Wall clock time and date at job start Sun Mar 7 2021 06:24:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46905 * 1 3 3 H 1.00907 * 109.46707 * 2 1 4 4 C 1.46895 * 109.47092 * 120.00051 * 2 1 3 5 5 C 1.46898 * 109.47110 * 240.00479 * 2 1 3 6 6 C 1.53006 * 109.47006 * 174.99627 * 5 2 1 7 7 H 1.09001 * 112.85085 * 316.19592 * 6 5 2 8 8 C 1.53780 * 113.60990 * 87.50264 * 6 5 2 9 9 C 1.53779 * 87.07832 * 139.98388 * 8 6 5 10 10 H 1.09003 * 113.69535 * 89.12605 * 9 8 6 11 11 N 1.46506 * 113.61404 * 220.01749 * 9 8 6 12 12 C 1.34779 * 120.00065 * 252.49954 * 11 9 8 13 13 O 1.21566 * 120.00179 * 359.97438 * 12 11 9 14 14 C 1.47723 * 119.99758 * 179.97438 * 12 11 9 15 15 C 1.39629 * 120.11555 * 179.72251 * 14 12 11 16 16 C 1.37862 * 119.87851 * 179.69601 * 15 14 12 17 17 C 1.50700 * 119.94093 * 180.27608 * 16 15 14 18 18 O 1.42904 * 109.47123 * 15.32319 * 17 16 15 19 19 Si 1.86295 * 109.47101 * 135.32359 * 17 16 15 20 20 C 1.38630 * 120.11917 * 0.60213 * 16 15 14 21 21 F 1.35096 * 119.88600 * 179.69641 * 20 16 15 22 22 C 1.38681 * 120.23764 * 359.67337 * 20 16 15 23 23 C 1.37816 * 120.12127 * 0.02562 * 22 20 16 24 24 C 1.53779 * 113.61334 * 184.99842 * 6 5 2 25 25 H 1.08998 * 109.47037 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.47157 * 299.99565 * 1 2 3 27 27 H 1.08998 * 109.47266 * 59.99652 * 1 2 3 28 28 H 1.09000 * 109.46971 * 179.97438 * 4 2 1 29 29 H 1.09000 * 109.47433 * 300.00215 * 4 2 1 30 30 H 1.08998 * 109.46901 * 60.00258 * 4 2 1 31 31 H 1.09001 * 109.47062 * 54.99882 * 5 2 1 32 32 H 1.08993 * 109.47084 * 294.99329 * 5 2 1 33 33 H 1.09008 * 113.61183 * 254.53053 * 8 6 5 34 34 H 1.08990 * 113.61811 * 25.43244 * 8 6 5 35 35 H 0.96998 * 119.99849 * 72.48886 * 11 9 8 36 36 H 1.08002 * 120.06311 * 359.97438 * 15 14 12 37 37 H 1.09005 * 109.47043 * 255.32574 * 17 16 15 38 38 H 0.96703 * 113.99448 * 60.00034 * 18 17 16 39 39 H 1.48504 * 109.99773 * 58.68385 * 19 17 16 40 40 H 1.48496 * 110.00045 * 179.97438 * 19 17 16 41 41 H 1.08000 * 119.94099 * 180.02562 * 22 20 16 42 42 H 1.07998 * 120.06415 * 180.02562 * 23 22 20 43 43 H 1.08997 * 113.61320 * 334.57072 * 24 6 5 44 44 H 1.08995 * 113.61289 * 105.47446 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9514 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9587 -0.6924 -1.1995 6 6 3.4836 -0.5843 -1.2639 7 1 3.8474 0.4159 -1.0285 8 6 4.2131 -1.7027 -0.5011 9 6 5.2161 -1.7355 -1.6663 10 1 6.0553 -1.0512 -1.5413 11 7 5.6360 -3.0880 -2.0413 12 6 6.8782 -3.5157 -1.7407 13 8 7.6505 -2.7790 -1.1588 14 6 7.3014 -4.8797 -2.1184 15 6 8.5897 -5.3233 -1.8133 16 6 8.9773 -6.5994 -2.1624 17 6 10.3654 -7.0817 -1.8283 18 8 10.9542 -6.2072 -0.8636 19 14 10.2721 -8.8056 -1.1283 20 6 8.0948 -7.4374 -2.8263 21 9 8.4817 -8.6848 -3.1717 22 6 6.8160 -6.9999 -3.1369 23 6 6.4160 -5.7283 -2.7870 24 6 4.0891 -1.1735 -2.5489 25 1 -0.3633 -1.0276 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5139 -0.8899 28 1 3.0487 -0.6929 1.1991 29 1 1.5954 -0.1787 2.0894 30 1 1.5954 -1.7201 1.1993 31 1 1.5241 -0.2328 -2.0872 32 1 1.6705 -1.7426 -1.1558 33 1 4.6501 -1.3746 0.4421 34 1 3.6284 -2.6172 -0.4024 35 1 5.0198 -3.6758 -2.5059 36 1 9.2798 -4.6695 -1.3007 37 1 10.9749 -7.0889 -2.7320 38 1 10.4636 -6.1514 -0.0321 39 1 9.6325 -9.7183 -2.1098 40 1 11.6346 -9.2931 -0.7953 41 1 6.1322 -7.6569 -3.6539 42 1 5.4198 -5.3887 -3.0290 43 1 3.4704 -1.9433 -3.0100 44 1 4.4260 -0.4182 -3.2589 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_12496548.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:24:47 Heat of formation + Delta-G solvation = 57.300616 kcal Electronic energy + Delta-G solvation = -25605.457035 eV Core-core repulsion = 21751.676101 eV Total energy + Delta-G solvation = -3853.780934 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.161 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -50.45261 -42.23055 -41.37410 -40.01768 -38.89613 -37.74222 -34.88451 -32.73551 -31.98497 -30.03677 -29.46544 -27.24728 -26.67163 -26.06017 -25.04743 -23.35697 -23.24309 -21.57820 -20.97736 -19.28886 -19.08126 -18.81918 -18.15362 -17.84585 -17.73737 -17.35803 -17.16438 -16.71605 -16.16188 -16.03355 -15.93564 -15.81051 -15.26390 -15.15182 -14.77600 -14.50775 -14.06773 -13.90973 -13.78169 -13.56112 -13.51019 -13.40423 -13.38014 -13.25492 -13.04302 -12.82862 -12.80252 -12.39950 -12.30019 -11.75591 -11.48655 -11.46559 -11.15954 -10.94567 -10.21208 -10.03585 -9.73149 -5.11810 -0.53376 -0.00026 1.06846 1.15877 1.55225 1.58358 1.92337 2.04463 2.56466 2.93036 2.98470 3.00144 3.21277 3.25212 3.29932 3.38147 3.50278 3.59786 3.66945 3.75977 3.82670 3.96024 4.01485 4.06319 4.19012 4.24587 4.30737 4.37294 4.42979 4.49705 4.57056 4.71388 4.74492 4.77003 4.79611 4.80655 4.87417 4.89298 4.91096 4.98271 4.99802 5.05499 5.10230 5.20465 5.52046 5.59975 6.42828 6.56971 7.11638 Molecular weight = 310.16amu Principal moments of inertia in cm(-1) A = 0.026339 B = 0.002746 C = 0.002674 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1062.806942 B =10193.685325 C =10469.909426 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.370 5.370 3 H 0.438 0.562 4 C -0.058 4.058 5 C 0.012 3.988 6 C -0.118 4.118 7 H 0.124 0.876 8 C -0.151 4.151 9 C 0.094 3.906 10 H 0.085 0.915 11 N -0.700 5.700 12 C 0.562 3.438 13 O -0.577 6.577 14 C -0.153 4.153 15 C -0.031 4.031 16 C -0.159 4.159 17 C -0.070 4.070 18 O -0.551 6.551 19 Si 0.762 3.238 20 C 0.100 3.900 21 F -0.135 7.135 22 C -0.148 4.148 23 C -0.039 4.039 24 C -0.128 4.128 25 H 0.120 0.880 26 H 0.122 0.878 27 H 0.126 0.874 28 H 0.115 0.885 29 H 0.124 0.876 30 H 0.123 0.877 31 H 0.148 0.852 32 H 0.142 0.858 33 H 0.077 0.923 34 H 0.115 0.885 35 H 0.418 0.582 36 H 0.141 0.859 37 H 0.111 0.889 38 H 0.397 0.603 39 H -0.258 1.258 40 H -0.311 1.311 41 H 0.169 0.831 42 H 0.183 0.817 43 H 0.117 0.883 44 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -32.624 19.353 6.734 38.525 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.053 4.947 3 H 0.275 0.725 4 C -0.200 4.200 5 C -0.110 4.110 6 C -0.137 4.137 7 H 0.142 0.858 8 C -0.189 4.189 9 C -0.011 4.011 10 H 0.103 0.897 11 N -0.352 5.352 12 C 0.350 3.650 13 O -0.457 6.457 14 C -0.156 4.156 15 C -0.050 4.050 16 C -0.160 4.160 17 C -0.180 4.180 18 O -0.358 6.358 19 Si 0.667 3.333 20 C 0.081 3.919 21 F -0.113 7.113 22 C -0.167 4.167 23 C -0.057 4.057 24 C -0.167 4.167 25 H 0.139 0.861 26 H 0.141 0.859 27 H 0.145 0.855 28 H 0.134 0.866 29 H 0.143 0.857 30 H 0.142 0.858 31 H 0.166 0.834 32 H 0.160 0.840 33 H 0.096 0.904 34 H 0.133 0.867 35 H 0.257 0.743 36 H 0.158 0.842 37 H 0.128 0.872 38 H 0.247 0.753 39 H -0.183 1.183 40 H -0.240 1.240 41 H 0.187 0.813 42 H 0.200 0.800 43 H 0.135 0.865 44 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -31.534 18.840 6.567 37.316 hybrid contribution 1.145 -0.090 -0.874 1.444 sum -30.389 18.750 5.693 36.158 Atomic orbital electron populations 1.24120 0.75463 1.09541 1.09652 1.44843 1.15969 1.19314 1.14562 0.72532 1.24279 1.05601 1.02746 0.87364 1.23903 0.94754 1.03747 0.88593 1.22699 0.92843 1.00766 0.97396 0.85777 1.23864 0.97297 1.00069 0.97679 1.22749 0.96793 0.83109 0.98399 0.89704 1.45739 1.13253 1.16548 1.59634 1.18268 0.82525 0.86131 0.78087 1.90823 1.54166 1.57486 1.43269 1.20046 0.95552 0.95182 1.04866 1.20917 0.95489 0.93154 0.95458 1.20244 0.97034 0.95459 1.03295 1.24989 0.91555 1.05674 0.95741 1.86495 1.53713 1.67125 1.28517 0.94552 0.80778 0.73232 0.84725 1.18139 0.94924 0.79900 0.98945 1.91559 1.91007 1.38848 1.89932 1.21444 0.94211 0.98447 1.02563 1.21506 1.00227 0.91167 0.92798 1.23348 0.95605 1.01289 0.96437 0.86132 0.85921 0.85544 0.86630 0.85706 0.85820 0.83378 0.84014 0.90389 0.86716 0.74321 0.84178 0.87189 0.75258 1.18330 1.23974 0.81333 0.79988 0.86504 0.90527 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.00 9.19 127.69 1.17 4.18 16 2 N -0.37 24.93 0.66 -948.85 -0.62 24.31 16 3 H 0.44 -30.82 8.41 -89.69 -0.75 -31.57 16 4 C -0.06 3.63 8.57 127.69 1.09 4.72 16 5 C 0.01 -0.76 4.57 86.31 0.39 -0.37 16 6 C -0.12 6.45 3.31 -10.27 -0.03 6.41 16 7 H 0.12 -6.90 8.09 -2.39 -0.02 -6.92 16 8 C -0.15 7.12 5.69 31.12 0.18 7.29 16 9 C 0.09 -3.47 4.24 45.52 0.19 -3.27 16 10 H 0.08 -2.42 7.46 -2.39 -0.02 -2.44 16 11 N -0.70 22.77 5.31 -443.01 -2.35 20.42 16 12 C 0.56 -11.79 7.77 86.75 0.67 -11.12 16 13 O -0.58 6.30 15.94 -3.92 -0.06 6.24 16 14 C -0.15 3.20 5.87 -20.09 -0.12 3.08 16 15 C -0.03 0.49 8.78 22.52 0.20 0.68 16 16 C -0.16 2.31 5.13 -19.86 -0.10 2.21 16 17 C -0.07 0.84 2.96 71.24 0.21 1.05 16 18 O -0.55 6.36 11.64 -148.98 -1.73 4.62 16 19 Si 0.76 -9.11 30.81 68.60 2.11 -7.00 16 20 C 0.10 -1.55 6.67 22.47 0.15 -1.40 16 21 F -0.13 1.40 12.81 44.97 0.58 1.98 16 22 C -0.15 3.35 10.01 22.28 0.22 3.57 16 23 C -0.04 1.05 9.54 22.52 0.21 1.27 16 24 C -0.13 5.89 7.39 31.12 0.23 6.12 16 25 H 0.12 -7.77 8.14 -2.39 -0.02 -7.79 16 26 H 0.12 -7.86 8.14 -2.39 -0.02 -7.88 16 27 H 0.13 -8.24 8.11 -2.39 -0.02 -8.26 16 28 H 0.12 -6.95 5.13 -2.39 -0.01 -6.96 16 29 H 0.12 -7.81 8.14 -2.39 -0.02 -7.83 16 30 H 0.12 -7.78 8.11 -2.39 -0.02 -7.80 16 31 H 0.15 -9.69 8.09 -2.39 -0.02 -9.71 16 32 H 0.14 -9.22 7.79 -2.39 -0.02 -9.24 16 33 H 0.08 -3.46 7.18 -2.38 -0.02 -3.48 16 34 H 0.11 -5.78 7.89 -2.39 -0.02 -5.80 16 35 H 0.42 -16.54 6.76 -92.71 -0.63 -17.17 16 36 H 0.14 -1.79 6.67 -2.91 -0.02 -1.81 16 37 H 0.11 -1.08 7.96 -2.38 -0.02 -1.10 16 38 H 0.40 -7.97 8.44 -74.06 -0.63 -8.60 16 39 H -0.26 1.89 5.27 99.48 0.52 2.41 16 40 H -0.31 0.94 7.11 99.48 0.71 1.64 16 41 H 0.17 -4.54 8.06 -2.91 -0.02 -4.57 16 42 H 0.18 -6.84 6.40 -2.91 -0.02 -6.86 16 43 H 0.12 -5.78 8.08 -2.39 -0.02 -5.80 16 44 H 0.08 -3.19 8.14 -2.39 -0.02 -3.21 16 Total: 1.00 -87.22 350.45 1.49 -85.74 By element: Atomic # 1 Polarization: -159.62 SS G_CDS: -1.11 Total: -160.73 kcal Atomic # 6 Polarization: 19.75 SS G_CDS: 4.68 Total: 24.43 kcal Atomic # 7 Polarization: 47.70 SS G_CDS: -2.97 Total: 44.72 kcal Atomic # 8 Polarization: 12.66 SS G_CDS: -1.80 Total: 10.86 kcal Atomic # 9 Polarization: 1.40 SS G_CDS: 0.58 Total: 1.98 kcal Atomic # 14 Polarization: -9.11 SS G_CDS: 2.11 Total: -7.00 kcal Total: -87.22 1.49 -85.74 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_12496548.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 143.039 kcal (2) G-P(sol) polarization free energy of solvation -87.224 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.815 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.485 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -85.739 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.301 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds