Wall clock time and date at job start Sun Mar 7 2021 06:26:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 H 1.00902 * 109.46688 * 2 1 4 4 C 1.46892 * 109.47593 * 120.00594 * 2 1 3 5 5 C 1.46903 * 109.46976 * 240.00386 * 2 1 3 6 6 C 1.52999 * 109.47380 * 174.99372 * 5 2 1 7 7 H 1.09005 * 112.90684 * 316.25534 * 6 5 2 8 8 C 1.53953 * 113.66084 * 87.43799 * 6 5 2 9 9 C 1.53784 * 87.01417 * 139.93748 * 8 6 5 10 10 H 1.08998 * 113.61302 * 89.23081 * 9 8 6 11 11 N 1.46504 * 113.61512 * 220.04553 * 9 8 6 12 12 C 1.34772 * 120.00352 * 254.13891 * 11 9 8 13 13 O 1.21596 * 119.99923 * 359.97438 * 12 11 9 14 14 C 1.47561 * 119.99912 * 179.97438 * 12 11 9 15 15 C 1.39835 * 119.99970 * 179.97438 * 14 12 11 16 16 C 1.36557 * 120.00016 * 180.02562 * 15 14 12 17 17 C 1.39830 * 119.99912 * 359.97438 * 16 15 14 18 18 C 1.47564 * 119.99574 * 179.97438 * 17 16 15 19 19 C 1.34977 * 125.27234 * 180.02562 * 18 17 16 20 20 C 1.37795 * 114.70274 * 180.02562 * 19 18 17 21 21 C 1.33744 * 115.08094 * 359.97438 * 20 19 18 22 22 C 1.50701 * 125.12155 * 179.73411 * 21 20 19 23 23 O 1.42898 * 109.47054 * 300.00333 * 22 21 20 24 24 Si 1.86301 * 109.47155 * 180.02562 * 22 21 20 25 25 S 1.75867 * 109.75940 * 0.02562 * 21 20 19 26 26 C 1.39823 * 120.00097 * 0.27655 * 17 16 15 27 27 C 1.36563 * 119.99873 * 359.48608 * 26 17 16 28 28 C 1.53774 * 87.17497 * 334.63745 * 9 8 6 29 29 H 1.09006 * 109.46952 * 179.97438 * 1 2 3 30 30 H 1.09004 * 109.46996 * 299.99323 * 1 2 3 31 31 H 1.08992 * 109.47662 * 59.99611 * 1 2 3 32 32 H 1.08997 * 109.47259 * 59.99596 * 4 2 1 33 33 H 1.08998 * 109.47385 * 180.02562 * 4 2 1 34 34 H 1.09004 * 109.47017 * 300.00070 * 4 2 1 35 35 H 1.09008 * 109.46700 * 54.99883 * 5 2 1 36 36 H 1.08992 * 109.47132 * 294.99988 * 5 2 1 37 37 H 1.08998 * 113.61528 * 25.42184 * 8 6 5 38 38 H 1.08997 * 113.67084 * 254.46266 * 8 6 5 39 39 H 0.97004 * 119.99615 * 74.13467 * 11 9 8 40 40 H 1.08003 * 120.00092 * 0.04479 * 15 14 12 41 41 H 1.08002 * 120.00528 * 180.02562 * 16 15 14 42 42 H 1.08005 * 122.65361 * 0.02562 * 19 18 17 43 43 H 1.08002 * 122.46205 * 180.02562 * 20 19 18 44 44 H 1.08997 * 109.46806 * 60.00857 * 22 21 20 45 45 H 0.96700 * 114.00248 * 299.99429 * 23 22 21 46 46 H 1.48502 * 109.99981 * 58.67920 * 24 22 21 47 47 H 1.48498 * 110.00242 * 180.02562 * 24 22 21 48 48 H 1.07997 * 119.99635 * 179.74488 * 26 17 16 49 49 H 1.08006 * 119.99412 * 180.27332 * 27 26 17 50 50 H 1.08998 * 113.61388 * 139.93851 * 28 9 8 51 51 H 1.08993 * 113.61818 * 270.84419 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9588 -0.6926 1.1993 5 6 1.9587 -0.6924 -1.1995 6 6 3.4835 -0.5844 -1.2641 7 1 3.8484 0.4152 -1.0279 8 6 4.2151 -1.7025 -0.4995 9 6 5.2159 -1.7355 -1.6666 10 1 6.0551 -1.0512 -1.5416 11 7 5.6358 -3.0881 -2.0416 12 6 6.8674 -3.5266 -1.7139 13 8 7.6302 -2.7994 -1.1074 14 6 7.2900 -4.8891 -2.0912 15 6 8.5680 -5.3439 -1.7517 16 6 8.9593 -6.6046 -2.1013 17 6 8.0818 -7.4410 -2.7983 18 6 8.5050 -8.8031 -3.1765 19 6 7.7478 -9.6963 -3.8479 20 6 8.3609 -10.9070 -4.0864 21 6 9.6093 -11.0123 -3.6182 22 6 10.4837 -12.2329 -3.7473 23 8 9.8521 -13.3414 -3.1037 24 14 12.1314 -11.9045 -2.9423 25 16 10.0739 -9.5146 -2.8220 26 6 6.8058 -6.9844 -3.1423 27 6 6.4128 -5.7253 -2.7885 28 6 4.0889 -1.1735 -2.5491 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5137 0.8901 31 1 -0.3634 0.5138 -0.8899 32 1 1.5954 -1.7202 1.1992 33 1 3.0488 -0.6921 1.1995 34 1 1.5955 -0.1788 2.0893 35 1 1.5239 -0.2328 -2.0872 36 1 1.6703 -1.7426 -1.1559 37 1 3.6310 -2.6173 -0.3993 38 1 4.6537 -1.3738 0.4426 39 1 5.0273 -3.6681 -2.5257 40 1 9.2455 -4.6981 -1.2127 41 1 9.9462 -6.9561 -1.8387 42 1 6.7408 -9.4793 -4.1725 43 1 7.8698 -11.7117 -4.6135 44 1 10.6337 -12.4624 -4.8022 45 1 9.6874 -13.2070 -2.1603 46 1 11.9376 -11.5593 -1.5110 47 1 13.0032 -13.1005 -3.0633 48 1 6.1297 -7.6290 -3.6843 49 1 5.4255 -5.3743 -3.0505 50 1 4.4258 -0.4183 -3.2591 51 1 3.4703 -1.9433 -3.0102 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_13308390.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:02 Heat of formation + Delta-G solvation = 127.221582 kcal Electronic energy + Delta-G solvation = -30053.388148 eV Core-core repulsion = 25937.265636 eV Total energy + Delta-G solvation = -4116.122512 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.158 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.24466 -41.36716 -40.12598 -39.28911 -38.78270 -37.50926 -34.95210 -33.43206 -32.27385 -30.68563 -29.94651 -29.48401 -27.38001 -26.69291 -25.85575 -24.87364 -24.09795 -23.69223 -23.08011 -21.67660 -21.05179 -20.31509 -19.19498 -19.08121 -18.61014 -18.08099 -17.71383 -17.43644 -16.92408 -16.65203 -16.37220 -16.21787 -16.19765 -16.04067 -15.92095 -15.49761 -15.07969 -14.63642 -14.56048 -14.38997 -14.34914 -13.90378 -13.83578 -13.67217 -13.56905 -13.51738 -13.41106 -13.33320 -13.27204 -13.12488 -13.05669 -12.82465 -12.57910 -12.46858 -12.32092 -12.11737 -11.78086 -11.55170 -11.49034 -11.11602 -10.91220 -10.68862 -10.21730 -10.11337 -9.58967 -9.05842 -5.13258 -0.91744 0.22018 0.31233 0.36386 0.73333 1.04968 1.16759 1.47284 1.52967 1.81706 1.92607 2.06626 2.79835 2.90824 2.98424 3.22042 3.27111 3.34997 3.39920 3.48124 3.62204 3.67422 3.71531 3.74229 3.81070 3.82250 3.98958 4.17045 4.17177 4.22423 4.29297 4.35038 4.38094 4.41657 4.48097 4.48805 4.53557 4.59713 4.68994 4.71955 4.76765 4.78310 4.85675 4.88892 4.89821 4.95582 4.98656 5.07549 5.07812 5.16771 5.19531 5.27403 5.29913 5.46197 5.51575 5.71216 6.33753 6.42322 7.11068 Molecular weight = 374.16amu Principal moments of inertia in cm(-1) A = 0.022633 B = 0.001467 C = 0.001425 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1236.840770 B =19084.076628 C =19637.549437 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.370 5.370 3 H 0.438 0.562 4 C -0.057 4.057 5 C 0.012 3.988 6 C -0.116 4.116 7 H 0.125 0.875 8 C -0.153 4.153 9 C 0.093 3.907 10 H 0.084 0.916 11 N -0.700 5.700 12 C 0.559 3.441 13 O -0.583 6.583 14 C -0.154 4.154 15 C -0.067 4.067 16 C -0.133 4.133 17 C 0.006 3.994 18 C -0.160 4.160 19 C -0.115 4.115 20 C -0.111 4.111 21 C -0.219 4.219 22 C -0.033 4.033 23 O -0.539 6.539 24 Si 0.706 3.294 25 S 0.117 5.883 26 C -0.111 4.111 27 C -0.062 4.062 28 C -0.126 4.126 29 H 0.120 0.880 30 H 0.123 0.877 31 H 0.128 0.872 32 H 0.122 0.878 33 H 0.114 0.886 34 H 0.125 0.875 35 H 0.151 0.849 36 H 0.141 0.859 37 H 0.112 0.888 38 H 0.075 0.925 39 H 0.417 0.583 40 H 0.125 0.875 41 H 0.127 0.873 42 H 0.170 0.830 43 H 0.153 0.847 44 H 0.139 0.861 45 H 0.388 0.612 46 H -0.265 1.265 47 H -0.276 1.276 48 H 0.160 0.840 49 H 0.172 0.828 50 H 0.079 0.921 51 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -32.515 28.228 6.360 43.526 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.053 4.947 3 H 0.275 0.725 4 C -0.200 4.200 5 C -0.110 4.110 6 C -0.135 4.135 7 H 0.143 0.857 8 C -0.191 4.191 9 C -0.012 4.012 10 H 0.102 0.898 11 N -0.352 5.352 12 C 0.348 3.652 13 O -0.464 6.464 14 C -0.157 4.157 15 C -0.086 4.086 16 C -0.152 4.152 17 C 0.004 3.996 18 C -0.277 4.277 19 C -0.145 4.145 20 C -0.141 4.141 21 C -0.337 4.337 22 C -0.145 4.145 23 O -0.347 6.347 24 Si 0.609 3.391 25 S 0.384 5.616 26 C -0.130 4.130 27 C -0.081 4.081 28 C -0.165 4.165 29 H 0.138 0.862 30 H 0.141 0.859 31 H 0.146 0.854 32 H 0.141 0.859 33 H 0.132 0.868 34 H 0.144 0.856 35 H 0.168 0.832 36 H 0.159 0.841 37 H 0.130 0.870 38 H 0.094 0.906 39 H 0.256 0.744 40 H 0.143 0.857 41 H 0.145 0.855 42 H 0.188 0.812 43 H 0.171 0.829 44 H 0.156 0.844 45 H 0.237 0.763 46 H -0.191 1.191 47 H -0.202 1.202 48 H 0.178 0.822 49 H 0.190 0.810 50 H 0.097 0.903 51 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -30.149 28.486 7.561 42.161 hybrid contribution -1.016 -1.258 -0.025 1.618 sum -31.165 27.227 7.536 42.064 Atomic orbital electron populations 1.24130 0.75376 1.09542 1.09744 1.44841 1.16034 1.19299 1.14502 0.72498 1.24265 1.05530 1.02715 0.87457 1.23902 0.94682 1.03731 0.88660 1.22719 0.92869 1.00653 0.97274 0.85708 1.23899 0.97430 1.00114 0.97682 1.22755 0.96811 0.83141 0.98457 0.89801 1.45753 1.14404 1.16667 1.58411 1.18389 0.82327 0.86381 0.78151 1.90804 1.54456 1.58320 1.42816 1.20092 0.96142 0.94859 1.04625 1.20948 0.95695 0.95215 0.96783 1.21034 1.00088 0.94189 0.99889 1.18482 0.94928 0.89943 0.96259 1.23227 0.98182 0.98183 1.08127 1.20625 1.02250 0.92118 0.99505 1.20217 0.93907 0.98810 1.01164 1.25065 1.00745 0.99863 1.08000 1.24414 1.02307 0.83581 1.04224 1.86611 1.80583 1.39380 1.28145 0.94531 0.76357 0.86821 0.81372 1.84301 1.14903 1.06730 1.55628 1.21240 0.94711 0.96903 1.00161 1.21267 0.99847 0.92580 0.94369 1.23328 0.95441 1.01292 0.96410 0.86184 0.85875 0.85392 0.85935 0.86765 0.85630 0.83157 0.84125 0.86975 0.90588 0.74381 0.85674 0.85544 0.81238 0.82924 0.84395 0.76283 1.19059 1.20156 0.82207 0.81036 0.90268 0.86517 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.99 9.19 127.69 1.17 4.16 16 2 N -0.37 24.60 0.66 -948.85 -0.62 23.97 16 3 H 0.44 -30.52 8.41 -89.69 -0.75 -31.27 16 4 C -0.06 3.54 8.57 127.69 1.09 4.64 16 5 C 0.01 -0.76 4.57 86.30 0.39 -0.37 16 6 C -0.12 6.20 3.31 -10.21 -0.03 6.17 16 7 H 0.12 -6.81 8.10 -2.38 -0.02 -6.83 16 8 C -0.15 6.91 5.70 31.18 0.18 7.08 16 9 C 0.09 -3.25 4.21 45.52 0.19 -3.06 16 10 H 0.08 -2.25 7.50 -2.39 -0.02 -2.27 16 11 N -0.70 21.06 5.31 -443.17 -2.35 18.70 16 12 C 0.56 -10.14 7.76 86.70 0.67 -9.47 16 13 O -0.58 4.78 15.95 -4.02 -0.06 4.71 16 14 C -0.15 2.75 5.88 -20.05 -0.12 2.64 16 15 C -0.07 0.87 9.53 22.26 0.21 1.09 16 16 C -0.13 1.75 9.54 22.26 0.21 1.96 16 17 C 0.01 -0.09 5.88 -20.05 -0.12 -0.21 16 18 C -0.16 2.18 6.37 23.98 0.15 2.33 16 19 C -0.11 1.80 9.64 21.41 0.21 2.00 16 20 C -0.11 1.48 10.00 21.14 0.21 1.69 16 21 C -0.22 2.62 5.73 24.66 0.14 2.76 16 22 C -0.03 0.38 2.96 71.24 0.21 0.59 16 23 O -0.54 4.74 12.86 -148.98 -1.92 2.83 16 24 Si 0.71 -7.54 30.96 68.60 2.12 -5.41 16 25 S 0.12 -1.40 19.46 -56.49 -1.10 -2.50 16 26 C -0.11 2.36 9.48 22.26 0.21 2.57 16 27 C -0.06 1.52 9.48 22.26 0.21 1.74 16 28 C -0.13 5.65 7.39 31.12 0.23 5.88 16 29 H 0.12 -7.65 8.14 -2.38 -0.02 -7.66 16 30 H 0.12 -7.83 8.14 -2.38 -0.02 -7.85 16 31 H 0.13 -8.30 8.11 -2.39 -0.02 -8.32 16 32 H 0.12 -7.54 8.11 -2.39 -0.02 -7.56 16 33 H 0.11 -6.70 5.13 -2.39 -0.01 -6.71 16 34 H 0.13 -7.74 8.14 -2.38 -0.02 -7.76 16 35 H 0.15 -9.75 8.09 -2.38 -0.02 -9.77 16 36 H 0.14 -8.98 7.80 -2.39 -0.02 -9.00 16 37 H 0.11 -5.38 7.90 -2.39 -0.02 -5.40 16 38 H 0.08 -3.20 7.19 -2.39 -0.02 -3.22 16 39 H 0.42 -15.42 6.72 -92.71 -0.62 -16.04 16 40 H 0.13 -1.35 7.64 -2.91 -0.02 -1.37 16 41 H 0.13 -1.68 7.26 -2.91 -0.02 -1.70 16 42 H 0.17 -3.68 6.88 -2.91 -0.02 -3.70 16 43 H 0.15 -2.27 8.06 -2.91 -0.02 -2.29 16 44 H 0.14 -1.88 7.96 -2.39 -0.02 -1.90 16 45 H 0.39 -5.48 8.70 -74.06 -0.64 -6.13 16 46 H -0.27 1.82 7.11 99.48 0.71 2.53 16 47 H -0.28 1.00 7.11 99.48 0.71 1.71 16 48 H 0.16 -4.26 6.74 -2.91 -0.02 -4.28 16 49 H 0.17 -5.92 6.38 -2.91 -0.02 -5.94 16 50 H 0.08 -3.25 8.14 -2.39 -0.02 -3.27 16 51 H 0.12 -5.63 8.07 -2.39 -0.02 -5.65 16 Total: 1.00 -85.62 417.92 0.49 -85.13 By element: Atomic # 1 Polarization: -160.62 SS G_CDS: -1.01 Total: -161.63 kcal Atomic # 6 Polarization: 28.76 SS G_CDS: 5.44 Total: 34.20 kcal Atomic # 7 Polarization: 45.65 SS G_CDS: -2.98 Total: 42.68 kcal Atomic # 8 Polarization: 9.52 SS G_CDS: -1.98 Total: 7.54 kcal Atomic # 14 Polarization: -7.54 SS G_CDS: 2.12 Total: -5.41 kcal Atomic # 16 Polarization: -1.40 SS G_CDS: -1.10 Total: -2.50 kcal Total: -85.62 0.49 -85.13 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13308390.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 212.348 kcal (2) G-P(sol) polarization free energy of solvation -85.619 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 126.729 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.492 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -85.127 kcal (6) G-S(sol) free energy of system = (1) + (5) 127.222 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds