Wall clock time and date at job start Sun Mar 7 2021 06:24:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46906 * 1 3 3 H 1.00897 * 109.46593 * 2 1 4 4 C 1.46897 * 109.46982 * 120.00458 * 2 1 3 5 5 C 1.46896 * 109.46825 * 240.00404 * 2 1 3 6 6 C 1.53005 * 109.47575 * 64.99891 * 5 2 1 7 7 H 1.09002 * 112.84402 * 316.19813 * 6 5 2 8 8 C 1.53780 * 113.61037 * 87.49769 * 6 5 2 9 9 C 1.53782 * 87.07806 * 139.98746 * 8 6 5 10 10 H 1.09000 * 113.69592 * 89.12705 * 9 8 6 11 11 N 1.46500 * 113.61475 * 220.02258 * 9 8 6 12 12 C 1.34778 * 119.99986 * 252.49709 * 11 9 8 13 13 O 1.21281 * 119.99707 * 359.97438 * 12 11 9 14 14 C 1.50699 * 120.00452 * 180.02562 * 12 11 9 15 15 N 1.46495 * 109.47371 * 179.97438 * 14 12 11 16 16 C 1.35041 * 125.93360 * 124.99682 * 15 14 12 17 17 C 1.35085 * 107.98486 * 179.97438 * 16 15 14 18 18 C 1.50695 * 126.07745 * 180.02562 * 17 16 15 19 19 O 1.42898 * 109.47049 * 254.97222 * 18 17 16 20 20 Si 1.86295 * 109.47292 * 14.97450 * 18 17 16 21 21 C 1.40850 * 107.84313 * 359.97438 * 17 16 15 22 22 C 1.48417 * 126.03450 * 179.97438 * 21 17 16 23 23 C 1.39331 * 120.11918 * 324.95816 * 22 21 17 24 24 C 1.38023 * 119.87751 * 180.02562 * 23 22 21 25 25 C 1.38325 * 120.11867 * 359.97438 * 24 23 22 26 26 C 1.38316 * 120.24405 * 0.02562 * 25 24 23 27 27 C 1.38020 * 120.11924 * 359.97438 * 26 25 24 28 28 N 1.31616 * 107.92817 * 0.22546 * 21 17 16 29 29 C 1.53780 * 87.08260 * 334.56542 * 9 8 6 30 30 H 1.09004 * 109.47121 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47251 * 299.99731 * 1 2 3 32 32 H 1.08997 * 109.47188 * 60.00094 * 1 2 3 33 33 H 1.09001 * 109.46894 * 179.97438 * 4 2 1 34 34 H 1.09004 * 109.47119 * 299.99557 * 4 2 1 35 35 H 1.08991 * 109.47520 * 59.99711 * 4 2 1 36 36 H 1.09001 * 109.47283 * 304.99829 * 5 2 1 37 37 H 1.09003 * 109.46815 * 184.99900 * 5 2 1 38 38 H 1.08997 * 113.62056 * 25.43755 * 8 6 5 39 39 H 1.09000 * 113.61326 * 254.52705 * 8 6 5 40 40 H 0.97002 * 120.00825 * 72.48859 * 11 9 8 41 41 H 1.08997 * 109.47204 * 59.99228 * 14 12 11 42 42 H 1.09003 * 109.46494 * 299.99695 * 14 12 11 43 43 H 1.08003 * 126.00348 * 0.02562 * 16 15 14 44 44 H 1.09001 * 109.46962 * 134.97447 * 18 17 16 45 45 H 0.96708 * 113.99833 * 60.00337 * 19 18 17 46 46 H 1.48503 * 110.00258 * 179.97438 * 20 18 17 47 47 H 1.48499 * 110.00090 * 301.32336 * 20 18 17 48 48 H 1.07993 * 120.05790 * 0.04187 * 23 22 21 49 49 H 1.07999 * 119.94158 * 180.27441 * 24 23 22 50 50 H 1.07997 * 119.87723 * 180.02562 * 25 24 23 51 51 H 1.07995 * 119.94240 * 179.97438 * 26 25 24 52 52 H 1.08004 * 120.06520 * 179.97438 * 27 26 25 53 53 H 1.08993 * 113.62031 * 139.98191 * 29 9 8 54 54 H 1.09001 * 113.61598 * 270.80436 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9587 -0.6926 1.1994 5 6 1.9586 -0.6924 -1.1995 6 6 1.5539 0.0978 -2.4456 7 1 0.5237 0.4517 -2.4061 8 6 2.5663 1.1857 -2.8408 9 6 2.3144 0.7784 -4.3022 10 1 1.4930 1.3191 -4.7723 11 7 3.5273 0.7601 -5.1237 12 6 3.7294 1.7195 -6.0484 13 8 2.9069 2.5977 -6.2008 14 6 4.9767 1.7004 -6.8939 15 7 4.9597 2.8393 -7.8152 16 6 5.9255 3.7753 -7.9362 17 6 5.5396 4.6522 -8.8885 18 6 6.3151 5.8589 -9.3504 19 8 5.7173 7.0421 -8.8170 20 14 8.0759 5.7304 -8.7558 21 6 4.2840 4.2375 -9.3737 22 6 3.4897 4.9130 -10.4299 23 6 3.5055 6.3022 -10.5359 24 6 2.7645 6.9252 -11.5196 25 6 2.0075 6.1730 -12.3997 26 6 1.9881 4.7936 -12.2990 27 6 2.7254 4.1603 -11.3190 28 7 3.9371 3.1483 -8.7214 29 6 1.9135 -0.6056 -3.7649 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 3.0487 -0.6930 1.1991 34 1 1.5954 -0.1788 2.0894 35 1 1.5954 -1.7202 1.1994 36 1 1.5240 -1.6910 -1.2454 37 1 3.0450 -0.7706 -1.1558 38 1 3.5813 0.9824 -2.4996 39 1 2.2343 2.1971 -2.6061 40 1 4.1851 0.0576 -5.0020 41 1 5.0148 0.7725 -7.4645 42 1 5.8534 1.7670 -6.2496 43 1 6.8452 3.8152 -7.3714 44 1 6.3017 5.9043 -10.4394 45 1 5.6950 7.0701 -7.8505 46 1 8.8516 6.9143 -9.2054 47 1 8.1061 5.6355 -7.2742 48 1 4.0967 6.8903 -9.8497 49 1 2.7795 8.0017 -11.6055 50 1 1.4295 6.6645 -13.1682 51 1 1.3951 4.2111 -12.9884 52 1 2.7093 3.0832 -11.2409 53 1 1.0547 -1.0404 -4.2761 54 1 2.7499 -1.2992 -3.6776 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_12622748.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:24:51 Heat of formation + Delta-G solvation = 178.520788 kcal Electronic energy + Delta-G solvation = -33451.353622 eV Core-core repulsion = 29090.140064 eV Total energy + Delta-G solvation = -4361.213558 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.207 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.53685 -42.18424 -40.88233 -39.83417 -39.09913 -37.92137 -34.95454 -34.61299 -32.36355 -31.92457 -31.47111 -30.24235 -29.42043 -28.68367 -26.88851 -26.17824 -25.69372 -24.47452 -23.56901 -23.38193 -21.89445 -21.53355 -21.12107 -20.75852 -19.33426 -18.80809 -18.38526 -17.94446 -17.82352 -17.45651 -17.07960 -16.77296 -16.67674 -16.28527 -16.22047 -16.03847 -15.87404 -15.51529 -15.37894 -14.91840 -14.69020 -14.51464 -14.30936 -14.17394 -13.87381 -13.82886 -13.69355 -13.60695 -13.51148 -13.45005 -13.35199 -13.27089 -13.19858 -12.93950 -12.58471 -12.42651 -12.25943 -12.17674 -11.79502 -11.72503 -11.64679 -11.54820 -11.29451 -10.68185 -10.43884 -10.14533 -9.90891 -9.78842 -9.31523 -4.86072 0.03302 0.44012 0.79170 1.00315 1.27344 1.40398 1.42358 1.59569 1.67454 2.04985 2.08814 2.86644 2.89135 2.94579 3.14459 3.31971 3.37035 3.40614 3.43937 3.58946 3.66511 3.70169 3.75450 3.83229 3.92317 3.99656 4.09860 4.10834 4.14347 4.16278 4.23400 4.30469 4.33159 4.33718 4.43703 4.48370 4.49423 4.57902 4.64553 4.67815 4.68797 4.76881 4.77734 4.83553 4.84728 4.86661 4.91823 4.96870 5.01927 5.14185 5.15326 5.27906 5.48828 5.53623 5.58174 5.60877 5.89692 6.02203 6.42196 6.54952 6.58611 7.13997 Molecular weight = 372.21amu Principal moments of inertia in cm(-1) A = 0.011452 B = 0.001956 C = 0.001790 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2444.354210 B =14314.470024 C =15637.860331 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.373 5.373 3 H 0.436 0.564 4 C -0.046 4.046 5 C 0.013 3.987 6 C -0.122 4.122 7 H 0.120 0.880 8 C -0.148 4.148 9 C 0.097 3.903 10 H 0.073 0.927 11 N -0.702 5.702 12 C 0.495 3.505 13 O -0.569 6.569 14 C 0.104 3.896 15 N -0.358 5.358 16 C 0.077 3.923 17 C -0.262 4.262 18 C -0.053 4.053 19 O -0.547 6.547 20 Si 0.783 3.217 21 C 0.110 3.890 22 C -0.037 4.037 23 C -0.113 4.113 24 C -0.133 4.133 25 C -0.118 4.118 26 C -0.131 4.131 27 C -0.107 4.107 28 N -0.292 5.292 29 C -0.125 4.125 30 H 0.124 0.876 31 H 0.125 0.875 32 H 0.116 0.884 33 H 0.128 0.872 34 H 0.123 0.877 35 H 0.121 0.879 36 H 0.144 0.856 37 H 0.150 0.850 38 H 0.118 0.882 39 H 0.067 0.933 40 H 0.423 0.577 41 H 0.140 0.860 42 H 0.180 0.820 43 H 0.221 0.779 44 H 0.101 0.899 45 H 0.384 0.616 46 H -0.313 1.313 47 H -0.254 1.254 48 H 0.152 0.848 49 H 0.138 0.862 50 H 0.142 0.858 51 H 0.141 0.859 52 H 0.121 0.879 53 H 0.073 0.927 54 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.152 -22.798 36.723 43.423 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 N 0.051 4.949 3 H 0.272 0.728 4 C -0.188 4.188 5 C -0.109 4.109 6 C -0.141 4.141 7 H 0.138 0.862 8 C -0.187 4.187 9 C -0.008 4.008 10 H 0.091 0.909 11 N -0.356 5.356 12 C 0.280 3.720 13 O -0.446 6.446 14 C -0.019 4.019 15 N -0.140 5.140 16 C -0.069 4.069 17 C -0.274 4.274 18 C -0.162 4.162 19 O -0.355 6.355 20 Si 0.686 3.314 21 C -0.054 4.054 22 C -0.039 4.039 23 C -0.132 4.132 24 C -0.151 4.151 25 C -0.137 4.137 26 C -0.149 4.149 27 C -0.127 4.127 28 N -0.114 5.114 29 C -0.164 4.164 30 H 0.143 0.857 31 H 0.144 0.856 32 H 0.134 0.866 33 H 0.146 0.854 34 H 0.141 0.859 35 H 0.140 0.860 36 H 0.162 0.838 37 H 0.168 0.832 38 H 0.136 0.864 39 H 0.086 0.914 40 H 0.262 0.738 41 H 0.158 0.842 42 H 0.197 0.803 43 H 0.237 0.763 44 H 0.119 0.881 45 H 0.233 0.767 46 H -0.241 1.241 47 H -0.179 1.179 48 H 0.169 0.831 49 H 0.156 0.844 50 H 0.160 0.840 51 H 0.159 0.841 52 H 0.139 0.861 53 H 0.091 0.909 54 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -5.150 -23.030 36.779 43.699 hybrid contribution -0.352 1.599 -0.112 1.641 sum -5.502 -21.431 36.667 42.826 Atomic orbital electron populations 1.24186 0.76552 1.09712 1.09260 1.44819 1.15744 1.19507 1.14856 0.72811 1.24142 1.05853 1.02368 0.86411 1.23906 1.06132 0.99428 0.81451 1.22767 1.01271 0.96568 0.93460 0.86236 1.23726 1.01292 0.99420 0.94254 1.22597 0.87563 0.99744 0.90924 0.90876 1.45727 1.23969 1.28895 1.37003 1.21065 0.88146 0.82023 0.80729 1.90847 1.46961 1.38231 1.68552 1.22076 0.99447 0.88813 0.91577 1.48156 1.13853 1.22199 1.29810 1.22819 0.95955 0.89233 0.98850 1.20536 0.98075 1.03388 1.05366 1.24614 1.07439 0.81573 1.02541 1.86477 1.81475 1.40730 1.26817 0.94070 0.72129 0.86157 0.79067 1.20781 0.94511 0.93914 0.96231 1.18044 0.98117 0.93123 0.94646 1.21994 0.98619 0.93541 0.99015 1.21409 0.97223 1.01001 0.95459 1.21584 0.98676 0.94188 0.99215 1.21353 0.99642 0.95236 0.98668 1.21311 0.96314 0.99904 0.95131 1.77666 1.10818 1.17257 1.05645 1.23334 1.03369 0.95161 0.94509 0.85749 0.85612 0.86576 0.85368 0.85871 0.86033 0.83819 0.83228 0.86359 0.91404 0.73801 0.84205 0.80290 0.76314 0.88102 0.76679 1.24124 1.17924 0.83063 0.84448 0.84014 0.84085 0.86138 0.90858 0.86103 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.43 8.98 127.69 1.15 4.58 16 2 N -0.37 24.77 0.66 -948.84 -0.62 24.14 16 3 H 0.44 -29.90 8.44 -89.70 -0.76 -30.66 16 4 C -0.05 2.99 9.19 127.69 1.17 4.17 16 5 C 0.01 -0.80 4.48 86.31 0.39 -0.41 16 6 C -0.12 6.47 3.58 -10.27 -0.04 6.43 16 7 H 0.12 -6.36 6.10 -2.39 -0.01 -6.38 16 8 C -0.15 6.77 7.43 31.12 0.23 7.00 16 9 C 0.10 -3.42 4.24 45.52 0.19 -3.23 16 10 H 0.07 -1.83 7.46 -2.39 -0.02 -1.85 16 11 N -0.70 23.38 5.35 -440.04 -2.36 21.03 16 12 C 0.50 -10.89 7.86 87.66 0.69 -10.20 16 13 O -0.57 4.56 15.29 -3.03 -0.05 4.51 16 14 C 0.10 -2.76 6.99 85.63 0.60 -2.17 16 15 N -0.36 5.25 3.40 -351.92 -1.20 4.05 16 16 C 0.08 -1.31 9.96 83.47 0.83 -0.48 16 17 C -0.26 2.68 5.34 -19.95 -0.11 2.57 16 18 C -0.05 0.60 2.00 71.23 0.14 0.74 16 19 O -0.55 4.90 10.10 -148.98 -1.50 3.40 16 20 Si 0.78 -12.89 30.80 68.60 2.11 -10.77 16 21 C 0.11 -0.38 6.74 42.53 0.29 -0.09 16 22 C -0.04 0.05 5.80 -20.04 -0.12 -0.07 16 23 C -0.11 0.24 8.94 22.48 0.20 0.44 16 24 C -0.13 0.55 10.03 22.24 0.22 0.77 16 25 C -0.12 0.64 10.04 22.31 0.22 0.87 16 26 C -0.13 0.64 10.03 22.24 0.22 0.86 16 27 C -0.11 0.25 9.75 22.48 0.22 0.47 16 28 N -0.29 1.19 11.63 -48.16 -0.56 0.63 16 29 C -0.13 5.61 7.39 31.12 0.23 5.84 16 30 H 0.12 -7.73 8.11 -2.38 -0.02 -7.75 16 31 H 0.13 -7.81 8.14 -2.39 -0.02 -7.83 16 32 H 0.12 -7.03 6.10 -2.39 -0.01 -7.04 16 33 H 0.13 -8.37 8.11 -2.39 -0.02 -8.39 16 34 H 0.12 -7.85 8.14 -2.38 -0.02 -7.87 16 35 H 0.12 -7.78 8.14 -2.39 -0.02 -7.80 16 36 H 0.14 -9.18 8.09 -2.39 -0.02 -9.20 16 37 H 0.15 -9.81 7.79 -2.39 -0.02 -9.83 16 38 H 0.12 -5.88 7.90 -2.39 -0.02 -5.90 16 39 H 0.07 -2.79 8.14 -2.39 -0.02 -2.81 16 40 H 0.42 -17.60 8.73 -92.71 -0.81 -18.41 16 41 H 0.14 -4.27 8.14 -2.39 -0.02 -4.29 16 42 H 0.18 -6.72 8.07 -2.39 -0.02 -6.74 16 43 H 0.22 -5.85 6.33 -2.91 -0.02 -5.87 16 44 H 0.10 -0.89 7.84 -2.39 -0.02 -0.91 16 45 H 0.38 -5.81 8.70 -74.05 -0.64 -6.46 16 46 H -0.31 2.02 7.11 99.48 0.71 2.73 16 47 H -0.25 4.47 6.99 99.48 0.70 5.17 16 48 H 0.15 -0.41 4.50 -2.91 -0.01 -0.42 16 49 H 0.14 -1.06 8.06 -2.91 -0.02 -1.08 16 50 H 0.14 -1.41 8.06 -2.91 -0.02 -1.43 16 51 H 0.14 -1.31 8.06 -2.91 -0.02 -1.33 16 52 H 0.12 -0.39 8.06 -2.91 -0.02 -0.41 16 53 H 0.07 -2.93 8.14 -2.39 -0.02 -2.95 16 54 H 0.12 -5.92 8.08 -2.39 -0.02 -5.93 16 Total: 1.00 -97.88 431.53 1.31 -96.56 By element: Atomic # 1 Polarization: -160.39 SS G_CDS: -1.25 Total: -161.64 kcal Atomic # 6 Polarization: 11.35 SS G_CDS: 6.74 Total: 18.09 kcal Atomic # 7 Polarization: 54.59 SS G_CDS: -4.74 Total: 49.85 kcal Atomic # 8 Polarization: 9.46 SS G_CDS: -1.55 Total: 7.91 kcal Atomic # 14 Polarization: -12.89 SS G_CDS: 2.11 Total: -10.77 kcal Total: -97.88 1.31 -96.56 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_12622748.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 275.084 kcal (2) G-P(sol) polarization free energy of solvation -97.878 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 177.206 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -96.563 kcal (6) G-S(sol) free energy of system = (1) + (5) 178.521 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds