Wall clock time and date at job start Sun Mar 7 2021 06:25:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 H 1.00899 * 109.46920 * 2 1 4 4 C 1.46900 * 109.47002 * 119.99497 * 2 1 3 5 5 C 1.46891 * 109.47291 * 239.99291 * 2 1 3 6 6 C 1.53005 * 109.46866 * 65.00222 * 5 2 1 7 7 H 1.09000 * 112.85133 * 43.80361 * 6 5 2 8 8 C 1.53787 * 113.61178 * 175.00030 * 6 5 2 9 9 C 1.53784 * 87.07923 * 140.06478 * 8 6 5 10 10 H 1.09002 * 113.61478 * 89.11632 * 9 8 6 11 11 N 1.46497 * 113.61569 * 220.01663 * 9 8 6 12 12 C 1.34769 * 120.00274 * 204.99925 * 11 9 8 13 13 O 1.21550 * 119.99913 * 0.02562 * 12 11 9 14 14 C 1.47847 * 120.00054 * 180.02562 * 12 11 9 15 15 C 1.39515 * 120.55693 * 359.71644 * 14 12 11 16 16 N 1.31698 * 120.56394 * 179.73060 * 15 14 12 17 17 C 1.31927 * 121.88082 * 0.58690 * 16 15 14 18 18 C 1.38352 * 121.07705 * 359.68142 * 17 16 15 19 19 C 1.50696 * 120.35076 * 180.02562 * 18 17 16 20 20 O 1.42894 * 109.47478 * 119.97384 * 19 18 17 21 21 Si 1.86306 * 109.46879 * 359.97438 * 19 18 17 22 22 C 1.38357 * 119.30639 * 0.02562 * 18 17 16 23 23 C 1.53779 * 87.08045 * 334.56667 * 9 8 6 24 24 H 1.08995 * 109.46861 * 60.00399 * 1 2 3 25 25 H 1.08992 * 109.46947 * 180.02562 * 1 2 3 26 26 H 1.09001 * 109.46911 * 300.00426 * 1 2 3 27 27 H 1.09001 * 109.47119 * 180.02562 * 4 2 1 28 28 H 1.09001 * 109.47350 * 299.99808 * 4 2 1 29 29 H 1.09002 * 109.47603 * 59.99992 * 4 2 1 30 30 H 1.08995 * 109.47633 * 305.00449 * 5 2 1 31 31 H 1.09006 * 109.47627 * 184.99903 * 5 2 1 32 32 H 1.09004 * 113.61202 * 254.61231 * 8 6 5 33 33 H 1.08994 * 113.61447 * 25.51662 * 8 6 5 34 34 H 0.97009 * 119.99534 * 24.99936 * 11 9 8 35 35 H 1.08002 * 119.71925 * 0.02873 * 15 14 12 36 36 H 1.07995 * 119.46158 * 179.69981 * 17 16 15 37 37 H 1.09003 * 109.47541 * 239.98139 * 19 18 17 38 38 H 0.96699 * 114.00653 * 300.00650 * 20 19 18 39 39 H 1.48502 * 109.99931 * 179.97438 * 21 19 18 40 40 H 1.48498 * 109.99695 * 301.31772 * 21 19 18 41 41 H 1.07995 * 120.85938 * 180.02562 * 22 18 17 42 42 H 1.09006 * 113.61307 * 270.88660 * 23 9 8 43 43 H 1.09007 * 113.61642 * 139.98417 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6924 1.1995 5 6 1.9587 -0.6926 -1.1993 6 6 1.5539 0.0975 -2.4454 7 1 1.7120 1.1705 -2.3362 8 6 2.1235 -0.4792 -3.7524 9 6 0.7631 -0.1595 -4.3941 10 1 0.7049 0.8432 -4.8177 11 7 0.2908 -1.1959 -5.3155 12 6 -0.5693 -0.8784 -6.3033 13 8 -0.9529 0.2680 -6.4299 14 6 -1.0463 -1.9245 -7.2328 15 6 -0.6090 -3.2429 -7.1017 16 7 -1.0379 -4.1758 -7.9263 17 6 -1.8793 -3.9066 -8.9061 18 6 -2.3554 -2.6231 -9.1061 19 6 -3.3165 -2.3340 -10.2302 20 8 -4.5358 -1.8171 -9.6935 21 14 -3.6674 -3.9058 -11.1669 22 6 -1.9399 -1.6076 -8.2633 23 6 0.1606 -0.2683 -2.9835 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 3.0486 -0.6920 1.1998 28 1 1.5953 -0.1785 2.0895 29 1 1.5953 -1.7201 1.1997 30 1 1.5241 -1.6911 -1.2452 31 1 3.0450 -0.7708 -1.1557 32 1 2.9480 0.1032 -4.1638 33 1 2.3419 -1.5457 -3.7003 34 1 0.5973 -2.1108 -5.2146 35 1 0.0835 -3.5015 -6.3143 36 1 -2.2019 -4.7011 -9.5626 37 1 -2.8764 -1.5996 -10.9049 38 1 -4.9833 -2.4190 -9.0831 39 1 -4.6147 -3.6343 -12.2779 40 1 -2.4030 -4.4703 -11.7033 41 1 -2.2960 -0.5968 -8.3962 42 1 -0.1576 -1.2774 -2.7212 43 1 -0.5998 0.4842 -2.7741 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_13287814.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:25:54 Heat of formation + Delta-G solvation = 102.156200 kcal Electronic energy + Delta-G solvation = -23312.846039 eV Core-core repulsion = 19865.038253 eV Total energy + Delta-G solvation = -3447.807786 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.165 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.29828 -41.85152 -40.55279 -39.02228 -37.99344 -35.01575 -33.80496 -32.99778 -30.11376 -29.48708 -27.34965 -26.73729 -26.47466 -25.37873 -23.95823 -23.40901 -21.73963 -21.02219 -19.24393 -19.07159 -18.35676 -17.97893 -17.85529 -17.67367 -17.30607 -16.58651 -16.54116 -16.22292 -15.97090 -15.81762 -15.13367 -14.79316 -14.49135 -14.41003 -14.27640 -13.91841 -13.57626 -13.55849 -13.50061 -13.38127 -13.28068 -13.07615 -12.85548 -12.77167 -12.35875 -12.23616 -11.79079 -11.54236 -11.42384 -11.14040 -10.67077 -10.62183 -10.36802 -10.09990 -5.09040 -0.62716 -0.07504 1.04916 1.16953 1.54740 1.59590 1.89917 1.97356 2.58534 2.90498 2.97848 3.06612 3.22303 3.34047 3.35372 3.38699 3.47394 3.60577 3.68779 3.70711 3.72412 3.80733 3.98009 4.06295 4.16391 4.21831 4.22707 4.34883 4.40419 4.41639 4.49011 4.68034 4.71006 4.74939 4.77360 4.78441 4.85372 4.89200 4.89966 4.94814 5.06811 5.13557 5.27419 5.48287 6.31616 6.60208 6.65606 7.00642 Molecular weight = 293.17amu Principal moments of inertia in cm(-1) A = 0.034025 B = 0.002882 C = 0.002833 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 822.723591 B = 9714.819448 C = 9880.230693 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 N -0.370 5.370 3 H 0.438 0.562 4 C -0.046 4.046 5 C 0.012 3.988 6 C -0.117 4.117 7 H 0.125 0.875 8 C -0.127 4.127 9 C 0.093 3.907 10 H 0.086 0.914 11 N -0.698 5.698 12 C 0.566 3.434 13 O -0.577 6.577 14 C -0.200 4.200 15 C 0.150 3.850 16 N -0.495 5.495 17 C 0.128 3.872 18 C -0.177 4.177 19 C -0.070 4.070 20 O -0.554 6.554 21 Si 0.778 3.222 22 C -0.005 4.005 23 C -0.152 4.152 24 H 0.115 0.885 25 H 0.123 0.877 26 H 0.125 0.875 27 H 0.127 0.873 28 H 0.123 0.877 29 H 0.120 0.880 30 H 0.141 0.859 31 H 0.150 0.850 32 H 0.078 0.922 33 H 0.117 0.883 34 H 0.418 0.582 35 H 0.201 0.799 36 H 0.178 0.822 37 H 0.110 0.890 38 H 0.397 0.603 39 H -0.301 1.301 40 H -0.277 1.277 41 H 0.133 0.867 42 H 0.114 0.886 43 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.506 1.430 32.009 34.395 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 N 0.053 4.947 3 H 0.275 0.725 4 C -0.188 4.188 5 C -0.110 4.110 6 C -0.136 4.136 7 H 0.143 0.857 8 C -0.166 4.166 9 C -0.011 4.011 10 H 0.104 0.896 11 N -0.349 5.349 12 C 0.353 3.647 13 O -0.457 6.457 14 C -0.205 4.205 15 C -0.009 4.009 16 N -0.203 5.203 17 C -0.027 4.027 18 C -0.179 4.179 19 C -0.180 4.180 20 O -0.362 6.362 21 Si 0.684 3.316 22 C -0.031 4.031 23 C -0.190 4.190 24 H 0.133 0.867 25 H 0.141 0.859 26 H 0.144 0.856 27 H 0.145 0.855 28 H 0.141 0.859 29 H 0.138 0.862 30 H 0.159 0.841 31 H 0.167 0.833 32 H 0.097 0.903 33 H 0.135 0.865 34 H 0.257 0.743 35 H 0.217 0.783 36 H 0.195 0.805 37 H 0.128 0.872 38 H 0.247 0.753 39 H -0.229 1.229 40 H -0.204 1.204 41 H 0.151 0.849 42 H 0.132 0.868 43 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 12.663 1.209 30.940 33.453 hybrid contribution -0.076 1.684 -0.859 1.892 sum 12.587 2.893 30.081 32.737 Atomic orbital electron populations 1.24275 0.76775 1.09650 1.09298 1.44837 1.15540 1.19568 1.14720 0.72506 1.24124 1.05782 1.02355 0.86519 1.23903 1.06147 0.99344 0.81625 1.22694 0.95870 1.02068 0.92961 0.85678 1.23354 0.95293 1.04005 0.93960 1.22787 0.97075 0.92262 0.88994 0.89587 1.45740 1.45422 1.13651 1.30125 1.18140 0.78907 0.86888 0.80752 1.90819 1.58867 1.22359 1.73632 1.21083 1.03262 0.96272 0.99874 1.23533 0.94838 0.86437 0.96097 1.67803 1.11430 1.36480 1.04559 1.23160 0.91000 0.94806 0.93732 1.21391 1.01746 0.94796 0.99973 1.25116 0.85125 1.10287 0.97509 1.86516 1.35134 1.48129 1.66386 0.93865 0.79329 0.77623 0.80828 1.21641 0.90876 0.99952 0.90678 1.23875 0.97015 1.04342 0.93784 0.86699 0.85871 0.85647 0.85484 0.85887 0.86156 0.84057 0.83253 0.90346 0.86477 0.74330 0.78279 0.80542 0.87226 0.75265 1.22909 1.20364 0.84880 0.86787 0.90403 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.59 8.57 127.69 1.09 4.68 16 2 N -0.37 24.70 0.66 -948.87 -0.62 24.07 16 3 H 0.44 -30.63 8.40 -89.69 -0.75 -31.38 16 4 C -0.05 2.98 9.19 127.69 1.17 4.16 16 5 C 0.01 -0.74 4.57 86.31 0.39 -0.35 16 6 C -0.12 6.30 3.30 -10.26 -0.03 6.27 16 7 H 0.13 -6.89 8.09 -2.39 -0.02 -6.91 16 8 C -0.13 5.77 7.39 31.12 0.23 6.00 16 9 C 0.09 -3.34 4.24 45.52 0.19 -3.15 16 10 H 0.09 -2.39 7.47 -2.39 -0.02 -2.41 16 11 N -0.70 21.67 5.31 -442.92 -2.35 19.32 16 12 C 0.57 -10.91 7.78 86.79 0.68 -10.23 16 13 O -0.58 5.37 16.02 -3.87 -0.06 5.31 16 14 C -0.20 3.71 5.89 -19.99 -0.12 3.59 16 15 C 0.15 -3.38 10.71 85.02 0.91 -2.46 16 16 N -0.50 8.58 10.35 -194.76 -2.01 6.57 16 17 C 0.13 -2.22 9.84 84.71 0.83 -1.39 16 18 C -0.18 2.81 5.39 -19.81 -0.11 2.70 16 19 C -0.07 1.06 2.83 71.23 0.20 1.26 16 20 O -0.55 7.62 12.78 -148.98 -1.90 5.72 16 21 Si 0.78 -12.78 29.82 68.60 2.05 -10.73 16 22 C 0.00 0.07 9.31 22.73 0.21 0.28 16 23 C -0.15 7.01 5.69 31.12 0.18 7.18 16 24 H 0.11 -6.81 5.13 -2.39 -0.01 -6.83 16 25 H 0.12 -7.64 8.11 -2.39 -0.02 -7.66 16 26 H 0.13 -7.78 8.14 -2.39 -0.02 -7.80 16 27 H 0.13 -8.23 8.11 -2.39 -0.02 -8.25 16 28 H 0.12 -7.83 8.14 -2.39 -0.02 -7.85 16 29 H 0.12 -7.68 8.14 -2.39 -0.02 -7.70 16 30 H 0.14 -9.08 7.79 -2.39 -0.02 -9.09 16 31 H 0.15 -9.70 8.09 -2.38 -0.02 -9.71 16 32 H 0.08 -3.23 8.14 -2.39 -0.02 -3.25 16 33 H 0.12 -5.69 8.08 -2.39 -0.02 -5.70 16 34 H 0.42 -15.81 6.79 -92.70 -0.63 -16.44 16 35 H 0.20 -6.52 6.42 -2.91 -0.02 -6.54 16 36 H 0.18 -3.69 4.88 -2.91 -0.01 -3.70 16 37 H 0.11 -1.47 7.96 -2.39 -0.02 -1.48 16 38 H 0.40 -8.90 8.70 -74.06 -0.64 -9.54 16 39 H -0.30 2.17 7.11 99.48 0.71 2.88 16 40 H -0.28 3.42 7.11 99.48 0.71 4.13 16 41 H 0.13 -1.41 7.74 -2.91 -0.02 -1.43 16 42 H 0.11 -5.60 7.90 -2.38 -0.02 -5.62 16 43 H 0.08 -3.37 7.19 -2.38 -0.02 -3.39 16 Total: 1.00 -86.86 343.30 -0.02 -86.88 By element: Atomic # 1 Polarization: -154.73 SS G_CDS: -0.95 Total: -155.68 kcal Atomic # 6 Polarization: 12.71 SS G_CDS: 5.84 Total: 18.55 kcal Atomic # 7 Polarization: 54.95 SS G_CDS: -4.99 Total: 49.96 kcal Atomic # 8 Polarization: 12.99 SS G_CDS: -1.97 Total: 11.02 kcal Atomic # 14 Polarization: -12.78 SS G_CDS: 2.05 Total: -10.73 kcal Total: -86.86 -0.02 -86.88 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13287814.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 189.035 kcal (2) G-P(sol) polarization free energy of solvation -86.860 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 102.176 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.020 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -86.879 kcal (6) G-S(sol) free energy of system = (1) + (5) 102.156 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds