Wall clock time and date at job start Sun Mar 7 2021 06:25:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46897 * 1 3 3 H 1.00896 * 109.47200 * 2 1 4 4 C 1.46906 * 109.46780 * 120.00310 * 2 1 3 5 5 C 1.46903 * 109.47216 * 240.00086 * 2 1 3 6 6 C 1.52995 * 109.47203 * 175.00215 * 5 2 1 7 7 H 1.09002 * 112.85043 * 314.66654 * 6 5 2 8 8 C 1.53785 * 113.69093 * 85.93770 * 6 5 2 9 9 C 1.53779 * 87.08093 * 139.99088 * 8 6 5 10 10 H 1.09003 * 113.61186 * 89.11185 * 9 8 6 11 11 N 1.46495 * 113.69143 * 220.00570 * 9 8 6 12 12 C 1.34781 * 120.00320 * 252.53744 * 11 9 8 13 13 O 1.21589 * 119.99334 * 359.97438 * 12 11 9 14 14 C 1.47558 * 120.00068 * 179.97438 * 12 11 9 15 15 C 1.40211 * 120.11890 * 179.72268 * 14 12 11 16 16 O 1.35643 * 120.00516 * 359.97438 * 15 14 12 17 17 C 1.38823 * 119.99268 * 179.70204 * 15 14 12 18 18 C 1.37773 * 120.24599 * 0.59975 * 17 15 14 19 19 C 1.39840 * 120.24188 * 359.67851 * 18 17 15 20 20 C 1.47820 * 119.99782 * 179.97438 * 19 18 17 21 21 C 1.35931 * 125.93282 * 359.74029 * 20 19 18 22 22 C 1.40964 * 106.74205 * 179.88940 * 21 20 19 23 23 C 1.34705 * 107.03196 * 0.36993 * 22 21 20 24 24 C 1.50695 * 125.66610 * 179.74759 * 23 22 21 25 25 O 1.42907 * 109.46925 * 65.00388 * 24 23 22 26 26 Si 1.86296 * 109.47183 * 185.00160 * 24 23 22 27 27 O 1.34346 * 108.66861 * 359.77008 * 23 22 21 28 28 C 1.39180 * 120.00148 * 0.02562 * 19 18 17 29 29 C 1.53781 * 113.61293 * 183.47395 * 6 5 2 30 30 H 1.08999 * 109.47424 * 179.97438 * 1 2 3 31 31 H 1.09002 * 109.47094 * 299.99795 * 1 2 3 32 32 H 1.09002 * 109.47312 * 59.99561 * 1 2 3 33 33 H 1.08999 * 109.47016 * 59.99905 * 4 2 1 34 34 H 1.09002 * 109.46728 * 179.97438 * 4 2 1 35 35 H 1.08993 * 109.47123 * 299.99563 * 4 2 1 36 36 H 1.09005 * 109.46752 * 54.99928 * 5 2 1 37 37 H 1.09004 * 109.47025 * 295.00661 * 5 2 1 38 38 H 1.09003 * 113.60734 * 254.54208 * 8 6 5 39 39 H 1.08996 * 113.61146 * 25.43706 * 8 6 5 40 40 H 0.97002 * 120.00038 * 72.53585 * 11 9 8 41 41 H 0.96708 * 114.00038 * 89.99675 * 16 15 14 42 42 H 1.08002 * 119.87903 * 180.32667 * 17 15 14 43 43 H 1.07998 * 119.87731 * 179.69833 * 18 17 15 44 44 H 1.08005 * 126.62145 * 359.97438 * 21 20 19 45 45 H 1.08004 * 126.48421 * 180.10723 * 22 21 20 46 46 H 1.08999 * 109.47203 * 305.00205 * 24 23 22 47 47 H 0.96697 * 113.99655 * 59.99902 * 25 24 23 48 48 H 1.48502 * 110.00220 * 180.02562 * 26 24 23 49 49 H 1.48502 * 110.00316 * 301.32046 * 26 24 23 50 50 H 1.07999 * 120.12070 * 180.02562 * 28 19 18 51 51 H 1.09005 * 113.61302 * 334.47929 * 29 6 5 52 52 H 1.08993 * 113.62030 * 105.38774 * 29 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6926 1.1995 5 6 1.9587 -0.6925 -1.1995 6 6 3.4835 -0.5846 -1.2639 7 1 3.8458 0.4219 -1.0545 8 6 4.2145 -1.6801 -0.4700 9 6 5.2191 -1.7423 -1.6326 10 1 6.0559 -1.0523 -1.5240 11 7 5.6439 -3.1028 -1.9714 12 6 6.8869 -3.5186 -1.6575 13 8 7.6559 -2.7643 -1.0936 14 6 7.3145 -4.8892 -1.9982 15 6 8.6090 -5.3224 -1.6781 16 8 9.4710 -4.4810 -1.0545 17 6 9.0065 -6.6144 -1.9943 18 6 8.1372 -7.4710 -2.6337 19 6 6.8458 -7.0475 -2.9629 20 6 5.9178 -7.9709 -3.6494 21 6 6.1934 -9.2493 -4.0202 22 6 5.0299 -9.7533 -4.6361 23 6 4.1145 -8.7653 -4.6182 24 6 2.7171 -8.8521 -5.1758 25 8 1.9661 -9.8134 -4.4314 26 14 1.8930 -7.1862 -5.0480 27 8 4.6543 -7.6896 -4.0213 28 6 6.4346 -5.7564 -2.6452 29 6 4.0920 -1.2070 -2.5316 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3634 0.5139 -0.8900 33 1 1.5952 -1.7202 1.1994 34 1 3.0486 -0.6930 1.1992 35 1 1.5953 -0.1788 2.0894 36 1 1.5240 -0.2329 -2.0872 37 1 1.6702 -1.7428 -1.1559 38 1 4.6495 -1.3255 0.4645 39 1 3.6316 -2.5929 -0.3471 40 1 5.0305 -3.7045 -2.4216 41 1 9.4316 -4.5220 -0.0891 42 1 10.0023 -6.9479 -1.7421 43 1 8.4543 -8.4732 -2.8812 44 1 7.1237 -9.7772 -3.8705 45 1 4.8988 -10.7429 -5.0484 46 1 2.7614 -9.1562 -6.2215 47 1 1.8856 -9.6063 -3.4903 48 1 0.5139 -7.2585 -5.5940 49 1 1.8550 -6.7457 -3.6303 50 1 5.4375 -5.4275 -2.8982 51 1 3.4757 -1.9906 -2.9724 52 1 4.4282 -0.4707 -3.2615 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_13259648.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:25:27 Heat of formation + Delta-G solvation = 73.135993 kcal Electronic energy + Delta-G solvation = -34226.372582 eV Core-core repulsion = 29665.151872 eV Total energy + Delta-G solvation = -4561.220710 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.185 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -43.73322 -42.27141 -41.53121 -40.10660 -38.80809 -38.22121 -37.86128 -34.87905 -34.19336 -32.80778 -32.39182 -30.16004 -29.95914 -29.51053 -26.70315 -26.41718 -26.16610 -25.25518 -23.93576 -23.39613 -22.74637 -21.75300 -21.40176 -20.93218 -19.62089 -19.20785 -19.08082 -18.36484 -18.08459 -17.68151 -17.50849 -17.37700 -16.98260 -16.69895 -16.43215 -16.27635 -15.99730 -15.88784 -15.79543 -15.44200 -14.72750 -14.55441 -14.45751 -14.35188 -14.01938 -13.92301 -13.81488 -13.63859 -13.56662 -13.49636 -13.42322 -13.29573 -13.23375 -13.15683 -13.08582 -12.90410 -12.82955 -12.30809 -12.07987 -11.92584 -11.75900 -11.48992 -11.11457 -10.92335 -10.78821 -10.51665 -10.35032 -10.02643 -8.94753 -4.93022 -0.60473 -0.24265 0.72784 1.03233 1.15486 1.43936 1.45898 1.67014 1.82837 1.94411 2.04279 2.59146 2.89154 2.96637 3.06719 3.18841 3.21692 3.29478 3.34598 3.46968 3.50470 3.61190 3.72857 3.79274 3.87730 3.97177 3.97671 4.04165 4.15063 4.17034 4.20553 4.31094 4.33735 4.39899 4.42875 4.48520 4.58989 4.63892 4.68103 4.71490 4.74639 4.76330 4.78319 4.84595 4.85198 4.87669 4.94499 4.97870 5.07756 5.10770 5.16964 5.19713 5.38138 5.45446 5.52624 5.92764 6.36256 6.40084 6.68026 7.11816 Molecular weight = 374.18amu Principal moments of inertia in cm(-1) A = 0.006280 B = 0.003171 C = 0.002208 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4457.633425 B = 8826.543790 C =12677.843033 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.369 5.369 3 H 0.439 0.561 4 C -0.058 4.058 5 C 0.011 3.989 6 C -0.117 4.117 7 H 0.127 0.873 8 C -0.153 4.153 9 C 0.095 3.905 10 H 0.087 0.913 11 N -0.705 5.705 12 C 0.560 3.440 13 O -0.560 6.560 14 C -0.180 4.180 15 C 0.161 3.839 16 O -0.496 6.496 17 C -0.153 4.153 18 C -0.050 4.050 19 C -0.041 4.041 20 C 0.028 3.972 21 C -0.196 4.196 22 C -0.190 4.190 23 C -0.047 4.047 24 C -0.058 4.058 25 O -0.540 6.540 26 Si 0.792 3.208 27 O -0.163 6.163 28 C -0.043 4.043 29 C -0.129 4.129 30 H 0.118 0.882 31 H 0.123 0.877 32 H 0.128 0.872 33 H 0.121 0.879 34 H 0.116 0.884 35 H 0.126 0.874 36 H 0.151 0.849 37 H 0.138 0.862 38 H 0.079 0.921 39 H 0.110 0.890 40 H 0.413 0.587 41 H 0.410 0.590 42 H 0.155 0.845 43 H 0.156 0.844 44 H 0.166 0.834 45 H 0.153 0.847 46 H 0.141 0.859 47 H 0.390 0.610 48 H -0.291 1.291 49 H -0.263 1.263 50 H 0.161 0.839 51 H 0.115 0.885 52 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.641 21.551 10.233 30.902 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.054 4.946 3 H 0.276 0.724 4 C -0.201 4.201 5 C -0.111 4.111 6 C -0.136 4.136 7 H 0.145 0.855 8 C -0.191 4.191 9 C -0.009 4.009 10 H 0.105 0.895 11 N -0.358 5.358 12 C 0.347 3.653 13 O -0.439 6.439 14 C -0.184 4.184 15 C 0.115 3.885 16 O -0.309 6.309 17 C -0.171 4.171 18 C -0.068 4.068 19 C -0.041 4.041 20 C -0.021 4.021 21 C -0.215 4.215 22 C -0.209 4.209 23 C -0.097 4.097 24 C -0.165 4.165 25 O -0.348 6.348 26 Si 0.693 3.307 27 O -0.061 6.061 28 C -0.062 4.062 29 C -0.168 4.168 30 H 0.137 0.863 31 H 0.142 0.858 32 H 0.146 0.854 33 H 0.139 0.861 34 H 0.134 0.866 35 H 0.144 0.856 36 H 0.169 0.831 37 H 0.156 0.844 38 H 0.098 0.902 39 H 0.128 0.872 40 H 0.251 0.749 41 H 0.271 0.729 42 H 0.173 0.827 43 H 0.173 0.827 44 H 0.184 0.816 45 H 0.171 0.829 46 H 0.159 0.841 47 H 0.240 0.760 48 H -0.219 1.219 49 H -0.188 1.188 50 H 0.179 0.821 51 H 0.133 0.867 52 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -19.893 22.447 9.894 31.584 hybrid contribution 0.509 -1.617 1.048 1.993 sum -19.385 20.830 10.942 30.486 Atomic orbital electron populations 1.24127 0.75454 1.09470 1.09770 1.44825 1.15967 1.19324 1.14469 0.72427 1.24292 1.05659 1.02655 0.87468 1.23900 0.94839 1.03615 0.88715 1.22699 0.92751 1.00853 0.97258 0.85496 1.23869 0.97395 1.00097 0.97727 1.22738 0.96760 0.82852 0.98549 0.89521 1.45801 1.13374 1.15737 1.60868 1.18142 0.82490 0.86258 0.78370 1.90830 1.53843 1.56227 1.42999 1.20309 0.94940 0.95617 1.07513 1.18917 0.87179 0.88552 0.93868 1.84726 1.58974 1.61727 1.25514 1.21568 1.01942 0.91996 1.01607 1.21388 0.90848 1.00864 0.93726 1.17658 0.92484 0.92621 1.01371 1.20348 0.83526 0.94737 1.03512 1.22143 1.01137 0.94641 1.03611 1.21805 0.93286 1.01289 1.04512 1.23021 0.98154 0.85930 1.02609 1.24864 0.86001 1.07315 0.98359 1.86675 1.73022 1.49012 1.26134 0.93608 0.78426 0.76638 0.82023 1.83859 1.24704 1.37759 1.59794 1.21414 0.99581 0.91228 0.93964 1.23357 0.95565 1.01312 0.96538 0.86309 0.85823 0.85389 0.86075 0.86593 0.85565 0.83132 0.84358 0.90235 0.87217 0.74854 0.72935 0.82739 0.82674 0.81615 0.82883 0.84105 0.76020 1.21853 1.18826 0.82122 0.86697 0.90185 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.98 9.19 127.69 1.17 4.15 16 2 N -0.37 24.39 0.66 -948.83 -0.62 23.77 16 3 H 0.44 -30.47 8.42 -89.70 -0.75 -31.22 16 4 C -0.06 3.60 8.55 127.69 1.09 4.69 16 5 C 0.01 -0.70 4.57 86.30 0.39 -0.31 16 6 C -0.12 6.18 3.34 -10.27 -0.03 6.14 16 7 H 0.13 -6.91 8.11 -2.39 -0.02 -6.93 16 8 C -0.15 6.88 5.60 31.12 0.17 7.05 16 9 C 0.10 -3.30 4.24 45.52 0.19 -3.11 16 10 H 0.09 -2.31 7.46 -2.39 -0.02 -2.33 16 11 N -0.71 20.40 5.31 -443.17 -2.35 18.04 16 12 C 0.56 -9.97 7.76 86.70 0.67 -9.30 16 13 O -0.56 5.17 14.74 17.00 0.25 5.42 16 14 C -0.18 3.14 5.88 -20.05 -0.12 3.02 16 15 C 0.16 -2.29 6.72 22.89 0.15 -2.14 16 16 O -0.50 5.68 11.55 -68.58 -0.79 4.89 16 17 C -0.15 2.58 9.96 22.30 0.22 2.81 16 18 C -0.05 0.93 9.54 22.55 0.22 1.14 16 19 C -0.04 0.75 5.87 -20.13 -0.12 0.63 16 20 C 0.03 -0.47 7.03 24.27 0.17 -0.30 16 21 C -0.20 2.99 10.26 22.40 0.23 3.22 16 22 C -0.19 2.65 10.78 22.13 0.24 2.88 16 23 C -0.05 0.78 6.20 24.87 0.15 0.93 16 24 C -0.06 1.10 2.98 71.23 0.21 1.31 16 25 O -0.54 8.26 12.88 -148.98 -1.92 6.34 16 26 Si 0.79 -18.64 32.11 68.60 2.20 -16.43 16 27 O -0.16 2.93 8.80 -6.63 -0.06 2.87 16 28 C -0.04 0.92 9.20 22.79 0.21 1.13 16 29 C -0.13 5.68 7.39 31.12 0.23 5.91 16 30 H 0.12 -7.48 8.14 -2.39 -0.02 -7.50 16 31 H 0.12 -7.81 8.14 -2.39 -0.02 -7.83 16 32 H 0.13 -8.23 8.11 -2.39 -0.02 -8.25 16 33 H 0.12 -7.39 8.11 -2.39 -0.02 -7.41 16 34 H 0.12 -6.80 5.02 -2.39 -0.01 -6.81 16 35 H 0.13 -7.76 8.14 -2.39 -0.02 -7.78 16 36 H 0.15 -9.66 8.09 -2.38 -0.02 -9.68 16 37 H 0.14 -8.69 7.82 -2.39 -0.02 -8.71 16 38 H 0.08 -3.41 7.15 -2.39 -0.02 -3.42 16 39 H 0.11 -5.21 7.92 -2.39 -0.02 -5.23 16 40 H 0.41 -14.24 6.75 -92.71 -0.63 -14.86 16 41 H 0.41 -7.67 9.06 -74.05 -0.67 -8.34 16 42 H 0.15 -2.96 8.06 -2.91 -0.02 -2.99 16 43 H 0.16 -3.40 6.96 -2.91 -0.02 -3.42 16 44 H 0.17 -3.08 7.25 -2.91 -0.02 -3.10 16 45 H 0.15 -2.19 8.06 -2.91 -0.02 -2.21 16 46 H 0.14 -2.83 7.96 -2.39 -0.02 -2.85 16 47 H 0.39 -8.44 8.70 -74.06 -0.64 -9.09 16 48 H -0.29 4.74 7.11 99.48 0.71 5.44 16 49 H -0.26 6.02 7.11 99.48 0.71 6.73 16 50 H 0.16 -4.55 6.24 -2.91 -0.02 -4.57 16 51 H 0.11 -5.40 8.08 -2.38 -0.02 -5.42 16 52 H 0.08 -3.22 8.14 -2.39 -0.02 -3.24 16 Total: 1.00 -86.77 421.23 0.51 -86.26 By element: Atomic # 1 Polarization: -159.36 SS G_CDS: -1.67 Total: -161.03 kcal Atomic # 6 Polarization: 24.41 SS G_CDS: 5.47 Total: 29.87 kcal Atomic # 7 Polarization: 44.79 SS G_CDS: -2.98 Total: 41.81 kcal Atomic # 8 Polarization: 22.03 SS G_CDS: -2.52 Total: 19.51 kcal Atomic # 14 Polarization: -18.64 SS G_CDS: 2.20 Total: -16.43 kcal Total: -86.77 0.51 -86.26 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13259648.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 159.400 kcal (2) G-P(sol) polarization free energy of solvation -86.772 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.628 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.508 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -86.264 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.136 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds