Wall clock time and date at job start Sun Mar 7 2021 06:25:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46909 * 1 3 3 H 1.00894 * 109.46971 * 2 1 4 4 C 1.46903 * 109.46888 * 119.99761 * 2 1 3 5 5 C 1.46896 * 109.47184 * 239.99765 * 2 1 3 6 6 C 1.53001 * 109.47293 * 64.99834 * 5 2 1 7 7 H 1.08999 * 112.84834 * 43.80630 * 6 5 2 8 8 C 1.53778 * 113.61263 * 174.99736 * 6 5 2 9 9 C 1.53787 * 87.08035 * 139.98349 * 8 6 5 10 10 H 1.09004 * 113.61202 * 89.11582 * 9 8 6 11 11 N 1.46496 * 113.61566 * 220.01945 * 9 8 6 12 12 C 1.34776 * 120.00015 * 205.00016 * 11 9 8 13 13 O 1.21586 * 119.99944 * 359.97438 * 12 11 9 14 14 C 1.47652 * 120.00212 * 180.02562 * 12 11 9 15 15 C 1.40166 * 119.97358 * 359.71810 * 14 12 11 16 16 C 1.36351 * 120.67077 * 179.76122 * 15 14 12 17 17 C 1.39328 * 120.23756 * 0.52270 * 16 15 14 18 18 N 1.37397 * 133.25661 * 179.71968 * 17 16 15 19 19 C 1.36872 * 109.98230 * 180.02562 * 18 17 16 20 20 C 1.34181 * 109.96420 * 359.97438 * 19 18 17 21 21 C 1.50698 * 126.53843 * 180.02562 * 20 19 18 22 22 O 1.42904 * 109.47442 * 104.94449 * 21 20 19 23 23 Si 1.86300 * 109.47268 * 344.93898 * 21 20 19 24 24 C 1.40910 * 119.63909 * 359.73684 * 17 16 15 25 25 C 1.39191 * 119.97524 * 180.02562 * 14 12 11 26 26 C 1.53778 * 113.61526 * 272.49822 * 6 5 2 27 27 H 1.08996 * 109.46958 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.46932 * 300.00197 * 1 2 3 29 29 H 1.08998 * 109.46607 * 60.00624 * 1 2 3 30 30 H 1.08995 * 109.46695 * 179.97438 * 4 2 1 31 31 H 1.09000 * 109.46951 * 300.00112 * 4 2 1 32 32 H 1.08997 * 109.46969 * 59.99852 * 4 2 1 33 33 H 1.09008 * 109.47110 * 305.00045 * 5 2 1 34 34 H 1.09000 * 109.47263 * 184.99942 * 5 2 1 35 35 H 1.08998 * 113.61879 * 25.43831 * 8 6 5 36 36 H 1.08997 * 113.69304 * 254.53918 * 8 6 5 37 37 H 0.96998 * 120.00377 * 24.99850 * 11 9 8 38 38 H 1.08003 * 119.66426 * 0.02562 * 15 14 12 39 39 H 1.07997 * 119.88577 * 180.25977 * 16 15 14 40 40 H 0.97001 * 125.00933 * 0.02562 * 18 17 16 41 41 H 1.07996 * 125.01551 * 179.97438 * 19 18 17 42 42 H 1.09003 * 109.47437 * 224.93952 * 21 20 19 43 43 H 0.96701 * 113.99630 * 299.99361 * 22 21 20 44 44 H 1.48497 * 110.00048 * 180.02562 * 23 21 20 45 45 H 1.48503 * 109.99947 * 301.32455 * 23 21 20 46 46 H 1.07996 * 120.30216 * 359.94648 * 25 14 12 47 47 H 1.08993 * 113.61229 * 105.47191 * 26 6 5 48 48 H 1.09000 * 113.61263 * 334.56841 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 1 1.8054 0.9512 0.0000 4 6 1.9587 -0.6925 1.1995 5 6 1.9588 -0.6925 -1.1994 6 6 1.5540 0.0976 -2.4455 7 1 1.7120 1.1705 -2.3362 8 6 2.1236 -0.4790 -3.7524 9 6 0.7624 -0.1614 -4.3936 10 1 0.7027 0.8410 -4.8176 11 7 0.2910 -1.1990 -5.3142 12 6 -0.5701 -0.8830 -6.3017 13 8 -0.9560 0.2630 -6.4282 14 6 -1.0457 -1.9288 -7.2292 15 6 -0.5967 -3.2489 -7.0859 16 6 -1.0303 -4.2267 -7.9314 17 6 -1.9204 -3.9218 -8.9590 18 7 -2.5139 -4.6732 -9.9444 19 6 -3.3211 -3.8805 -10.7148 20 6 -3.2824 -2.6158 -10.2680 21 6 -4.0293 -1.4388 -10.8405 22 8 -5.1269 -1.1099 -9.9864 23 14 -4.6697 -1.8741 -12.5349 24 6 -2.3751 -2.5975 -9.1170 25 6 -1.9346 -1.6018 -8.2492 26 6 0.1608 -0.2703 -2.9825 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3632 0.5137 -0.8900 30 1 3.0487 -0.6928 1.1992 31 1 1.5953 -0.1786 2.0894 32 1 1.5953 -1.7201 1.1995 33 1 1.5241 -1.6911 -1.2453 34 1 3.0451 -0.7707 -1.1557 35 1 2.3434 -1.5453 -3.7000 36 1 2.9473 0.1031 -4.1656 37 1 0.5986 -2.1133 -5.2131 38 1 0.0966 -3.4947 -6.2950 39 1 -0.6794 -5.2405 -7.8067 40 1 -2.3806 -5.6251 -10.0749 41 1 -3.9031 -4.2224 -11.5578 42 1 -3.3578 -0.5834 -10.9146 43 1 -5.7664 -1.8264 -9.8743 44 1 -5.4078 -0.7213 -13.1106 45 1 -3.5407 -2.2489 -13.4238 46 1 -2.2799 -0.5853 -8.3659 47 1 -0.6002 0.4814 -2.7732 48 1 -0.1560 -1.2795 -2.7196 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_13287722.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:25:32 Heat of formation + Delta-G solvation = 121.734535 kcal Electronic energy + Delta-G solvation = -27874.127522 eV Core-core repulsion = 24015.178816 eV Total energy + Delta-G solvation = -3858.948705 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.181 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.50324 -42.21220 -40.94552 -39.16992 -37.96164 -37.43579 -34.77988 -33.29461 -31.09898 -30.61195 -29.82436 -29.47717 -26.71074 -26.52768 -26.06698 -24.98264 -23.51455 -23.29057 -21.63022 -21.12570 -20.68687 -19.34444 -19.07281 -18.45170 -18.08225 -17.53817 -17.50589 -17.09462 -16.83374 -16.28449 -16.10233 -15.96640 -15.66375 -15.54250 -15.18385 -14.90087 -14.80844 -14.50984 -14.13411 -13.95247 -13.82378 -13.65916 -13.57022 -13.51017 -13.38525 -13.27767 -13.08123 -12.87143 -12.63908 -12.42844 -12.32786 -12.23647 -11.97841 -11.78362 -11.50057 -11.09638 -10.84075 -10.38744 -10.13849 -9.35449 -8.84718 -5.06338 -0.19998 0.17515 1.04468 1.30369 1.48547 1.65260 1.78689 1.98742 2.07953 2.12162 2.83969 2.90266 2.97995 3.21871 3.34828 3.46964 3.56880 3.60135 3.69263 3.73326 3.80601 3.83039 3.89417 3.97759 4.09747 4.16643 4.22182 4.33649 4.34251 4.40629 4.41494 4.46919 4.52180 4.57155 4.68176 4.70772 4.73284 4.76891 4.78617 4.85364 4.89390 4.94885 4.95381 5.06448 5.17845 5.22576 5.30802 5.45064 5.54215 5.54981 5.95252 6.46409 6.55826 6.81756 7.15716 Molecular weight = 331.18amu Principal moments of inertia in cm(-1) A = 0.023683 B = 0.002260 C = 0.002170 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1181.994047 B =12388.658222 C =12900.679172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.370 5.370 3 H 0.438 0.562 4 C -0.046 4.046 5 C 0.013 3.987 6 C -0.115 4.115 7 H 0.124 0.876 8 C -0.126 4.126 9 C 0.091 3.909 10 H 0.081 0.919 11 N -0.700 5.700 12 C 0.561 3.439 13 O -0.592 6.592 14 C -0.182 4.182 15 C -0.062 4.062 16 C -0.128 4.128 17 C 0.109 3.891 18 N -0.573 5.573 19 C 0.084 3.916 20 C -0.227 4.227 21 C -0.046 4.046 22 O -0.563 6.563 23 Si 0.801 3.199 24 C -0.131 4.131 25 C -0.027 4.027 26 C -0.152 4.152 27 H 0.123 0.877 28 H 0.126 0.874 29 H 0.113 0.887 30 H 0.128 0.872 31 H 0.123 0.877 32 H 0.120 0.880 33 H 0.141 0.859 34 H 0.151 0.849 35 H 0.117 0.883 36 H 0.077 0.923 37 H 0.417 0.583 38 H 0.170 0.830 39 H 0.161 0.839 40 H 0.439 0.561 41 H 0.215 0.785 42 H 0.085 0.915 43 H 0.394 0.606 44 H -0.310 1.310 45 H -0.282 1.282 46 H 0.102 0.898 47 H 0.074 0.926 48 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.087 -4.532 32.081 35.329 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 N 0.053 4.947 3 H 0.275 0.725 4 C -0.188 4.188 5 C -0.109 4.109 6 C -0.134 4.134 7 H 0.142 0.858 8 C -0.164 4.164 9 C -0.013 4.013 10 H 0.099 0.901 11 N -0.352 5.352 12 C 0.351 3.649 13 O -0.473 6.473 14 C -0.187 4.187 15 C -0.082 4.082 16 C -0.148 4.148 17 C -0.001 4.001 18 N -0.177 5.177 19 C -0.044 4.044 20 C -0.234 4.234 21 C -0.155 4.155 22 O -0.371 6.371 23 Si 0.706 3.294 24 C -0.136 4.136 25 C -0.047 4.047 26 C -0.190 4.190 27 H 0.141 0.859 28 H 0.144 0.856 29 H 0.131 0.869 30 H 0.146 0.854 31 H 0.142 0.858 32 H 0.138 0.862 33 H 0.159 0.841 34 H 0.169 0.831 35 H 0.136 0.864 36 H 0.096 0.904 37 H 0.256 0.744 38 H 0.187 0.813 39 H 0.179 0.821 40 H 0.280 0.720 41 H 0.232 0.768 42 H 0.103 0.897 43 H 0.244 0.756 44 H -0.238 1.238 45 H -0.209 1.209 46 H 0.120 0.880 47 H 0.093 0.907 48 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 14.078 -3.398 31.175 34.374 hybrid contribution 0.345 0.579 -0.411 0.790 sum 14.423 -2.819 30.764 34.093 Atomic orbital electron populations 1.24272 0.76830 1.09638 1.09252 1.44842 1.15500 1.19584 1.14754 0.72514 1.24131 1.05815 1.02347 0.86461 1.23902 1.06186 0.99301 0.81554 1.22677 0.95706 1.02028 0.93015 0.85757 1.23336 0.95191 1.03976 0.93939 1.22747 0.97188 0.92274 0.89122 0.90118 1.45692 1.45742 1.13438 1.30348 1.18421 0.78532 0.87173 0.80796 1.90785 1.59389 1.23045 1.74103 1.19653 1.04207 0.95156 0.99639 1.20886 0.98523 0.89618 0.99171 1.20137 0.98516 1.01850 0.94311 1.18718 0.97801 0.90417 0.93116 1.41818 1.38818 1.11827 1.25220 1.22214 0.95655 0.89216 0.97303 1.20830 1.06068 0.95991 1.00537 1.24586 0.89588 0.96164 1.05182 1.86479 1.35998 1.44145 1.70509 0.94100 0.80313 0.84000 0.70964 1.19220 1.02004 0.93464 0.98894 1.20621 0.93809 0.97980 0.92315 1.23866 0.97042 1.04175 0.93962 0.85871 0.85556 0.86888 0.85401 0.85838 0.86150 0.84051 0.83101 0.86446 0.90402 0.74395 0.81293 0.82102 0.71980 0.76829 0.89736 0.75644 1.23834 1.20886 0.88023 0.90701 0.86858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.49 8.57 127.69 1.09 4.58 16 2 N -0.37 24.20 0.66 -948.83 -0.62 23.57 16 3 H 0.44 -30.01 8.40 -89.70 -0.75 -30.77 16 4 C -0.05 2.93 9.19 127.69 1.17 4.10 16 5 C 0.01 -0.77 4.57 86.30 0.39 -0.37 16 6 C -0.12 5.95 3.31 -10.27 -0.03 5.91 16 7 H 0.12 -6.56 8.09 -2.39 -0.02 -6.58 16 8 C -0.13 5.36 7.39 31.12 0.23 5.59 16 9 C 0.09 -2.93 4.24 45.52 0.19 -2.74 16 10 H 0.08 -1.88 7.47 -2.39 -0.02 -1.90 16 11 N -0.70 18.65 5.30 -443.07 -2.35 16.30 16 12 C 0.56 -7.55 7.76 86.73 0.67 -6.88 16 13 O -0.59 1.66 15.93 -3.99 -0.06 1.60 16 14 C -0.18 2.36 5.87 -20.09 -0.12 2.24 16 15 C -0.06 1.33 9.46 22.30 0.21 1.54 16 16 C -0.13 2.58 10.00 22.09 0.22 2.80 16 17 C 0.11 -1.62 7.27 39.19 0.28 -1.34 16 18 N -0.57 11.24 6.05 -187.49 -1.13 10.10 16 19 C 0.08 -1.52 10.43 82.98 0.87 -0.65 16 20 C -0.23 2.54 5.58 -18.62 -0.10 2.44 16 21 C -0.05 0.44 3.06 71.24 0.22 0.65 16 22 O -0.56 4.53 12.88 -148.98 -1.92 2.61 16 23 Si 0.80 -10.83 30.76 68.60 2.11 -8.72 16 24 C -0.13 1.12 6.34 -20.21 -0.13 0.99 16 25 C -0.03 0.17 9.64 22.74 0.22 0.39 16 26 C -0.15 6.53 5.69 31.12 0.18 6.71 16 27 H 0.12 -7.45 8.11 -2.39 -0.02 -7.46 16 28 H 0.13 -7.66 8.14 -2.39 -0.02 -7.68 16 29 H 0.11 -6.45 5.13 -2.39 -0.01 -6.47 16 30 H 0.13 -8.19 8.11 -2.39 -0.02 -8.21 16 31 H 0.12 -7.76 8.14 -2.39 -0.02 -7.78 16 32 H 0.12 -7.58 8.14 -2.39 -0.02 -7.60 16 33 H 0.14 -8.87 7.79 -2.38 -0.02 -8.88 16 34 H 0.15 -9.62 8.09 -2.39 -0.02 -9.63 16 35 H 0.12 -5.44 8.08 -2.39 -0.02 -5.46 16 36 H 0.08 -3.02 8.14 -2.39 -0.02 -3.04 16 37 H 0.42 -14.14 6.73 -92.71 -0.62 -14.77 16 38 H 0.17 -5.32 6.36 -2.91 -0.02 -5.34 16 39 H 0.16 -4.32 8.06 -2.91 -0.02 -4.34 16 40 H 0.44 -11.57 8.96 -92.71 -0.83 -12.40 16 41 H 0.22 -5.61 6.35 -2.91 -0.02 -5.63 16 42 H 0.09 -0.45 7.96 -2.39 -0.02 -0.47 16 43 H 0.39 -6.84 8.70 -74.06 -0.64 -7.48 16 44 H -0.31 1.26 7.11 99.48 0.71 1.96 16 45 H -0.28 2.59 7.11 99.48 0.71 3.29 16 46 H 0.10 -0.04 7.64 -2.91 -0.02 -0.06 16 47 H 0.07 -2.98 7.18 -2.39 -0.02 -3.00 16 48 H 0.11 -5.22 7.90 -2.39 -0.02 -5.24 16 Total: 1.00 -93.29 381.87 -0.21 -93.50 By element: Atomic # 1 Polarization: -163.14 SS G_CDS: -1.80 Total: -164.94 kcal Atomic # 6 Polarization: 20.41 SS G_CDS: 5.57 Total: 25.98 kcal Atomic # 7 Polarization: 54.08 SS G_CDS: -4.11 Total: 49.97 kcal Atomic # 8 Polarization: 6.20 SS G_CDS: -1.98 Total: 4.21 kcal Atomic # 14 Polarization: -10.83 SS G_CDS: 2.11 Total: -8.72 kcal Total: -93.29 -0.21 -93.50 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13287722.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 215.231 kcal (2) G-P(sol) polarization free energy of solvation -93.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 121.944 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -93.497 kcal (6) G-S(sol) free energy of system = (1) + (5) 121.735 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds