O 1.21586 * 119.99947 * 359.97438 * 5 4 3 7 7 N 1.34776 * 120.00297 * 179.97438 * 5 4 3 8 8 C 1.46500 * 120.00392 * 179.97438 * 7 5 4 9 9 H 1.09000 * 112.84864 * 23.80260 * 8 7 5 10 10 C 1.53784 * 113.61237 * 155.00272 * 8 7 5 11 11 C 1.53776 * 87.07948 * 139.97861 * 10 8 7 12 12 H 1.09005 * 113.61174 * 89.19930 * 11 10 8 13 13 C 1.52993 * 113.61612 * 220.01369 * 11 10 8 14 14 N 1.46906 * 109.47378 * 183.47191 * 13 11 10 15 15 H 1.00895 * 109.46764 * 55.00536 * 14 13 11 16 16 C 1.46905 * 109.46946 * 175.00102 * 14 13 11 17 17 C 1.46901 * 109.47123 * 295.00219 * 14 13 11 18 18 C 1.53781 * 87.17483 * 334.60761 * 11 10 8 19 19 C 1.39704 * 119.61799 * 180.27669 * 4 3 2 20 20 C 1.37787 * 119.90728 * 359.51465 * 19 4 3 21 21 C 1.50704 * 119.85048 * 180.20587 * 20 19 4 22 22 O 1.42897 * 109.47296 * 300.28597 * 21 20 19 23 23 Si 1.86298 * 109.47244 * 180.28042 * 21 20 19 24 24 C 1.38549 * 120.30117 * 0.49144 * 20 19 4 25 25 C 1.38048 * 120.38934 * 359.74014 * 24 20 19 26 26 H 1.09003 * 109.46747 * 59.99426 * 1 2 3 27 27 H 1.08993 * 109.47026 * 179.97438 * 1 2 3 28 28 H 1.08996 * 109.47036 * 299.99755 * 1 2 3 29 29 H 0.97008 * 119.99540 * 0.02562 * 7 5 4 30 30 H 1.08995 * 113.61633 * 25.42906 * 10 8 7 31 31 H 1.09002 * 113.68664 * 254.53988 * 10 8 7 32 32 H 1.09004 * 109.46862 * 63.47294 * 13 11 10 33 33 H 1.09000 * 109.47250 * 303.47317 * 13 11 10 34 34 H 1.09000 * 109.47033 * 60.00260 * 16 14 13 35 35 H 1.09002 * 109.46770 * 180.02562 * 16 14 13 36 36 H 1.08994 * 109.46907 * 300.00060 * 16 14 13 37 37 H 1.08996 * 109.46863 * 60.00055 * 17 14 13 38 38 H 1.09002 * 109.47150 * 179.97438 * 17 14 13 39 39 H 1.08998 * 109.46623 * 299.99659 * 17 14 13 40 40 H 1.08998 * 113.61494 * 139.93919 * 18 11 10 41 41 H 1.08997 * 113.61207 * 270.83907 * 18 11 10 42 42 H 1.07997 * 120.04526 * 179.72726 * 19 4 3 43 43 H 1.09002 * 109.46772 * 60.28027 * 21 20 19 44 44 H 0.96696 * 113.99825 * 180.02562 * 22 21 20 45 45 H 1.48502 * 110.00234 * 298.68607 * 23 21 20 46 46 H 1.48497 * 110.00021 * 59.99959 * 23 21 20 47 47 H 1.08001 * 119.80522 * 179.71336 * 24 20 19 48 48 H 1.08003 * 119.95874 * 180.02562 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4442 1.2857 0.0005 5 6 4.2550 0.0532 0.0005 6 8 3.7095 -1.0334 0.0005 7 7 5.6005 0.1317 0.0005 8 6 6.4057 -1.0922 0.0011 9 1 5.8706 -1.9511 -0.4039 10 6 7.8112 -0.9051 -0.5944 11 6 8.3238 -1.8197 0.5305 12 1 8.3150 -2.8783 0.2707 13 6 9.6564 -1.3662 1.1298 14 7 10.1007 -2.3439 2.1322 15 1 10.1394 -3.2610 1.7133 16 6 11.4352 -1.9721 2.6210 17 6 9.1541 -2.3581 3.2555 18 6 7.0984 -1.3755 1.3465 19 6 4.0668 2.5363 0.0064 20 6 3.3038 3.6837 0.0015 21 6 3.9768 5.0321 0.0031 22 8 4.7920 5.1562 1.1702 23 14 2.6826 6.3721 0.0041 24 6 1.9206 3.6033 0.0010 25 6 1.2925 2.3740 0.0000 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 6.0358 0.9986 0.0009 30 1 8.1810 0.1180 -0.5279 31 1 7.9251 -1.3324 -1.5907 32 1 9.5292 -0.3926 1.6034 33 1 10.4034 -1.2910 0.3396 34 1 11.3934 -0.9814 3.0735 35 1 11.7650 -2.6979 3.3644 36 1 12.1375 -1.9616 1.7875 37 1 8.1640 -2.6340 2.8928 38 1 9.4835 -3.0839 3.9991 39 1 9.1125 -1.3673 3.7080 40 1 6.6364 -2.1826 1.9150 41 1 7.2730 -0.4812 1.9447 42 1 5.1447 2.6038 0.0113 43 1 4.5991 5.1286 -0.8866 44 1 5.2562 6.0018 1.2375 45 1 1.8483 6.2734 -1.2205 46 1 1.8275 6.2515 1.2121 47 1 1.3304 4.5078 0.0018 48 1 0.2139 2.3195 -0.0007 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_12496546.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:24:43 Heat of formation + Delta-G solvation = 61.367053 kcal Electronic energy + Delta-G solvation = -27830.702438 eV Core-core repulsion = 23972.332002 eV Total energy + Delta-G solvation = -3858.370436 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.185 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.28151 -41.82579 -40.44646 -39.24041 -38.89667 -37.20911 -34.84499 -32.78528 -32.06298 -30.07812 -29.50318 -28.69334 -26.70991 -26.21250 -26.16907 -25.25497 -23.72152 -22.42637 -21.61866 -20.92924 -19.57040 -19.08509 -18.51849 -18.16950 -18.07218 -17.70770 -17.34664 -17.00126 -16.65925 -16.36238 -16.05482 -16.01354 -15.84039 -15.56787 -14.97210 -14.65777 -14.50190 -14.20052 -13.96596 -13.91184 -13.69798 -13.56977 -13.49046 -13.40264 -13.27789 -13.08596 -13.03796 -12.82600 -12.61147 -12.42702 -12.29015 -12.25843 -11.98206 -11.77155 -11.49622 -11.02780 -10.44430 -10.33550 -10.04964 -9.43109 -4.97371 -0.47002 0.04183 1.04606 1.28832 1.58228 1.63582 1.94258 2.03696 2.09631 2.51009 2.90051 2.97961 3.21709 3.27080 3.34896 3.38405 3.47178 3.50049 3.69731 3.73445 3.80426 3.87532 3.97433 4.04228 4.12926 4.16905 4.17484 4.22227 4.22686 4.34241 4.40655 4.41612 4.48597 4.53919 4.57315 4.68056 4.71336 4.73196 4.76755 4.78442 4.85562 4.89083 4.89934 4.95534 5.06829 5.09874 5.18925 5.36148 5.52984 6.09924 6.43640 6.91467 7.14790 Molecular weight = 322.19amu Principal moments of inertia in cm(-1) A = 0.012690 B = 0.003373 C = 0.002810 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2205.950380 B = 8300.023864 C = 9962.299746 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.012 3.988 2 O -0.306 6.306 3 C 0.168 3.832 4 C -0.193 4.193 5 C 0.561 3.439 6 O -0.563 6.563 7 N -0.703 5.703 8 C 0.094 3.906 9 H 0.083 0.917 10 C -0.126 4.126 11 C -0.115 4.115 12 H 0.126 0.874 13 C 0.013 3.987 14 N -0.369 5.369 15 H 0.438 0.562 16 C -0.046 4.046 17 C -0.058 4.058 18 C -0.153 4.153 19 C -0.004 4.004 20 C -0.134 4.134 21 C -0.053 4.053 22 O -0.558 6.558 23 Si 0.747 3.253 24 C -0.070 4.070 25 C -0.219 4.219 26 H 0.067 0.933 27 H 0.114 0.886 28 H 0.067 0.933 29 H 0.414 0.586 30 H 0.116 0.884 31 H 0.079 0.921 32 H 0.140 0.860 33 H 0.152 0.848 34 H 0.120 0.880 35 H 0.123 0.877 36 H 0.128 0.872 37 H 0.113 0.887 38 H 0.126 0.874 39 H 0.122 0.878 40 H 0.076 0.924 41 H 0.111 0.889 42 H 0.174 0.826 43 H 0.109 0.891 44 H 0.406 0.594 45 H -0.295 1.295 46 H -0.303 1.303 47 H 0.122 0.878 48 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 29.285 -8.616 6.875 31.291 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.218 6.218 3 C 0.119 3.881 4 C -0.197 4.197 5 C 0.349 3.651 6 O -0.443 6.443 7 N -0.356 5.356 8 C -0.010 4.010 9 H 0.102 0.898 10 C -0.164 4.164 11 C -0.134 4.134 12 H 0.144 0.856 13 C -0.109 4.109 14 N 0.054 4.946 15 H 0.275 0.725 16 C -0.188 4.188 17 C -0.201 4.201 18 C -0.192 4.192 19 C -0.022 4.022 20 C -0.135 4.135 21 C -0.164 4.164 22 O -0.368 6.368 23 Si 0.656 3.344 24 C -0.088 4.088 25 C -0.237 4.237 26 H 0.086 0.914 27 H 0.132 0.868 28 H 0.086 0.914 29 H 0.253 0.747 30 H 0.134 0.866 31 H 0.098 0.902 32 H 0.158 0.842 33 H 0.169 0.831 34 H 0.138 0.862 35 H 0.141 0.859 36 H 0.146 0.854 37 H 0.132 0.868 38 H 0.144 0.856 39 H 0.140 0.860 40 H 0.094 0.906 41 H 0.129 0.871 42 H 0.191 0.809 43 H 0.127 0.873 44 H 0.258 0.742 45 H -0.223 1.223 46 H -0.231 1.231 47 H 0.139 0.861 48 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 27.916 -9.753 7.093 30.409 hybrid contribution -1.292 -0.243 -0.364 1.365 sum 26.623 -9.996 6.729 29.223 Atomic orbital electron populations 1.23426 0.76745 1.05673 1.02427 1.86312 1.22896 1.25955 1.86587 1.19408 0.91992 0.84965 0.91693 1.19591 0.90664 0.94996 1.14464 1.18065 0.83436 0.87725 0.75858 1.90830 1.72746 1.30117 1.50565 1.45727 1.04264 1.10866 1.74762 1.22777 0.91095 0.87570 0.99588 0.89835 1.23326 0.91896 1.02167 0.99036 1.22686 0.91968 1.02193 0.96591 0.85616 1.23891 0.98543 0.94581 0.93902 1.44828 1.15304 1.18949 1.15514 0.72488 1.24133 0.81037 1.07571 1.06033 1.24288 0.95851 1.09695 0.90249 1.23906 0.95825 1.03144 0.96307 1.21175 1.01281 0.88204 0.91571 1.19525 0.92531 0.95866 1.05557 1.24367 1.01883 0.97859 0.92329 1.86393 1.64498 1.43943 1.42010 0.94467 0.78662 0.85304 0.75955 1.21082 0.94966 0.97071 0.95644 1.21351 1.01531 0.91398 1.09455 0.91421 0.86779 0.91401 0.74699 0.86598 0.90232 0.84205 0.83058 0.86178 0.85859 0.85361 0.86828 0.85554 0.85950 0.90563 0.87091 0.80913 0.87314 0.74204 1.22310 1.23098 0.86096 0.83272 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.15 9.81 113.37 1.11 0.97 16 2 O -0.31 1.59 8.57 -68.77 -0.59 1.00 16 3 C 0.17 -1.30 6.70 22.85 0.15 -1.15 16 4 C -0.19 2.35 5.89 -20.01 -0.12 2.23 16 5 C 0.56 -7.44 7.76 86.69 0.67 -6.77 16 6 O -0.56 2.11 14.76 16.93 0.25 2.36 16 7 N -0.70 18.34 5.31 -442.92 -2.35 15.99 16 8 C 0.09 -3.03 4.24 45.58 0.19 -2.84 16 9 H 0.08 -2.00 7.46 -2.39 -0.02 -2.02 16 10 C -0.13 5.35 7.40 31.12 0.23 5.58 16 11 C -0.12 5.95 3.34 -10.27 -0.03 5.92 16 12 H 0.13 -6.66 8.11 -2.38 -0.02 -6.68 16 13 C 0.01 -0.78 4.57 86.30 0.39 -0.39 16 14 N -0.37 24.11 0.66 -948.83 -0.62 23.48 16 15 H 0.44 -30.05 8.42 -89.70 -0.75 -30.80 16 16 C -0.05 2.93 9.19 127.69 1.17 4.11 16 17 C -0.06 3.53 8.55 127.69 1.09 4.62 16 18 C -0.15 6.57 5.60 31.18 0.17 6.75 16 19 C 0.00 0.07 9.08 22.52 0.20 0.28 16 20 C -0.13 2.01 5.42 -19.90 -0.11 1.90 16 21 C -0.05 1.10 2.81 71.24 0.20 1.30 16 22 O -0.56 12.58 12.73 -148.98 -1.90 10.68 16 23 Si 0.75 -13.08 29.77 68.60 2.04 -11.04 16 24 C -0.07 0.76 8.66 22.30 0.19 0.95 16 25 C -0.22 2.18 9.03 22.34 0.20 2.39 16 26 H 0.07 -0.99 7.66 -2.39 -0.02 -1.01 16 27 H 0.11 -1.68 8.14 -2.39 -0.02 -1.70 16 28 H 0.07 -1.00 7.66 -2.39 -0.02 -1.02 16 29 H 0.41 -13.48 6.76 -92.70 -0.63 -14.10 16 30 H 0.12 -5.32 8.08 -2.39 -0.02 -5.34 16 31 H 0.08 -3.11 8.14 -2.39 -0.02 -3.13 16 32 H 0.14 -8.70 7.82 -2.38 -0.02 -8.72 16 33 H 0.15 -9.63 8.09 -2.39 -0.02 -9.65 16 34 H 0.12 -7.53 8.14 -2.39 -0.02 -7.55 16 35 H 0.12 -7.73 8.14 -2.39 -0.02 -7.75 16 36 H 0.13 -8.21 8.11 -2.39 -0.02 -8.23 16 37 H 0.11 -6.47 5.02 -2.39 -0.01 -6.48 16 38 H 0.13 -7.64 8.14 -2.39 -0.02 -7.66 16 39 H 0.12 -7.34 8.11 -2.39 -0.02 -7.36 16 40 H 0.08 -3.05 7.15 -2.39 -0.02 -3.07 16 41 H 0.11 -5.04 7.92 -2.39 -0.02 -5.06 16 42 H 0.17 -4.69 6.40 -2.91 -0.02 -4.71 16 43 H 0.11 -2.88 7.96 -2.39 -0.02 -2.90 16 44 H 0.41 -13.00 8.74 -74.06 -0.65 -13.64 16 45 H -0.30 3.14 7.11 99.48 0.71 3.85 16 46 H -0.30 2.63 7.11 99.48 0.71 3.34 16 47 H 0.12 -1.32 4.85 -2.91 -0.01 -1.33 16 48 H 0.15 -1.96 6.30 -2.91 -0.02 -1.98 16 Total: 1.00 -87.95 375.39 1.57 -86.38 By element: Atomic # 1 Polarization: -153.70 SS G_CDS: -1.00 Total: -154.70 kcal Atomic # 6 Polarization: 20.11 SS G_CDS: 5.74 Total: 25.85 kcal Atomic # 7 Polarization: 42.45 SS G_CDS: -2.98 Total: 39.47 kcal Atomic # 8 Polarization: 16.28 SS G_CDS: -2.24 Total: 14.04 kcal Atomic # 14 Polarization: -13.08 SS G_CDS: 2.04 Total: -11.04 kcal Total: -87.95 1.57 -86.38 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_12496546.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 147.748 kcal (2) G-P(sol) polarization free energy of solvation -87.947 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.801 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.566 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -86.381 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.367 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds