Wall clock time and date at job start Sun Mar 7 2021 06:25:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 H 1.00901 * 109.47215 * 2 1 4 4 C 1.46902 * 109.46688 * 240.00130 * 2 1 3 5 5 C 1.46901 * 109.47230 * 120.00743 * 2 1 3 6 6 C 1.52998 * 109.46683 * 184.99843 * 5 2 1 7 7 H 1.08990 * 112.85610 * 43.80145 * 6 5 2 8 8 C 1.53791 * 113.61063 * 175.00176 * 6 5 2 9 9 C 1.53779 * 87.08248 * 139.97997 * 8 6 5 10 10 H 1.08994 * 113.61785 * 89.11476 * 9 8 6 11 11 N 1.46502 * 113.61155 * 220.02003 * 9 8 6 12 12 C 1.34776 * 119.99618 * 204.99959 * 11 9 8 13 13 O 1.21626 * 120.00299 * 359.97438 * 12 11 9 14 14 C 1.47295 * 119.99767 * 179.97438 * 12 11 9 15 15 C 1.40373 * 120.04621 * 179.71789 * 14 12 11 16 16 O 1.35673 * 120.13506 * 0.02562 * 15 14 12 17 17 C 1.38316 * 119.72256 * 179.74911 * 15 14 12 18 18 C 1.39568 * 119.81465 * 0.55392 * 17 15 14 19 19 C 1.47567 * 119.95343 * 179.72361 * 18 17 15 20 20 C 1.36110 * 125.94096 * 179.97438 * 19 18 17 21 21 C 1.40796 * 106.73326 * 179.97438 * 20 19 18 22 22 C 1.34840 * 107.05153 * 359.97438 * 21 20 19 23 23 C 1.50695 * 125.65726 * 180.02562 * 22 21 20 24 24 O 1.42906 * 109.46838 * 65.00149 * 23 22 21 25 25 Si 1.86296 * 109.47399 * 185.00031 * 23 22 21 26 26 O 1.34238 * 108.68783 * 359.75687 * 22 21 20 27 27 C 1.39963 * 120.08820 * 359.70148 * 18 17 15 28 28 C 1.36386 * 120.27643 * 0.02562 * 27 18 17 29 29 C 1.53781 * 87.08140 * 334.56433 * 9 8 6 30 30 H 1.09002 * 109.47742 * 179.97438 * 1 2 3 31 31 H 1.09004 * 109.46736 * 299.99613 * 1 2 3 32 32 H 1.09000 * 109.47357 * 59.99578 * 1 2 3 33 33 H 1.09001 * 109.47165 * 179.97438 * 4 2 1 34 34 H 1.08992 * 109.47412 * 300.00019 * 4 2 1 35 35 H 1.09004 * 109.46739 * 60.00523 * 4 2 1 36 36 H 1.08995 * 109.46814 * 304.99109 * 5 2 1 37 37 H 1.08993 * 109.46905 * 64.99501 * 5 2 1 38 38 H 1.09001 * 113.60623 * 254.52750 * 8 6 5 39 39 H 1.08996 * 113.61696 * 25.42583 * 8 6 5 40 40 H 0.97000 * 120.00447 * 24.99366 * 11 9 8 41 41 H 0.96704 * 114.00332 * 89.99856 * 16 15 14 42 42 H 1.07996 * 120.09343 * 180.27488 * 17 15 14 43 43 H 1.07996 * 126.63633 * 359.97087 * 20 19 18 44 44 H 1.08000 * 126.47610 * 179.97438 * 21 20 19 45 45 H 1.08998 * 109.47303 * 305.00670 * 23 22 21 46 46 H 0.96695 * 113.99763 * 60.00297 * 24 23 22 47 47 H 1.48501 * 109.99813 * 58.68258 * 25 23 22 48 48 H 1.48496 * 110.00058 * 179.97438 * 25 23 22 49 49 H 1.07996 * 119.85821 * 179.97438 * 27 18 17 50 50 H 1.08001 * 119.90127 * 179.97438 * 28 27 18 51 51 H 1.08997 * 113.61644 * 270.88666 * 29 9 8 52 52 H 1.09001 * 113.61420 * 139.98339 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9585 -0.6925 -1.1995 5 6 1.9587 -0.6926 1.1993 6 6 3.4835 -0.5847 1.2637 7 1 3.8473 0.4154 1.0284 8 6 4.0891 -1.1741 2.5485 9 6 5.2160 -1.7361 1.6659 10 1 6.0545 -1.0513 1.5398 11 7 5.6357 -3.0887 2.0407 12 6 6.8779 -3.5164 1.7400 13 8 7.6503 -2.7795 1.1571 14 6 7.3001 -4.8762 2.1172 15 6 8.5917 -5.3247 1.7993 16 8 9.4546 -4.5076 1.1446 17 6 8.9829 -6.6010 2.1613 18 6 8.0878 -7.4378 2.8295 19 6 8.5000 -8.8023 3.2118 20 6 7.7302 -9.7162 3.8636 21 6 8.5187 -10.8721 4.0205 22 6 9.7182 -10.6112 3.4627 23 6 10.8827 -11.5655 3.3969 24 8 10.5365 -12.6834 2.5768 25 14 12.3593 -10.6942 2.6680 26 8 9.7012 -9.3624 2.9704 27 6 6.8001 -6.9845 3.1378 28 6 6.4123 -5.7247 2.7875 29 6 4.2130 -1.7030 0.5007 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8901 32 1 -0.3634 0.5139 -0.8899 33 1 3.0485 -0.6921 -1.1998 34 1 1.5952 -1.7201 -1.1995 35 1 1.5952 -0.1785 -2.0894 36 1 1.5242 -0.2331 2.0871 37 1 1.6702 -1.7428 1.1556 38 1 4.4260 -0.4189 3.2586 39 1 3.4704 -1.9440 3.0096 40 1 5.0196 -3.6765 2.5052 41 1 10.0016 -3.9643 1.7283 42 1 9.9767 -6.9506 1.9237 43 1 6.7117 -9.5809 4.1961 44 1 8.2193 -11.7936 4.4976 45 1 11.1249 -11.9129 4.4012 46 1 10.3087 -12.4482 1.6670 47 1 12.7097 -9.5110 3.4942 48 1 13.5146 -11.6246 2.5984 49 1 6.1103 -7.6353 3.6546 50 1 5.4170 -5.3813 3.0281 51 1 3.6282 -2.6175 0.4019 52 1 4.6500 -1.3749 -0.4424 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_12807986.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:25:02 Heat of formation + Delta-G solvation = 72.267353 kcal Electronic energy + Delta-G solvation = -33254.955130 eV Core-core repulsion = 28693.696753 eV Total energy + Delta-G solvation = -4561.258377 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.185 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -43.78112 -42.24587 -41.52302 -40.10123 -38.79732 -38.11901 -37.85509 -34.91083 -34.23289 -33.26437 -31.35468 -30.66288 -29.91757 -29.47482 -27.20620 -26.67200 -25.82116 -24.70841 -24.10047 -23.51637 -22.42066 -21.93104 -21.36780 -21.05840 -19.72053 -19.07314 -18.73256 -18.56574 -18.04910 -17.71080 -17.53278 -17.42727 -17.01369 -16.64468 -16.38039 -16.16942 -16.04418 -15.81529 -15.77626 -15.44166 -14.82392 -14.49644 -14.43662 -14.34449 -14.02535 -13.92346 -13.88872 -13.65449 -13.57008 -13.53710 -13.47974 -13.37508 -13.26619 -13.05871 -12.87049 -12.83860 -12.72846 -12.31372 -12.29188 -11.93576 -11.74942 -11.47332 -11.16621 -10.92792 -10.77131 -10.62291 -10.07713 -9.97575 -9.04827 -5.10519 -0.82395 0.11714 0.60727 1.05654 1.08804 1.35991 1.42471 1.69303 1.83804 1.89108 2.07153 2.60983 2.91493 2.99071 2.99416 3.22966 3.25908 3.36498 3.38365 3.48999 3.58530 3.64734 3.75365 3.82312 3.83235 3.95383 3.98494 4.00238 4.18055 4.18763 4.23157 4.27162 4.35558 4.37835 4.42321 4.49515 4.60262 4.65783 4.69551 4.72677 4.75417 4.77934 4.79236 4.86036 4.87126 4.90367 4.96867 5.02334 5.07736 5.08797 5.18346 5.21789 5.39085 5.50109 5.55483 5.93023 6.45752 6.55763 6.64747 7.16597 Molecular weight = 374.18amu Principal moments of inertia in cm(-1) A = 0.019266 B = 0.001602 C = 0.001536 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1452.972142 B =17479.391346 C =18225.056644 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.370 5.370 3 H 0.438 0.562 4 C -0.057 4.057 5 C 0.012 3.988 6 C -0.117 4.117 7 H 0.124 0.876 8 C -0.126 4.126 9 C 0.095 3.905 10 H 0.084 0.916 11 N -0.702 5.702 12 C 0.558 3.442 13 O -0.565 6.565 14 C -0.181 4.181 15 C 0.157 3.843 16 O -0.496 6.496 17 C -0.158 4.158 18 C 0.024 3.976 19 C 0.003 3.997 20 C -0.171 4.171 21 C -0.185 4.185 22 C -0.053 4.053 23 C -0.025 4.025 24 O -0.541 6.541 25 Si 0.769 3.231 26 O -0.175 6.175 27 C -0.112 4.112 28 C -0.046 4.046 29 C -0.154 4.154 30 H 0.120 0.880 31 H 0.128 0.872 32 H 0.123 0.877 33 H 0.114 0.886 34 H 0.122 0.878 35 H 0.125 0.875 36 H 0.150 0.850 37 H 0.141 0.859 38 H 0.078 0.922 39 H 0.117 0.883 40 H 0.416 0.584 41 H 0.407 0.593 42 H 0.133 0.867 43 H 0.185 0.815 44 H 0.163 0.837 45 H 0.137 0.863 46 H 0.399 0.601 47 H -0.294 1.294 48 H -0.282 1.282 49 H 0.168 0.832 50 H 0.182 0.818 51 H 0.112 0.888 52 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -34.167 25.450 -6.714 43.130 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.053 4.947 3 H 0.275 0.725 4 C -0.200 4.200 5 C -0.110 4.110 6 C -0.136 4.136 7 H 0.142 0.858 8 C -0.165 4.165 9 C -0.010 4.010 10 H 0.102 0.898 11 N -0.355 5.355 12 C 0.346 3.654 13 O -0.445 6.445 14 C -0.185 4.185 15 C 0.111 3.889 16 O -0.309 6.309 17 C -0.177 4.177 18 C 0.024 3.976 19 C -0.047 4.047 20 C -0.190 4.190 21 C -0.204 4.204 22 C -0.103 4.103 23 C -0.136 4.136 24 O -0.349 6.349 25 Si 0.674 3.326 26 O -0.073 6.073 27 C -0.130 4.130 28 C -0.065 4.065 29 C -0.192 4.192 30 H 0.138 0.862 31 H 0.146 0.854 32 H 0.141 0.859 33 H 0.132 0.868 34 H 0.141 0.859 35 H 0.144 0.856 36 H 0.168 0.832 37 H 0.159 0.841 38 H 0.096 0.904 39 H 0.135 0.865 40 H 0.255 0.745 41 H 0.267 0.733 42 H 0.151 0.849 43 H 0.202 0.798 44 H 0.181 0.819 45 H 0.154 0.846 46 H 0.250 0.750 47 H -0.221 1.221 48 H -0.208 1.208 49 H 0.186 0.814 50 H 0.199 0.801 51 H 0.131 0.869 52 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -32.787 25.573 -7.120 42.186 hybrid contribution 0.810 -0.239 1.110 1.395 sum -31.977 25.334 -6.010 41.237 Atomic orbital electron populations 1.24128 0.75377 1.09554 1.09723 1.44844 1.16036 1.19291 1.14523 0.72524 1.24267 1.05525 1.02729 0.87443 1.23907 0.94706 1.03741 0.88636 1.22690 0.92868 1.00627 0.97376 0.85782 1.23339 0.95503 1.01266 0.96367 1.22715 0.96746 0.83190 0.98302 0.89770 1.45736 1.13302 1.16487 1.59963 1.18150 0.82730 0.86123 0.78424 1.90842 1.54027 1.57289 1.42322 1.20591 0.96051 0.95988 1.05860 1.18542 0.89578 0.89743 0.91070 1.84728 1.53757 1.56620 1.35818 1.21613 1.01267 0.94202 1.00586 1.17984 0.94773 0.87904 0.96987 1.20695 0.84204 0.94688 1.05078 1.22235 1.02345 0.92110 1.02297 1.21851 0.93243 1.01108 1.04245 1.23177 0.99907 0.84511 1.02746 1.24395 1.00024 0.88598 1.00560 1.86546 1.90678 1.30400 1.27274 0.93435 0.74427 0.75894 0.88864 1.83925 1.34327 1.25815 1.63228 1.21098 0.93918 0.97198 1.00770 1.21177 0.99868 0.91908 0.93497 1.23874 0.97494 1.00092 0.97726 0.86155 0.85405 0.85900 0.86790 0.85898 0.85647 0.83187 0.84078 0.90354 0.86492 0.74471 0.73274 0.84948 0.79788 0.81906 0.84579 0.75011 1.22108 1.20799 0.81419 0.80128 0.86940 0.90720 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.98 9.19 127.69 1.17 4.16 16 2 N -0.37 24.62 0.66 -948.86 -0.62 23.99 16 3 H 0.44 -30.49 8.41 -89.69 -0.75 -31.24 16 4 C -0.06 3.54 8.57 127.69 1.09 4.63 16 5 C 0.01 -0.76 4.57 86.30 0.39 -0.36 16 6 C -0.12 6.24 3.31 -10.26 -0.03 6.21 16 7 H 0.12 -6.77 8.09 -2.39 -0.02 -6.79 16 8 C -0.13 5.69 7.39 31.12 0.23 5.92 16 9 C 0.10 -3.36 4.24 45.52 0.19 -3.17 16 10 H 0.08 -2.28 7.46 -2.39 -0.02 -2.30 16 11 N -0.70 21.51 5.30 -443.42 -2.35 19.16 16 12 C 0.56 -10.35 7.75 86.63 0.67 -9.68 16 13 O -0.57 5.00 14.74 16.88 0.25 5.25 16 14 C -0.18 3.30 5.89 -19.97 -0.12 3.19 16 15 C 0.16 -1.93 6.71 22.81 0.15 -1.77 16 16 O -0.50 4.56 11.56 -68.90 -0.80 3.76 16 17 C -0.16 1.92 9.65 22.61 0.22 2.14 16 18 C 0.02 -0.36 5.87 -20.08 -0.12 -0.48 16 19 C 0.00 -0.03 7.02 24.24 0.17 0.14 16 20 C -0.17 2.51 10.26 22.40 0.23 2.74 16 21 C -0.19 2.17 10.78 22.11 0.24 2.41 16 22 C -0.05 0.55 6.20 24.90 0.15 0.70 16 23 C -0.02 0.29 2.98 71.23 0.21 0.50 16 24 O -0.54 6.16 12.88 -148.98 -1.92 4.24 16 25 Si 0.77 -8.21 32.11 68.60 2.20 -6.01 16 26 O -0.18 1.60 8.79 -6.01 -0.05 1.55 16 27 C -0.11 2.53 9.49 22.26 0.21 2.74 16 28 C -0.05 1.19 9.47 22.24 0.21 1.40 16 29 C -0.15 6.95 5.69 31.12 0.18 7.13 16 30 H 0.12 -7.68 8.14 -2.39 -0.02 -7.70 16 31 H 0.13 -8.29 8.11 -2.38 -0.02 -8.31 16 32 H 0.12 -7.81 8.14 -2.39 -0.02 -7.83 16 33 H 0.11 -6.67 5.13 -2.39 -0.01 -6.68 16 34 H 0.12 -7.56 8.11 -2.39 -0.02 -7.58 16 35 H 0.13 -7.72 8.14 -2.39 -0.02 -7.74 16 36 H 0.15 -9.75 8.09 -2.39 -0.02 -9.77 16 37 H 0.14 -9.04 7.79 -2.39 -0.02 -9.06 16 38 H 0.08 -3.23 8.14 -2.39 -0.02 -3.25 16 39 H 0.12 -5.69 8.08 -2.39 -0.02 -5.71 16 40 H 0.42 -15.73 6.73 -92.71 -0.62 -16.35 16 41 H 0.41 -6.31 9.06 -74.05 -0.67 -6.98 16 42 H 0.13 -1.44 7.89 -2.91 -0.02 -1.46 16 43 H 0.18 -4.00 7.24 -2.91 -0.02 -4.02 16 44 H 0.16 -2.23 8.06 -2.91 -0.02 -2.25 16 45 H 0.14 -1.66 7.96 -2.39 -0.02 -1.67 16 46 H 0.40 -7.61 8.70 -74.06 -0.64 -8.25 16 47 H -0.29 1.18 7.11 99.48 0.71 1.89 16 48 H -0.28 1.29 7.11 99.48 0.71 2.00 16 49 H 0.17 -4.78 6.95 -2.91 -0.02 -4.80 16 50 H 0.18 -6.56 6.38 -2.91 -0.02 -6.57 16 51 H 0.11 -5.42 7.90 -2.39 -0.02 -5.44 16 52 H 0.07 -3.14 7.18 -2.39 -0.02 -3.15 16 Total: 1.00 -91.06 421.19 0.51 -90.55 By element: Atomic # 1 Polarization: -169.38 SS G_CDS: -1.66 Total: -171.05 kcal Atomic # 6 Polarization: 23.09 SS G_CDS: 5.46 Total: 28.55 kcal Atomic # 7 Polarization: 46.13 SS G_CDS: -2.98 Total: 43.16 kcal Atomic # 8 Polarization: 17.31 SS G_CDS: -2.52 Total: 14.79 kcal Atomic # 14 Polarization: -8.21 SS G_CDS: 2.20 Total: -6.01 kcal Total: -91.06 0.51 -90.55 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_12807986.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 162.820 kcal (2) G-P(sol) polarization free energy of solvation -91.059 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.761 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.507 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -90.552 kcal (6) G-S(sol) free energy of system = (1) + (5) 72.267 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds