Wall clock time and date at job start Sun Mar 7 2021 06:25:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 H 1.00904 * 109.47122 * 2 1 4 4 C 1.46897 * 109.47472 * 119.99952 * 2 1 3 5 5 C 1.46898 * 109.47102 * 240.00181 * 2 1 3 6 6 C 1.53011 * 109.46965 * 174.99710 * 5 2 1 7 7 H 1.08997 * 112.84822 * 43.80208 * 6 5 2 8 8 C 1.53777 * 113.61229 * 174.99821 * 6 5 2 9 9 C 1.53782 * 87.08162 * 139.98273 * 8 6 5 10 10 H 1.08992 * 113.61510 * 89.19741 * 9 8 6 11 11 N 1.46495 * 113.61155 * 220.01949 * 9 8 6 12 12 C 1.34782 * 119.99946 * 203.46697 * 11 9 8 13 13 O 1.21654 * 119.99478 * 0.02562 * 12 11 9 14 14 C 1.47056 * 120.00473 * 180.02562 * 12 11 9 15 15 C 1.35859 * 125.42815 * 179.97438 * 14 12 11 16 16 C 1.41593 * 107.72847 * 180.02562 * 15 14 12 17 17 C 1.40068 * 133.38445 * 180.02562 * 16 15 14 18 18 C 1.36468 * 119.83035 * 179.97438 * 17 16 15 19 19 C 1.38897 * 120.61856 * 359.97011 * 18 17 16 20 20 C 1.50696 * 119.67454 * 179.97438 * 19 18 17 21 21 O 1.42905 * 109.47144 * 120.02309 * 20 19 18 22 22 Si 1.86296 * 109.47499 * 0.02562 * 20 19 18 23 23 C 1.37710 * 120.64488 * 0.02562 * 19 18 17 24 24 C 1.39178 * 119.81120 * 0.02562 * 23 19 18 25 25 N 1.37495 * 133.18453 * 180.02562 * 24 23 19 26 26 C 1.53782 * 87.17079 * 334.60677 * 9 8 6 27 27 H 1.09000 * 109.47025 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.46985 * 300.00127 * 1 2 3 29 29 H 1.08998 * 109.47182 * 59.99651 * 1 2 3 30 30 H 1.09000 * 109.47231 * 59.99838 * 4 2 1 31 31 H 1.09004 * 109.47469 * 180.02562 * 4 2 1 32 32 H 1.09003 * 109.46951 * 299.99941 * 4 2 1 33 33 H 1.08992 * 109.47340 * 55.00080 * 5 2 1 34 34 H 1.08992 * 109.47221 * 294.99632 * 5 2 1 35 35 H 1.09001 * 113.61331 * 25.43390 * 8 6 5 36 36 H 1.08998 * 113.69245 * 254.54614 * 8 6 5 37 37 H 0.97000 * 120.00396 * 23.47615 * 11 9 8 38 38 H 1.07993 * 126.13624 * 0.04311 * 15 14 12 39 39 H 1.07997 * 120.07962 * 359.95788 * 17 16 15 40 40 H 1.08004 * 119.69024 * 179.97438 * 18 17 16 41 41 H 1.09001 * 109.47035 * 240.01821 * 20 19 18 42 42 H 0.96703 * 113.99840 * 299.99566 * 21 20 19 43 43 H 1.48498 * 109.99894 * 58.68201 * 22 20 19 44 44 H 1.48502 * 109.99962 * 179.97438 * 22 20 19 45 45 H 1.08005 * 120.09016 * 179.97438 * 23 19 18 46 46 H 0.96994 * 125.60764 * 0.24342 * 25 24 23 47 47 H 1.09002 * 113.61377 * 139.93857 * 26 9 8 48 48 H 1.08997 * 113.61920 * 270.83912 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9586 -0.6924 -1.1994 6 6 3.4835 -0.5844 -1.2639 7 1 3.9616 -0.7637 -0.3009 8 6 4.1092 -1.3819 -2.4203 9 6 5.0667 -0.1947 -2.6169 10 1 5.9792 -0.2671 -2.0251 11 7 5.3244 0.1246 -4.0232 12 6 6.4500 0.7798 -4.3701 13 8 7.2521 1.1055 -3.5154 14 6 6.7086 1.1009 -5.7817 15 6 7.8020 1.7551 -6.2531 16 6 7.6675 1.8626 -7.6585 17 6 8.4674 2.4252 -8.6613 18 6 8.0616 2.3717 -9.9632 19 6 6.8609 1.7631 -10.3055 20 6 6.4332 1.7166 -11.7497 21 8 6.2899 0.3554 -12.1605 22 14 7.7207 2.5516 -12.8060 23 6 6.0571 1.2028 -9.3379 24 6 6.4487 1.2456 -8.0030 25 7 5.8776 0.7863 -6.8397 26 6 3.9835 0.6871 -1.9735 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 1.5954 -1.7201 1.1995 31 1 3.0487 -0.6921 1.1996 32 1 1.5954 -0.1786 2.0894 33 1 1.5241 -0.2330 -2.0871 34 1 1.6703 -1.7426 -1.1558 35 1 3.4312 -1.5396 -3.2590 36 1 4.6081 -2.2971 -2.1016 37 1 4.6850 -0.1353 -4.7047 38 1 8.6261 2.1263 -5.6620 39 1 9.4027 2.9003 -8.4048 40 1 8.6800 2.8066 -10.7345 41 1 5.4798 2.2326 -11.8631 42 1 7.1014 -0.1653 -12.0864 43 1 9.0326 1.8770 -12.6359 44 1 7.3109 2.5119 -14.2328 45 1 5.1250 0.7322 -9.6141 46 1 5.0329 0.3143 -6.7733 47 1 4.3810 1.4403 -1.2931 48 1 3.2711 1.0962 -2.6898 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_13158378.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:25:17 Heat of formation + Delta-G solvation = 125.698152 kcal Electronic energy + Delta-G solvation = -27505.450999 eV Core-core repulsion = 23646.674170 eV Total energy + Delta-G solvation = -3858.776830 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.181 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.77067 -42.16259 -40.83475 -39.33763 -38.85068 -37.02396 -34.91780 -33.32253 -31.31668 -30.45764 -30.06730 -29.40153 -27.19929 -26.89522 -25.81658 -24.74043 -23.59753 -22.86665 -22.03023 -21.48317 -20.84843 -19.50645 -19.32081 -18.53762 -18.05257 -17.79451 -17.38139 -16.91331 -16.75011 -16.57360 -16.22545 -16.15821 -15.72366 -15.58680 -15.25649 -14.93272 -14.74621 -14.58399 -14.54158 -14.08674 -13.87077 -13.59697 -13.53027 -13.44679 -13.28945 -13.23685 -13.17959 -12.99314 -12.60825 -12.54602 -12.29876 -12.16413 -11.81334 -11.61523 -11.56696 -11.39553 -11.02025 -10.64960 -10.29295 -9.37864 -8.86679 -4.91184 -0.42822 0.47900 0.88341 1.01238 1.30743 1.60719 1.69155 1.92898 1.99456 2.10844 2.72084 2.90094 2.94634 3.13918 3.36447 3.37863 3.40409 3.54426 3.63118 3.68722 3.69820 3.75304 3.84350 4.00345 4.14170 4.20637 4.23694 4.25946 4.32863 4.35576 4.41747 4.48932 4.49939 4.61291 4.65067 4.66567 4.68844 4.77325 4.84349 4.84693 4.87030 4.92313 4.95468 5.01827 5.07274 5.25082 5.35805 5.43179 5.50430 5.52378 5.93320 6.19566 6.40292 6.46229 6.90020 Molecular weight = 331.18amu Principal moments of inertia in cm(-1) A = 0.023100 B = 0.002070 C = 0.001959 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1211.822920 B =13520.677948 C =14292.284323 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.373 5.373 3 H 0.436 0.564 4 C -0.055 4.055 5 C 0.011 3.989 6 C -0.118 4.118 7 H 0.128 0.872 8 C -0.127 4.127 9 C 0.095 3.905 10 H 0.090 0.910 11 N -0.702 5.702 12 C 0.588 3.412 13 O -0.561 6.561 14 C 0.011 3.989 15 C -0.125 4.125 16 C -0.136 4.136 17 C -0.063 4.063 18 C -0.148 4.148 19 C -0.087 4.087 20 C -0.072 4.072 21 O -0.547 6.547 22 Si 0.757 3.243 23 C -0.106 4.106 24 C 0.109 3.891 25 N -0.559 5.559 26 C -0.152 4.152 27 H 0.121 0.879 28 H 0.124 0.876 29 H 0.125 0.875 30 H 0.123 0.877 31 H 0.119 0.881 32 H 0.126 0.874 33 H 0.145 0.855 34 H 0.144 0.856 35 H 0.114 0.886 36 H 0.080 0.920 37 H 0.413 0.587 38 H 0.151 0.849 39 H 0.142 0.858 40 H 0.141 0.859 41 H 0.132 0.868 42 H 0.386 0.614 43 H -0.287 1.287 44 H -0.309 1.309 45 H 0.140 0.860 46 H 0.433 0.567 47 H 0.076 0.924 48 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -24.239 -5.177 28.351 37.657 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.051 4.949 3 H 0.272 0.728 4 C -0.197 4.197 5 C -0.111 4.111 6 C -0.137 4.137 7 H 0.146 0.854 8 C -0.165 4.165 9 C -0.009 4.009 10 H 0.109 0.891 11 N -0.353 5.353 12 C 0.375 3.625 13 O -0.439 6.439 14 C -0.099 4.099 15 C -0.152 4.152 16 C -0.140 4.140 17 C -0.082 4.082 18 C -0.167 4.167 19 C -0.089 4.089 20 C -0.182 4.182 21 O -0.355 6.355 22 Si 0.664 3.336 23 C -0.126 4.126 24 C -0.002 4.002 25 N -0.166 5.166 26 C -0.191 4.191 27 H 0.140 0.860 28 H 0.142 0.858 29 H 0.144 0.856 30 H 0.142 0.858 31 H 0.138 0.862 32 H 0.144 0.856 33 H 0.163 0.837 34 H 0.162 0.838 35 H 0.133 0.867 36 H 0.099 0.901 37 H 0.250 0.750 38 H 0.168 0.832 39 H 0.160 0.840 40 H 0.158 0.842 41 H 0.150 0.850 42 H 0.236 0.764 43 H -0.214 1.214 44 H -0.237 1.237 45 H 0.158 0.842 46 H 0.275 0.725 47 H 0.095 0.905 48 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -23.969 -5.201 28.333 37.474 hybrid contribution 0.364 -1.158 -0.463 1.299 sum -23.605 -6.359 27.870 37.073 Atomic orbital electron populations 1.24135 0.75362 1.09607 1.09700 1.44813 1.16066 1.19326 1.14696 0.72758 1.24205 1.05703 1.02691 0.87123 1.23896 0.94679 1.03830 0.88671 1.22805 0.93801 0.96536 1.00591 0.85449 1.23344 0.97371 0.96728 0.99106 1.22811 0.98799 0.98526 0.80801 0.89136 1.45736 1.21328 1.57606 1.10613 1.17223 0.82085 0.77796 0.85431 1.90881 1.47719 1.54668 1.50619 1.20051 0.94601 1.07382 0.87824 1.21110 0.98883 1.01969 0.93237 1.18448 0.96672 1.05059 0.93831 1.20616 0.99220 0.97005 0.91311 1.20686 0.96900 1.02344 0.96753 1.20048 0.94740 0.98640 0.95510 1.25072 1.11178 0.87476 0.94467 1.86570 1.39652 1.21489 1.87786 0.94056 0.74392 0.89306 0.75831 1.19976 1.01524 1.03111 0.88010 1.18355 0.94176 0.99537 0.88090 1.41672 1.21162 1.50461 1.03313 1.23782 0.98080 0.96991 1.00206 0.86047 0.85772 0.85622 0.85802 0.86219 0.85594 0.83700 0.83755 0.86739 0.90098 0.74972 0.83160 0.83992 0.84178 0.85050 0.76435 1.21417 1.23739 0.84229 0.72530 0.90492 0.87132 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.00 9.19 127.69 1.17 4.17 16 2 N -0.37 24.83 0.66 -948.86 -0.62 24.21 16 3 H 0.44 -30.04 8.44 -89.69 -0.76 -30.80 16 4 C -0.06 3.49 8.97 127.69 1.15 4.64 16 5 C 0.01 -0.71 4.48 86.31 0.39 -0.32 16 6 C -0.12 6.39 3.58 -10.21 -0.04 6.35 16 7 H 0.13 -7.04 6.10 -2.39 -0.01 -7.05 16 8 C -0.13 5.75 7.39 31.12 0.23 5.98 16 9 C 0.09 -3.40 4.21 45.52 0.19 -3.21 16 10 H 0.09 -2.57 7.50 -2.39 -0.02 -2.59 16 11 N -0.70 21.54 5.36 -443.65 -2.38 19.17 16 12 C 0.59 -11.06 7.80 86.55 0.68 -10.38 16 13 O -0.56 5.40 16.46 -4.20 -0.07 5.33 16 14 C 0.01 -0.19 6.96 39.91 0.28 0.08 16 15 C -0.12 1.51 10.53 22.55 0.24 1.75 16 16 C -0.14 1.63 6.16 -21.36 -0.13 1.50 16 17 C -0.06 0.82 10.06 22.30 0.22 1.04 16 18 C -0.15 2.10 8.59 22.01 0.19 2.29 16 19 C -0.09 1.26 5.40 -19.83 -0.11 1.16 16 20 C -0.07 1.05 2.81 71.23 0.20 1.25 16 21 O -0.55 6.26 12.76 -148.98 -1.90 4.36 16 22 Si 0.76 -10.06 29.75 68.60 2.04 -8.02 16 23 C -0.11 1.66 9.61 22.37 0.22 1.87 16 24 C 0.11 -1.68 7.25 39.13 0.28 -1.39 16 25 N -0.56 12.09 6.07 -177.19 -1.08 11.01 16 26 C -0.15 6.94 7.45 31.18 0.23 7.18 16 27 H 0.12 -7.75 8.14 -2.39 -0.02 -7.77 16 28 H 0.12 -7.91 8.14 -2.39 -0.02 -7.93 16 29 H 0.13 -8.12 8.11 -2.39 -0.02 -8.14 16 30 H 0.12 -7.79 8.11 -2.39 -0.02 -7.81 16 31 H 0.12 -7.43 6.10 -2.38 -0.01 -7.44 16 32 H 0.13 -7.92 8.14 -2.39 -0.02 -7.94 16 33 H 0.15 -9.37 7.80 -2.39 -0.02 -9.39 16 34 H 0.14 -9.24 8.09 -2.39 -0.02 -9.26 16 35 H 0.11 -5.54 8.07 -2.39 -0.02 -5.56 16 36 H 0.08 -3.37 8.14 -2.39 -0.02 -3.39 16 37 H 0.41 -15.33 7.77 -92.71 -0.72 -16.05 16 38 H 0.15 -1.74 8.06 -2.91 -0.02 -1.76 16 39 H 0.14 -2.27 8.06 -2.91 -0.02 -2.29 16 40 H 0.14 -2.37 4.82 -2.91 -0.01 -2.38 16 41 H 0.13 -2.22 7.96 -2.39 -0.02 -2.24 16 42 H 0.39 -6.26 8.70 -74.06 -0.64 -6.91 16 43 H -0.29 2.48 7.11 99.48 0.71 3.19 16 44 H -0.31 1.37 7.11 99.48 0.71 2.08 16 45 H 0.14 -2.60 8.06 -2.91 -0.02 -2.63 16 46 H 0.43 -13.04 8.12 -92.71 -0.75 -13.79 16 47 H 0.08 -3.26 8.14 -2.39 -0.02 -3.28 16 48 H 0.11 -5.32 7.90 -2.39 -0.02 -5.34 16 Total: 1.00 -85.99 384.18 -0.44 -86.43 By element: Atomic # 1 Polarization: -164.64 SS G_CDS: -1.82 Total: -166.46 kcal Atomic # 6 Polarization: 18.57 SS G_CDS: 5.39 Total: 23.96 kcal Atomic # 7 Polarization: 58.47 SS G_CDS: -4.08 Total: 54.39 kcal Atomic # 8 Polarization: 11.66 SS G_CDS: -1.97 Total: 9.69 kcal Atomic # 14 Polarization: -10.06 SS G_CDS: 2.04 Total: -8.02 kcal Total: -85.99 -0.44 -86.43 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13158378.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 212.130 kcal (2) G-P(sol) polarization free energy of solvation -85.991 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 126.138 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.440 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -86.432 kcal (6) G-S(sol) free energy of system = (1) + (5) 125.698 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds