Wall clock time and date at job start Sun Mar 7 2021 06:25:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46507 * 1 3 3 C 1.34657 * 124.84636 * 2 1 4 4 C 1.36773 * 108.39423 * 180.02562 * 3 2 1 5 5 C 1.47260 * 126.94354 * 180.02562 * 4 3 2 6 6 O 1.21625 * 120.00263 * 180.02562 * 5 4 3 7 7 N 1.34781 * 120.00151 * 0.02562 * 5 4 3 8 8 C 1.46493 * 120.00279 * 180.02562 * 7 5 4 9 9 H 1.09003 * 112.84820 * 336.19884 * 8 7 5 10 10 C 1.53781 * 113.61563 * 107.50461 * 8 7 5 11 11 C 1.54049 * 87.08031 * 139.97721 * 10 8 7 12 12 H 1.09000 * 113.61076 * 89.06984 * 11 10 8 13 13 C 1.52990 * 113.70090 * 220.05426 * 11 10 8 14 14 N 1.46901 * 109.47276 * 272.42503 * 13 11 10 15 15 H 1.00906 * 109.46794 * 304.99706 * 14 13 11 16 16 C 1.46901 * 109.47092 * 64.99475 * 14 13 11 17 17 C 1.46894 * 109.47616 * 184.99709 * 14 13 11 18 18 C 1.53781 * 113.61552 * 205.00255 * 8 7 5 19 19 C 1.46689 * 106.11477 * 0.25408 * 4 3 2 20 20 C 1.34488 * 106.33092 * 359.57599 * 19 4 3 21 21 C 1.50699 * 125.57244 * 180.14484 * 20 19 4 22 22 O 1.42900 * 109.47016 * 150.33074 * 21 20 19 23 23 Si 1.86309 * 109.46881 * 30.33274 * 21 20 19 24 24 H 1.08998 * 109.46876 * 89.97569 * 1 2 3 25 25 H 1.08996 * 109.47163 * 209.98095 * 1 2 3 26 26 H 1.09004 * 109.47180 * 329.97748 * 1 2 3 27 27 H 1.07999 * 125.80817 * 359.97438 * 3 2 1 28 28 H 0.97006 * 119.99341 * 0.02562 * 7 5 4 29 29 H 1.09005 * 113.61471 * 254.53304 * 10 8 7 30 30 H 1.08996 * 113.61178 * 25.34646 * 10 8 7 31 31 H 1.09007 * 109.47036 * 32.41747 * 13 11 10 32 32 H 1.08994 * 109.47734 * 152.42153 * 13 11 10 33 33 H 1.09003 * 109.46999 * 180.02562 * 16 14 13 34 34 H 1.09002 * 109.47028 * 299.99892 * 16 14 13 35 35 H 1.09001 * 109.47292 * 60.00474 * 16 14 13 36 36 H 1.09003 * 109.47106 * 59.99817 * 17 14 13 37 37 H 1.08999 * 109.47787 * 179.97438 * 17 14 13 38 38 H 1.09005 * 109.47185 * 300.00383 * 17 14 13 39 39 H 1.09002 * 113.61445 * 334.56837 * 18 8 7 40 40 H 1.09002 * 113.61408 * 105.38567 * 18 8 7 41 41 H 1.07996 * 126.83579 * 179.73719 * 19 4 3 42 42 H 1.08996 * 109.47080 * 270.33581 * 21 20 19 43 43 H 0.96701 * 114.00434 * 299.99662 * 22 21 20 44 44 H 1.48495 * 109.99901 * 58.68537 * 23 21 20 45 45 H 1.48500 * 109.99651 * 179.97438 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7177 -0.0006 5 6 4.7284 1.5958 -0.0003 6 8 5.8446 1.1129 -0.0013 7 7 4.5734 2.9347 0.0012 8 6 5.7494 3.8083 0.0010 9 1 6.6376 3.3224 0.4050 10 6 5.9899 4.5172 -1.3423 11 6 6.3669 5.7674 -0.5252 12 1 7.4244 5.8169 -0.2657 13 6 5.8381 7.0737 -1.1206 14 7 6.8060 7.5951 -2.0949 15 1 7.7088 7.6902 -1.6542 16 6 6.9097 6.6655 -3.2276 17 6 6.3563 8.9074 -2.5780 18 6 5.4830 5.2001 0.5981 19 6 3.5376 -0.7491 -0.0072 20 6 2.2448 -1.1197 -0.0005 21 6 1.7398 -2.5396 -0.0005 22 8 0.4811 -2.5975 0.6736 23 14 2.9653 -3.6345 0.8771 24 1 -0.3633 0.0004 -1.0277 25 1 -0.3633 -0.8901 0.5135 26 1 -0.3634 0.8898 0.5142 27 1 1.8767 2.1241 -0.0004 28 1 3.6830 3.3198 0.0024 29 1 6.8205 4.1014 -1.9129 30 1 5.0861 4.6401 -1.9391 31 1 4.8864 6.8871 -1.6183 32 1 5.6947 7.8042 -0.3245 33 1 7.6283 7.0521 -3.9504 34 1 7.2435 5.6917 -2.8692 35 1 5.9345 6.5627 -3.7037 36 1 6.2794 9.5971 -1.7375 37 1 7.0747 9.2944 -3.3006 38 1 5.3810 8.8046 -3.0540 39 1 4.4404 5.5111 0.5325 40 1 5.9031 5.3353 1.5948 41 1 4.3981 -1.4016 -0.0133 42 1 1.6178 -2.8817 -1.0282 43 1 0.5147 -2.3067 1.5952 44 1 3.1645 -3.1593 2.2698 45 1 2.4786 -5.0375 0.8844 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_13287730.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:25:40 Heat of formation + Delta-G solvation = 116.360942 kcal Electronic energy + Delta-G solvation = -23999.531892 eV Core-core repulsion = 20525.028592 eV Total energy + Delta-G solvation = -3474.503300 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.181 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.50553 -42.14854 -40.50565 -38.84741 -37.99513 -34.65127 -33.71215 -31.52014 -30.02609 -29.47209 -27.63942 -26.66147 -26.48284 -25.67053 -24.29107 -22.84541 -21.33015 -20.82444 -20.52119 -19.06311 -18.99102 -18.00107 -17.50597 -17.35931 -17.01761 -16.81493 -16.53602 -16.02519 -15.85921 -15.63145 -15.40758 -15.02905 -14.57997 -14.43849 -14.16897 -13.89148 -13.55206 -13.51304 -13.48489 -13.36440 -13.27581 -13.24413 -13.12743 -13.00278 -12.76280 -12.44295 -12.26994 -12.02446 -11.73490 -11.44097 -10.99177 -10.94621 -10.05503 -9.57979 -9.23118 -4.96458 0.72690 0.98577 1.06119 1.41187 1.57697 1.77461 2.04147 2.31168 2.53767 2.92756 3.00166 3.11344 3.24492 3.38701 3.50885 3.53784 3.77696 3.81748 3.87594 3.92633 4.01423 4.18186 4.23604 4.29519 4.36789 4.40901 4.41515 4.43021 4.46883 4.52090 4.71026 4.74196 4.77589 4.79438 4.83268 4.88113 4.90077 4.93868 4.95876 5.00376 5.10482 5.28249 5.58958 5.66914 5.93186 6.21084 6.27542 6.64097 7.35819 Molecular weight = 295.18amu Principal moments of inertia in cm(-1) A = 0.030459 B = 0.002956 C = 0.002826 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 919.043136 B = 9470.545622 C = 9905.497070 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.045 3.955 2 N -0.428 5.428 3 C 0.074 3.926 4 C -0.265 4.265 5 C 0.589 3.411 6 O -0.595 6.595 7 N -0.707 5.707 8 C 0.096 3.904 9 H 0.081 0.919 10 C -0.151 4.151 11 C -0.117 4.117 12 H 0.125 0.875 13 C 0.013 3.987 14 N -0.370 5.370 15 H 0.438 0.562 16 C -0.057 4.057 17 C -0.046 4.046 18 C -0.127 4.127 19 C -0.157 4.157 20 C -0.027 4.027 21 C -0.043 4.043 22 O -0.539 6.539 23 Si 0.771 3.229 24 H 0.079 0.921 25 H 0.105 0.895 26 H 0.107 0.893 27 H 0.213 0.787 28 H 0.414 0.586 29 H 0.075 0.925 30 H 0.111 0.889 31 H 0.140 0.860 32 H 0.150 0.850 33 H 0.126 0.874 34 H 0.114 0.886 35 H 0.122 0.878 36 H 0.127 0.873 37 H 0.123 0.877 38 H 0.119 0.881 39 H 0.114 0.886 40 H 0.076 0.924 41 H 0.151 0.849 42 H 0.131 0.869 43 H 0.387 0.613 44 H -0.294 1.294 45 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.071 31.785 -9.197 33.836 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 N -0.101 5.101 3 C -0.064 4.064 4 C -0.275 4.275 5 C 0.379 3.621 6 O -0.477 6.477 7 N -0.358 5.358 8 C -0.009 4.009 9 H 0.100 0.900 10 C -0.189 4.189 11 C -0.136 4.136 12 H 0.143 0.857 13 C -0.109 4.109 14 N 0.053 4.947 15 H 0.275 0.725 16 C -0.200 4.200 17 C -0.188 4.188 18 C -0.165 4.165 19 C -0.181 4.181 20 C -0.136 4.136 21 C -0.153 4.153 22 O -0.348 6.348 23 Si 0.676 3.324 24 H 0.097 0.903 25 H 0.123 0.877 26 H 0.126 0.874 27 H 0.230 0.770 28 H 0.251 0.749 29 H 0.093 0.907 30 H 0.129 0.871 31 H 0.158 0.842 32 H 0.167 0.833 33 H 0.144 0.856 34 H 0.132 0.868 35 H 0.141 0.859 36 H 0.145 0.855 37 H 0.142 0.858 38 H 0.138 0.862 39 H 0.133 0.867 40 H 0.094 0.906 41 H 0.169 0.831 42 H 0.149 0.851 43 H 0.238 0.762 44 H -0.220 1.220 45 H -0.223 1.223 Dipole moment (debyes) X Y Z Total from point charges 7.167 30.643 -9.229 32.796 hybrid contribution -0.818 -0.153 1.031 1.325 sum 6.349 30.491 -8.198 32.206 Atomic orbital electron populations 1.22719 0.74835 1.06982 1.04921 1.43741 1.07965 1.04815 1.53618 1.22472 0.88923 0.93174 1.01794 1.20397 0.92602 0.93695 1.20776 1.17607 0.87298 0.82825 0.74346 1.90769 1.27707 1.76377 1.52805 1.45622 1.10585 1.04328 1.75232 1.22657 0.89145 0.89778 0.99354 0.90049 1.23891 1.03443 0.95272 0.96335 1.22736 1.02124 0.91982 0.96725 0.85733 1.23884 0.94340 0.97956 0.94704 1.44839 1.18862 1.15269 1.15680 0.72488 1.24271 1.09469 0.96352 0.89876 1.24123 1.06588 0.81967 1.06087 1.23323 1.02223 0.92108 0.98888 1.21841 0.95289 0.94207 1.06733 1.20731 0.90685 0.89617 1.12576 1.24669 0.92202 0.94557 1.03839 1.86555 1.29652 1.88703 1.29877 0.93486 0.84416 0.74564 0.79955 0.90251 0.87691 0.87409 0.77023 0.74864 0.90653 0.87096 0.84183 0.83258 0.85581 0.86755 0.85937 0.85468 0.85848 0.86198 0.86730 0.90561 0.83136 0.85134 0.76242 1.22049 1.22330 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -1.06 10.71 127.77 1.37 0.31 16 2 N -0.43 8.22 3.09 -533.23 -1.65 6.57 16 3 C 0.07 -1.66 10.83 83.92 0.91 -0.75 16 4 C -0.26 4.15 6.29 -19.04 -0.12 4.03 16 5 C 0.59 -9.13 7.81 86.61 0.68 -8.45 16 6 O -0.59 3.12 16.57 -4.11 -0.07 3.05 16 7 N -0.71 19.82 5.34 -443.46 -2.37 17.45 16 8 C 0.10 -3.17 4.24 45.52 0.19 -2.98 16 9 H 0.08 -2.01 7.46 -2.39 -0.02 -2.02 16 10 C -0.15 6.63 5.71 31.21 0.18 6.81 16 11 C -0.12 6.10 3.31 -10.18 -0.03 6.06 16 12 H 0.12 -6.66 8.10 -2.39 -0.02 -6.68 16 13 C 0.01 -0.81 4.57 86.30 0.39 -0.42 16 14 N -0.37 24.34 0.66 -948.85 -0.62 23.72 16 15 H 0.44 -30.25 8.41 -89.69 -0.75 -31.01 16 16 C -0.06 3.51 8.57 127.69 1.09 4.61 16 17 C -0.05 2.95 9.19 127.69 1.17 4.12 16 18 C -0.13 5.49 7.39 31.12 0.23 5.72 16 19 C -0.16 1.92 9.50 23.62 0.22 2.15 16 20 C -0.03 0.40 6.13 40.98 0.25 0.65 16 21 C -0.04 0.65 2.98 71.24 0.21 0.86 16 22 O -0.54 8.01 9.95 -148.98 -1.48 6.53 16 23 Si 0.77 -10.05 31.13 68.60 2.14 -7.91 16 24 H 0.08 -1.86 8.14 -2.39 -0.02 -1.88 16 25 H 0.10 -2.26 4.93 -2.39 -0.01 -2.27 16 26 H 0.11 -3.07 8.13 -2.38 -0.02 -3.09 16 27 H 0.21 -7.01 7.45 -2.91 -0.02 -7.03 16 28 H 0.41 -14.55 7.67 -92.70 -0.71 -15.26 16 29 H 0.07 -3.09 7.20 -2.38 -0.02 -3.10 16 30 H 0.11 -5.18 7.91 -2.39 -0.02 -5.20 16 31 H 0.14 -8.82 7.80 -2.38 -0.02 -8.84 16 32 H 0.15 -9.55 8.09 -2.39 -0.02 -9.57 16 33 H 0.13 -7.72 8.14 -2.39 -0.02 -7.73 16 34 H 0.11 -6.62 5.14 -2.39 -0.01 -6.64 16 35 H 0.12 -7.47 8.11 -2.39 -0.02 -7.49 16 36 H 0.13 -8.17 8.11 -2.39 -0.02 -8.19 16 37 H 0.12 -7.79 8.14 -2.39 -0.02 -7.81 16 38 H 0.12 -7.58 8.14 -2.38 -0.02 -7.60 16 39 H 0.11 -5.35 8.08 -2.39 -0.02 -5.37 16 40 H 0.08 -3.00 8.14 -2.39 -0.02 -3.02 16 41 H 0.15 -1.84 6.90 -2.91 -0.02 -1.86 16 42 H 0.13 -2.19 7.96 -2.39 -0.02 -2.21 16 43 H 0.39 -7.60 8.38 -74.06 -0.62 -8.22 16 44 H -0.29 2.05 7.11 99.48 0.71 2.75 16 45 H -0.30 1.67 7.11 99.48 0.71 2.38 16 Total: 1.00 -86.48 354.73 1.65 -84.82 By element: Atomic # 1 Polarization: -155.90 SS G_CDS: -1.04 Total: -156.94 kcal Atomic # 6 Polarization: 15.96 SS G_CDS: 6.75 Total: 22.71 kcal Atomic # 7 Polarization: 52.38 SS G_CDS: -4.64 Total: 47.74 kcal Atomic # 8 Polarization: 11.13 SS G_CDS: -1.55 Total: 9.58 kcal Atomic # 14 Polarization: -10.05 SS G_CDS: 2.14 Total: -7.91 kcal Total: -86.48 1.65 -84.82 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13287730.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 201.184 kcal (2) G-P(sol) polarization free energy of solvation -86.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.706 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.655 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -84.823 kcal (6) G-S(sol) free energy of system = (1) + (5) 116.361 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds