Wall clock time and date at job start Sun Mar 7 2021 06:25:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 H 1.00904 * 109.47122 * 2 1 4 4 C 1.46897 * 109.47472 * 119.99952 * 2 1 3 5 5 C 1.46898 * 109.47102 * 240.00181 * 2 1 3 6 6 C 1.53011 * 109.46965 * 174.99710 * 5 2 1 7 7 H 1.08997 * 112.84822 * 43.80208 * 6 5 2 8 8 C 1.53777 * 113.61229 * 174.99821 * 6 5 2 9 9 C 1.53782 * 87.08162 * 139.98273 * 8 6 5 10 10 H 1.08992 * 113.61510 * 89.19741 * 9 8 6 11 11 N 1.46495 * 113.61155 * 220.01949 * 9 8 6 12 12 C 1.34782 * 119.99946 * 203.46697 * 11 9 8 13 13 O 1.21654 * 119.99478 * 0.02562 * 12 11 9 14 14 C 1.47056 * 120.00473 * 180.02562 * 12 11 9 15 15 C 1.35859 * 125.42815 * 179.97438 * 14 12 11 16 16 C 1.41593 * 107.72847 * 180.02562 * 15 14 12 17 17 C 1.40068 * 133.38445 * 180.02562 * 16 15 14 18 18 C 1.36468 * 119.83035 * 179.97438 * 17 16 15 19 19 C 1.38897 * 120.61856 * 359.97011 * 18 17 16 20 20 C 1.50696 * 119.67454 * 179.97438 * 19 18 17 21 21 O 1.42905 * 109.47144 * 120.02309 * 20 19 18 22 22 Si 1.86296 * 109.47499 * 0.02562 * 20 19 18 23 23 C 1.37710 * 120.64488 * 0.02562 * 19 18 17 24 24 C 1.39178 * 119.81120 * 0.02562 * 23 19 18 25 25 N 1.37495 * 133.18453 * 180.02562 * 24 23 19 26 26 C 1.53782 * 87.17079 * 334.60677 * 9 8 6 27 27 H 1.09000 * 109.47025 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.46985 * 300.00127 * 1 2 3 29 29 H 1.08998 * 109.47182 * 59.99651 * 1 2 3 30 30 H 1.09000 * 109.47231 * 59.99838 * 4 2 1 31 31 H 1.09004 * 109.47469 * 180.02562 * 4 2 1 32 32 H 1.09003 * 109.46951 * 299.99941 * 4 2 1 33 33 H 1.08992 * 109.47340 * 55.00080 * 5 2 1 34 34 H 1.08992 * 109.47221 * 294.99632 * 5 2 1 35 35 H 1.09001 * 113.61331 * 25.43390 * 8 6 5 36 36 H 1.08998 * 113.69245 * 254.54614 * 8 6 5 37 37 H 0.97000 * 120.00396 * 23.47615 * 11 9 8 38 38 H 1.07993 * 126.13624 * 0.04311 * 15 14 12 39 39 H 1.07997 * 120.07962 * 359.95788 * 17 16 15 40 40 H 1.08004 * 119.69024 * 179.97438 * 18 17 16 41 41 H 1.09001 * 109.47035 * 240.01821 * 20 19 18 42 42 H 0.96703 * 113.99840 * 299.99566 * 21 20 19 43 43 H 1.48498 * 109.99894 * 58.68201 * 22 20 19 44 44 H 1.48502 * 109.99962 * 179.97438 * 22 20 19 45 45 H 1.08005 * 120.09016 * 179.97438 * 23 19 18 46 46 H 0.96994 * 125.60764 * 0.24342 * 25 24 23 47 47 H 1.09002 * 113.61377 * 139.93857 * 26 9 8 48 48 H 1.08997 * 113.61920 * 270.83912 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9586 -0.6924 -1.1994 6 6 3.4835 -0.5844 -1.2639 7 1 3.9616 -0.7637 -0.3009 8 6 4.1092 -1.3819 -2.4203 9 6 5.0667 -0.1947 -2.6169 10 1 5.9792 -0.2671 -2.0251 11 7 5.3244 0.1246 -4.0232 12 6 6.4500 0.7798 -4.3701 13 8 7.2521 1.1055 -3.5154 14 6 6.7086 1.1009 -5.7817 15 6 7.8020 1.7551 -6.2531 16 6 7.6675 1.8626 -7.6585 17 6 8.4674 2.4252 -8.6613 18 6 8.0616 2.3717 -9.9632 19 6 6.8609 1.7631 -10.3055 20 6 6.4332 1.7166 -11.7497 21 8 6.2899 0.3554 -12.1605 22 14 7.7207 2.5516 -12.8060 23 6 6.0571 1.2028 -9.3379 24 6 6.4487 1.2456 -8.0030 25 7 5.8776 0.7863 -6.8397 26 6 3.9835 0.6871 -1.9735 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 1.5954 -1.7201 1.1995 31 1 3.0487 -0.6921 1.1996 32 1 1.5954 -0.1786 2.0894 33 1 1.5241 -0.2330 -2.0871 34 1 1.6703 -1.7426 -1.1558 35 1 3.4312 -1.5396 -3.2590 36 1 4.6081 -2.2971 -2.1016 37 1 4.6850 -0.1353 -4.7047 38 1 8.6261 2.1263 -5.6620 39 1 9.4027 2.9003 -8.4048 40 1 8.6800 2.8066 -10.7345 41 1 5.4798 2.2326 -11.8631 42 1 7.1014 -0.1653 -12.0864 43 1 9.0326 1.8770 -12.6359 44 1 7.3109 2.5119 -14.2328 45 1 5.1250 0.7322 -9.6141 46 1 5.0329 0.3143 -6.7733 47 1 4.3810 1.4403 -1.2931 48 1 3.2711 1.0962 -2.6898 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_13158378.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:25:18 Heat of formation + Delta-G solvation = 153.232106 kcal Electronic energy + Delta-G solvation = -27504.257038 eV Core-core repulsion = 23646.674170 eV Total energy + Delta-G solvation = -3857.582868 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.181 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -44.56055 -43.49419 -42.16494 -40.61286 -39.63623 -37.63718 -36.11521 -34.02136 -32.59011 -31.98274 -31.66613 -31.14749 -28.82444 -28.38725 -27.65817 -26.04810 -24.76011 -23.87974 -22.88331 -22.73754 -22.08770 -21.74259 -20.53696 -20.18229 -19.74384 -19.20023 -18.73349 -18.23475 -18.19168 -17.53079 -17.50120 -16.91431 -16.79430 -16.59544 -16.35505 -16.27127 -16.11385 -15.95189 -15.79186 -15.74751 -15.68380 -15.45791 -15.38057 -15.25505 -15.21065 -14.81171 -14.61330 -14.16209 -13.77070 -13.65653 -13.35156 -13.26922 -13.20803 -12.64670 -12.30535 -12.16211 -11.69051 -11.50869 -11.21129 -10.06794 -9.57052 -5.45989 -1.53735 -1.13514 -0.18009 0.16066 0.38483 0.46221 0.64221 0.71261 0.76040 0.99586 1.10687 1.19621 1.27722 1.33812 1.48325 1.54637 1.62007 1.65023 1.73269 1.82943 2.01486 2.04274 2.07630 2.10523 2.16332 2.24390 2.30690 2.58684 2.74024 2.81510 2.85230 2.90458 2.93847 3.03656 3.11252 3.23035 3.29696 3.46635 3.52727 3.58712 3.72266 3.80802 3.95757 4.00968 4.16234 4.26732 4.55024 4.69575 4.83463 4.86017 5.09434 5.28522 5.47443 5.80857 5.92497 Molecular weight = 331.18amu Principal moments of inertia in cm(-1) A = 0.023100 B = 0.002070 C = 0.001959 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1211.822920 B =13520.677948 C =14292.284323 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.387 5.387 3 H 0.428 0.572 4 C -0.053 4.053 5 C 0.002 3.998 6 C -0.146 4.146 7 H 0.120 0.880 8 C -0.132 4.132 9 C 0.131 3.869 10 H 0.126 0.874 11 N -0.725 5.725 12 C 0.591 3.409 13 O -0.512 6.512 14 C -0.002 4.002 15 C -0.088 4.088 16 C -0.120 4.120 17 C -0.048 4.048 18 C -0.143 4.143 19 C -0.078 4.078 20 C -0.076 4.076 21 O -0.530 6.530 22 Si 0.688 3.312 23 C -0.108 4.108 24 C 0.119 3.881 25 N -0.581 5.581 26 C -0.161 4.161 27 H 0.122 0.878 28 H 0.125 0.875 29 H 0.123 0.877 30 H 0.123 0.877 31 H 0.124 0.876 32 H 0.125 0.875 33 H 0.131 0.869 34 H 0.132 0.868 35 H 0.098 0.902 36 H 0.094 0.906 37 H 0.399 0.601 38 H 0.159 0.841 39 H 0.134 0.866 40 H 0.133 0.867 41 H 0.120 0.880 42 H 0.378 0.622 43 H -0.258 1.258 44 H -0.256 1.256 45 H 0.127 0.873 46 H 0.414 0.586 47 H 0.088 0.912 48 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -21.143 -4.438 27.109 34.664 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 N 0.037 4.963 3 H 0.263 0.737 4 C -0.195 4.195 5 C -0.119 4.119 6 C -0.165 4.165 7 H 0.138 0.862 8 C -0.171 4.171 9 C 0.026 3.974 10 H 0.144 0.856 11 N -0.377 5.377 12 C 0.379 3.621 13 O -0.386 6.386 14 C -0.110 4.110 15 C -0.115 4.115 16 C -0.124 4.124 17 C -0.067 4.067 18 C -0.162 4.162 19 C -0.080 4.080 20 C -0.185 4.185 21 O -0.337 6.337 22 Si 0.588 3.412 23 C -0.129 4.129 24 C 0.010 3.990 25 N -0.187 5.187 26 C -0.199 4.199 27 H 0.141 0.859 28 H 0.144 0.856 29 H 0.141 0.859 30 H 0.142 0.858 31 H 0.143 0.857 32 H 0.144 0.856 33 H 0.149 0.851 34 H 0.151 0.849 35 H 0.116 0.884 36 H 0.113 0.887 37 H 0.233 0.767 38 H 0.177 0.823 39 H 0.152 0.848 40 H 0.150 0.850 41 H 0.138 0.862 42 H 0.225 0.775 43 H -0.183 1.183 44 H -0.181 1.181 45 H 0.145 0.855 46 H 0.252 0.748 47 H 0.107 0.893 48 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -20.801 -4.437 27.067 34.423 hybrid contribution -0.612 -1.326 -0.117 1.465 sum -21.412 -5.763 26.950 34.900 Atomic orbital electron populations 1.24149 0.75493 1.09667 1.09649 1.45027 1.16289 1.19081 1.15866 0.73741 1.24208 1.06032 1.02493 0.86725 1.24064 0.97979 1.02525 0.87353 1.23047 0.90792 1.00794 1.01863 0.86242 1.23368 0.98179 0.98687 0.96872 1.22348 0.98309 0.93958 0.82821 0.85584 1.45781 1.23151 1.60074 1.08676 1.17242 0.81089 0.77335 0.86429 1.90908 1.45712 1.52221 1.49728 1.19878 0.95180 1.09011 0.86933 1.21040 0.97697 0.99723 0.93016 1.18228 0.95910 1.04669 0.93624 1.20430 0.98635 0.96498 0.91115 1.20564 0.96695 1.02276 0.96638 1.20061 0.94460 0.97933 0.95573 1.25062 1.10836 0.88090 0.94549 1.86603 1.38672 1.20763 1.87636 0.94850 0.76524 0.90342 0.79436 1.19858 1.01257 1.03580 0.88210 1.18297 0.94166 0.99121 0.87449 1.41788 1.20884 1.51382 1.04596 1.23844 0.99608 0.96261 1.00220 0.85913 0.85614 0.85875 0.85834 0.85733 0.85617 0.85121 0.84941 0.88399 0.88730 0.76700 0.82296 0.84776 0.85004 0.86195 0.77464 1.18287 1.18098 0.85477 0.74800 0.89327 0.88572 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.54 9.19 60.06 0.55 2.09 16 2 N -0.39 12.80 0.66 -251.26 -0.17 12.63 16 3 H 0.43 -14.63 8.44 -39.29 -0.33 -14.96 16 4 C -0.05 1.68 8.97 60.06 0.54 2.22 16 5 C 0.00 -0.07 4.48 -3.82 -0.02 -0.09 16 6 C -0.15 3.93 3.58 -89.71 -0.32 3.61 16 7 H 0.12 -3.32 6.10 -51.93 -0.32 -3.63 16 8 C -0.13 3.03 7.39 -25.92 -0.19 2.84 16 9 C 0.13 -2.48 4.21 -67.12 -0.28 -2.76 16 10 H 0.13 -2.06 7.50 -51.93 -0.39 -2.45 16 11 N -0.73 11.70 5.36 -54.21 -0.29 11.41 16 12 C 0.59 -6.37 7.80 -12.68 -0.10 -6.47 16 13 O -0.51 3.51 16.46 5.23 0.09 3.59 16 14 C 0.00 0.02 6.96 -82.29 -0.57 -0.56 16 15 C -0.09 0.68 10.53 -39.16 -0.41 0.26 16 16 C -0.12 0.87 6.16 -106.93 -0.66 0.21 16 17 C -0.05 0.37 10.06 -39.53 -0.40 -0.03 16 18 C -0.14 1.13 8.59 -39.98 -0.34 0.79 16 19 C -0.08 0.61 5.40 -104.57 -0.56 0.04 16 20 C -0.08 0.58 2.81 36.00 0.10 0.68 16 21 O -0.53 3.24 12.76 -35.23 -0.45 2.79 16 22 Si 0.69 -5.17 29.75 -169.99 -5.06 -10.22 16 23 C -0.11 0.88 9.61 -39.43 -0.38 0.50 16 24 C 0.12 -0.99 7.25 -83.97 -0.61 -1.60 16 25 N -0.58 6.53 6.07 -7.36 -0.04 6.49 16 26 C -0.16 3.72 7.45 -25.83 -0.19 3.53 16 27 H 0.12 -3.89 8.14 -51.93 -0.42 -4.31 16 28 H 0.13 -4.01 8.14 -51.93 -0.42 -4.43 16 29 H 0.12 -3.93 8.11 -51.93 -0.42 -4.35 16 30 H 0.12 -3.88 8.11 -51.93 -0.42 -4.31 16 31 H 0.12 -3.89 6.10 -51.93 -0.32 -4.21 16 32 H 0.13 -3.98 8.14 -51.93 -0.42 -4.40 16 33 H 0.13 -4.08 7.80 -51.93 -0.40 -4.48 16 34 H 0.13 -4.12 8.09 -51.93 -0.42 -4.54 16 35 H 0.10 -2.31 8.07 -51.93 -0.42 -2.73 16 36 H 0.09 -2.03 8.14 -51.93 -0.42 -2.46 16 37 H 0.40 -7.43 7.77 -40.82 -0.32 -7.75 16 38 H 0.16 -1.29 8.06 -52.49 -0.42 -1.72 16 39 H 0.13 -1.26 8.06 -52.49 -0.42 -1.68 16 40 H 0.13 -1.22 4.82 -52.48 -0.25 -1.47 16 41 H 0.12 -1.02 7.96 -51.93 -0.41 -1.44 16 42 H 0.38 -3.27 8.70 45.56 0.40 -2.87 16 43 H -0.26 1.39 7.11 56.52 0.40 1.79 16 44 H -0.26 0.95 7.11 56.52 0.40 1.35 16 45 H 0.13 -1.17 8.06 -52.48 -0.42 -1.59 16 46 H 0.41 -6.18 8.12 -40.82 -0.33 -6.51 16 47 H 0.09 -1.95 8.14 -51.93 -0.42 -2.37 16 48 H 0.10 -2.28 7.90 -51.93 -0.41 -2.69 16 LS Contribution 384.18 15.07 5.79 5.79 Total: 1.00 -39.13 384.18 -11.33 -50.46 By element: Atomic # 1 Polarization: -80.86 SS G_CDS: -7.35 Total: -88.21 kcal Atomic # 6 Polarization: 9.12 SS G_CDS: -3.85 Total: 5.27 kcal Atomic # 7 Polarization: 31.03 SS G_CDS: -0.50 Total: 30.53 kcal Atomic # 8 Polarization: 6.75 SS G_CDS: -0.36 Total: 6.39 kcal Atomic # 14 Polarization: -5.17 SS G_CDS: -5.06 Total: -10.22 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -39.13 -11.33 -50.46 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13158378.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 203.691 kcal (2) G-P(sol) polarization free energy of solvation -39.128 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 164.562 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.330 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -50.458 kcal (6) G-S(sol) free energy of system = (1) + (5) 153.232 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds