Wall clock time and date at job start Sun Mar 7 2021 06:25:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 H 1.00899 * 109.47082 * 2 1 4 4 C 1.46895 * 109.47206 * 120.00193 * 2 1 3 5 5 C 1.46906 * 109.47123 * 240.00221 * 2 1 3 6 6 C 1.53002 * 109.47053 * 174.99773 * 5 2 1 7 7 H 1.08999 * 112.85305 * 316.20011 * 6 5 2 8 8 C 1.53786 * 113.61152 * 87.50668 * 6 5 2 9 9 C 1.53777 * 87.08027 * 139.98154 * 8 6 5 10 10 H 1.09003 * 113.69255 * 89.12508 * 9 8 6 11 11 N 1.46502 * 113.61200 * 220.02076 * 9 8 6 12 12 C 1.34774 * 119.99557 * 252.49623 * 11 9 8 13 13 O 1.21512 * 120.00405 * 359.97438 * 12 11 9 14 14 C 1.48177 * 120.00122 * 180.02562 * 12 11 9 15 15 N 1.32717 * 119.71800 * 359.71958 * 14 12 11 16 16 C 1.31520 * 121.64107 * 179.75317 * 15 14 12 17 17 C 1.38566 * 120.90343 * 0.52918 * 16 15 14 18 18 C 1.50696 * 120.32333 * 179.71858 * 17 16 15 19 19 O 1.42905 * 109.47164 * 245.02411 * 18 17 16 20 20 Si 1.86293 * 109.47408 * 5.02389 * 18 17 16 21 21 C 1.38626 * 119.34729 * 359.74576 * 17 16 15 22 22 C 1.38590 * 118.49034 * 359.97438 * 21 17 16 23 23 C 1.53784 * 87.08260 * 334.56310 * 9 8 6 24 24 H 1.08996 * 109.46863 * 179.97438 * 1 2 3 25 25 H 1.09002 * 109.47150 * 299.99580 * 1 2 3 26 26 H 1.08993 * 109.46945 * 59.99752 * 1 2 3 27 27 H 1.08992 * 109.47681 * 299.99849 * 4 2 1 28 28 H 1.09006 * 109.47366 * 60.00059 * 4 2 1 29 29 H 1.09007 * 109.47245 * 179.97438 * 4 2 1 30 30 H 1.08992 * 109.47459 * 294.99856 * 5 2 1 31 31 H 1.09004 * 109.47040 * 55.00007 * 5 2 1 32 32 H 1.09002 * 113.61282 * 254.52727 * 8 6 5 33 33 H 1.08997 * 113.61343 * 25.42688 * 8 6 5 34 34 H 0.96994 * 120.00377 * 72.49752 * 11 9 8 35 35 H 1.08001 * 119.55320 * 180.27042 * 16 15 14 36 36 H 1.09001 * 109.47033 * 125.02461 * 18 17 16 37 37 H 0.96697 * 114.00014 * 59.99941 * 19 18 17 38 38 H 1.48500 * 110.00191 * 180.02562 * 20 18 17 39 39 H 1.48506 * 110.00202 * 301.32021 * 20 18 17 40 40 H 1.07999 * 120.75131 * 180.02562 * 21 17 16 41 41 H 1.07997 * 120.46604 * 179.97438 * 22 21 17 42 42 H 1.08994 * 113.61900 * 270.88925 * 23 9 8 43 43 H 1.09001 * 113.68931 * 139.98988 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9587 -0.6925 -1.1995 6 6 3.4835 -0.5844 -1.2640 7 1 3.8474 0.4157 -1.0285 8 6 4.2131 -1.7029 -0.5011 9 6 5.2160 -1.7357 -1.6664 10 1 6.0552 -1.0514 -1.5414 11 7 5.6357 -3.0883 -2.0414 12 6 6.8780 -3.5160 -1.7408 13 8 7.6500 -2.7796 -1.1592 14 6 7.3028 -4.8838 -2.1205 15 7 6.4537 -5.6851 -2.7516 16 6 6.7924 -6.9042 -3.1104 17 6 8.0543 -7.4036 -2.8308 18 6 8.4264 -8.8047 -3.2424 19 8 8.6573 -9.5983 -2.0765 20 14 7.0375 -9.5498 -4.2356 21 6 8.9708 -6.6020 -2.1682 22 6 8.5882 -5.3197 -1.8073 23 6 4.0890 -1.1737 -2.5489 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8899 27 1 1.5955 -0.1788 2.0894 28 1 1.5954 -1.7202 1.1994 29 1 3.0487 -0.6929 1.1991 30 1 1.6704 -1.7427 -1.1559 31 1 1.5241 -0.2329 -2.0872 32 1 4.6501 -1.3749 0.4420 33 1 3.6282 -2.6173 -0.4024 34 1 5.0197 -3.6760 -2.5060 35 1 6.0758 -7.5261 -3.6264 36 1 9.3321 -8.7770 -3.8482 37 1 7.8918 -9.6671 -1.4897 38 1 7.3919 -10.9320 -4.6471 39 1 5.7890 -9.5641 -3.4317 40 1 9.9607 -6.9681 -1.9392 41 1 9.2766 -4.6682 -1.2897 42 1 3.4703 -1.9434 -3.0100 43 1 4.4246 -0.4184 -3.2596 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_13287726.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:25:36 Heat of formation + Delta-G solvation = 103.171877 kcal Electronic energy + Delta-G solvation = -23249.888962 eV Core-core repulsion = 19802.125220 eV Total energy + Delta-G solvation = -3447.763743 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.165 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.28760 -41.84104 -40.53732 -39.04824 -38.04593 -34.94809 -33.68678 -33.01187 -30.19742 -29.50083 -27.95396 -26.70647 -25.83639 -25.09002 -24.40227 -23.19005 -21.84093 -21.11726 -19.22784 -19.07524 -18.75547 -18.13215 -17.71812 -17.33274 -16.78786 -16.64221 -16.43771 -16.26358 -16.15687 -15.88334 -15.24078 -14.77580 -14.44541 -14.36821 -14.31846 -13.92314 -13.57684 -13.53790 -13.52295 -13.40770 -13.29369 -13.08354 -12.85141 -12.68312 -12.37590 -12.16215 -11.79367 -11.52644 -11.42913 -11.12187 -10.73441 -10.72768 -10.43795 -10.07218 -4.96510 -0.65291 0.01539 1.04024 1.20222 1.47361 1.53319 1.93814 1.96780 2.60088 2.85947 2.92512 2.98090 3.21885 3.30097 3.34711 3.45441 3.47018 3.63664 3.71958 3.73235 3.80206 3.87897 3.97441 4.08684 4.15858 4.21609 4.33812 4.40571 4.42253 4.47451 4.54859 4.67027 4.70541 4.74018 4.77362 4.83983 4.85404 4.88821 4.94390 4.96335 5.06195 5.15355 5.32238 5.48506 6.21498 6.39185 6.54658 7.00912 Molecular weight = 293.17amu Principal moments of inertia in cm(-1) A = 0.024315 B = 0.003046 C = 0.002877 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1151.283367 B = 9189.147628 C = 9728.373587 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.369 5.369 3 H 0.439 0.561 4 C -0.058 4.058 5 C 0.012 3.988 6 C -0.114 4.114 7 H 0.130 0.870 8 C -0.152 4.152 9 C 0.090 3.910 10 H 0.091 0.909 11 N -0.688 5.688 12 C 0.571 3.429 13 O -0.568 6.568 14 C 0.062 3.938 15 N -0.452 5.452 16 C 0.101 3.899 17 C -0.139 4.139 18 C -0.083 4.083 19 O -0.545 6.545 20 Si 0.770 3.230 21 C -0.057 4.057 22 C -0.120 4.120 23 C -0.127 4.127 24 H 0.118 0.882 25 H 0.124 0.876 26 H 0.128 0.872 27 H 0.127 0.873 28 H 0.120 0.880 29 H 0.115 0.885 30 H 0.137 0.863 31 H 0.151 0.849 32 H 0.080 0.920 33 H 0.108 0.892 34 H 0.421 0.579 35 H 0.188 0.812 36 H 0.131 0.869 37 H 0.388 0.612 38 H -0.309 1.309 39 H -0.265 1.265 40 H 0.153 0.847 41 H 0.146 0.854 42 H 0.111 0.889 43 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -24.423 19.345 5.460 31.631 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.054 4.946 3 H 0.276 0.724 4 C -0.200 4.200 5 C -0.110 4.110 6 C -0.134 4.134 7 H 0.148 0.852 8 C -0.190 4.190 9 C -0.014 4.014 10 H 0.110 0.890 11 N -0.339 5.339 12 C 0.356 3.644 13 O -0.447 6.447 14 C -0.076 4.076 15 N -0.163 5.163 16 C -0.058 4.058 17 C -0.142 4.142 18 C -0.193 4.193 19 O -0.354 6.354 20 Si 0.675 3.325 21 C -0.083 4.083 22 C -0.141 4.141 23 C -0.166 4.166 24 H 0.137 0.863 25 H 0.142 0.858 26 H 0.146 0.854 27 H 0.145 0.855 28 H 0.139 0.861 29 H 0.133 0.867 30 H 0.156 0.844 31 H 0.169 0.831 32 H 0.099 0.901 33 H 0.126 0.874 34 H 0.260 0.740 35 H 0.204 0.796 36 H 0.149 0.851 37 H 0.238 0.762 38 H -0.237 1.237 39 H -0.191 1.191 40 H 0.171 0.829 41 H 0.163 0.837 42 H 0.129 0.871 43 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -24.847 19.308 5.389 31.926 hybrid contribution 1.502 -0.870 1.189 2.104 sum -23.346 18.438 6.579 30.467 Atomic orbital electron populations 1.24125 0.75414 1.09476 1.09767 1.44826 1.16002 1.19309 1.14430 0.72395 1.24272 1.05594 1.02666 0.87479 1.23891 0.94794 1.03596 0.88730 1.22702 0.92816 1.00755 0.97080 0.85208 1.23858 0.97383 1.00024 0.97784 1.22871 0.97091 0.82867 0.98572 0.89039 1.45766 1.13183 1.16510 1.58434 1.18004 0.82900 0.85089 0.78398 1.90808 1.54229 1.56420 1.43215 1.21215 0.92157 0.94948 0.99249 1.67520 1.34633 1.04789 1.09349 1.23041 0.94608 0.91790 0.96367 1.21643 0.95432 0.98132 0.98973 1.25258 1.13017 0.88128 0.92850 1.86644 1.42237 1.71401 1.35093 0.94150 0.73827 0.80531 0.84032 1.21737 1.00775 0.92088 0.93662 1.22282 0.96644 0.96837 0.98347 1.23330 0.95506 1.01209 0.96561 0.86321 0.85778 0.85404 0.85496 0.86115 0.86663 0.84446 0.83130 0.90103 0.87409 0.74038 0.79586 0.85119 0.76208 1.23707 1.19077 0.82885 0.83660 0.87066 0.90020 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.94 9.19 127.69 1.17 4.12 16 2 N -0.37 24.26 0.66 -948.85 -0.62 23.63 16 3 H 0.44 -30.43 8.40 -89.69 -0.75 -31.18 16 4 C -0.06 3.53 8.57 127.69 1.09 4.63 16 5 C 0.01 -0.73 4.57 86.30 0.39 -0.34 16 6 C -0.11 6.00 3.31 -10.26 -0.03 5.97 16 7 H 0.13 -7.07 8.09 -2.39 -0.02 -7.09 16 8 C -0.15 6.69 5.69 31.12 0.18 6.87 16 9 C 0.09 -3.02 4.24 45.52 0.19 -2.83 16 10 H 0.09 -2.45 7.46 -2.39 -0.02 -2.47 16 11 N -0.69 18.28 5.34 -442.59 -2.37 15.91 16 12 C 0.57 -9.40 7.81 86.89 0.68 -8.72 16 13 O -0.57 5.12 15.92 -3.75 -0.06 5.06 16 14 C 0.06 -0.98 6.75 41.91 0.28 -0.70 16 15 N -0.45 8.44 9.54 -184.91 -1.76 6.67 16 16 C 0.10 -2.04 9.84 84.82 0.83 -1.20 16 17 C -0.14 2.58 5.37 -19.69 -0.11 2.47 16 18 C -0.08 1.54 2.82 71.23 0.20 1.74 16 19 O -0.55 7.81 12.84 -148.98 -1.91 5.90 16 20 Si 0.77 -15.22 29.91 68.60 2.05 -13.16 16 21 C -0.06 0.94 9.83 22.45 0.22 1.16 16 22 C -0.12 1.76 9.63 22.61 0.22 1.98 16 23 C -0.13 5.47 7.39 31.12 0.23 5.70 16 24 H 0.12 -7.43 8.14 -2.39 -0.02 -7.45 16 25 H 0.12 -7.82 8.14 -2.39 -0.02 -7.84 16 26 H 0.13 -8.19 8.11 -2.39 -0.02 -8.21 16 27 H 0.13 -7.78 8.14 -2.39 -0.02 -7.80 16 28 H 0.12 -7.30 8.11 -2.38 -0.02 -7.32 16 29 H 0.11 -6.72 5.13 -2.38 -0.01 -6.73 16 30 H 0.14 -8.50 7.79 -2.39 -0.02 -8.52 16 31 H 0.15 -9.58 8.09 -2.38 -0.02 -9.60 16 32 H 0.08 -3.40 7.18 -2.39 -0.02 -3.42 16 33 H 0.11 -4.93 7.90 -2.39 -0.02 -4.95 16 34 H 0.42 -12.61 8.06 -92.71 -0.75 -13.36 16 35 H 0.19 -4.68 4.86 -2.91 -0.01 -4.70 16 36 H 0.13 -2.54 7.96 -2.39 -0.02 -2.56 16 37 H 0.39 -7.93 8.70 -74.06 -0.64 -8.58 16 38 H -0.31 2.94 7.11 99.48 0.71 3.64 16 39 H -0.26 4.83 7.01 99.48 0.70 5.52 16 40 H 0.15 -2.74 8.06 -2.91 -0.02 -2.76 16 41 H 0.15 -2.02 7.64 -2.91 -0.02 -2.05 16 42 H 0.11 -5.00 8.08 -2.39 -0.02 -5.02 16 43 H 0.08 -3.25 8.14 -2.39 -0.02 -3.27 16 Total: 1.00 -80.63 345.53 -0.20 -80.82 By element: Atomic # 1 Polarization: -144.61 SS G_CDS: -1.08 Total: -145.68 kcal Atomic # 6 Polarization: 15.30 SS G_CDS: 5.56 Total: 20.86 kcal Atomic # 7 Polarization: 50.97 SS G_CDS: -4.75 Total: 46.22 kcal Atomic # 8 Polarization: 12.93 SS G_CDS: -1.97 Total: 10.95 kcal Atomic # 14 Polarization: -15.22 SS G_CDS: 2.05 Total: -13.16 kcal Total: -80.63 -0.20 -80.82 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13287726.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 183.993 kcal (2) G-P(sol) polarization free energy of solvation -80.626 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 103.367 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.195 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -80.821 kcal (6) G-S(sol) free energy of system = (1) + (5) 103.172 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds