Wall clock time and date at job start Sun Mar 7 2021 06:26:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 H 1.00901 * 109.47215 * 2 1 4 4 C 1.46902 * 109.46688 * 240.00130 * 2 1 3 5 5 C 1.46901 * 109.47230 * 120.00743 * 2 1 3 6 6 C 1.52998 * 109.46683 * 184.99843 * 5 2 1 7 7 H 1.08996 * 112.85127 * 316.18661 * 6 5 2 8 8 C 1.53777 * 113.61659 * 87.50342 * 6 5 2 9 9 C 1.53783 * 87.08459 * 139.97769 * 8 6 5 10 10 H 1.08993 * 113.61820 * 89.11156 * 9 8 6 11 11 N 1.46498 * 113.69244 * 220.00714 * 9 8 6 12 12 C 1.34770 * 120.00295 * 252.53291 * 11 9 8 13 13 O 1.21596 * 119.99950 * 359.97438 * 12 11 9 14 14 C 1.47539 * 120.00113 * 179.97438 * 12 11 9 15 15 C 1.40145 * 120.19090 * 180.02562 * 14 12 11 16 16 O 1.35652 * 120.14617 * 0.02562 * 15 14 12 17 17 C 1.38705 * 119.69909 * 180.02562 * 15 14 12 18 18 C 1.38055 * 120.08343 * 0.02562 * 17 15 14 19 19 C 1.50699 * 119.80315 * 180.02562 * 18 17 15 20 20 O 1.42904 * 109.47531 * 64.99361 * 19 18 17 21 21 Si 1.86303 * 109.47313 * 184.99766 * 19 18 17 22 22 C 1.38551 * 120.39151 * 0.02562 * 18 17 15 23 23 C 1.37785 * 120.29854 * 359.67619 * 22 18 17 24 24 C 1.53785 * 87.07877 * 334.56441 * 9 8 6 25 25 H 1.09002 * 109.47742 * 179.97438 * 1 2 3 26 26 H 1.09004 * 109.46736 * 299.99613 * 1 2 3 27 27 H 1.09000 * 109.47357 * 59.99578 * 1 2 3 28 28 H 1.08992 * 109.47412 * 300.00019 * 4 2 1 29 29 H 1.09004 * 109.46739 * 60.00523 * 4 2 1 30 30 H 1.09001 * 109.47165 * 179.97438 * 4 2 1 31 31 H 1.08995 * 109.46814 * 304.99109 * 5 2 1 32 32 H 1.08993 * 109.46905 * 64.99501 * 5 2 1 33 33 H 1.08998 * 113.61388 * 254.52083 * 8 6 5 34 34 H 1.08995 * 113.61861 * 25.42728 * 8 6 5 35 35 H 0.97009 * 119.99353 * 72.53226 * 11 9 8 36 36 H 0.96698 * 113.99918 * 90.00421 * 16 15 14 37 37 H 1.08004 * 119.95732 * 180.02562 * 17 15 14 38 38 H 1.09003 * 109.47364 * 304.99478 * 19 18 17 39 39 H 0.96696 * 114.00498 * 179.97438 * 20 19 18 40 40 H 1.48498 * 109.99474 * 299.99841 * 21 19 18 41 41 H 1.48498 * 109.99834 * 61.31621 * 21 19 18 42 42 H 1.08000 * 119.84716 * 179.97438 * 22 18 17 43 43 H 1.07997 * 120.04749 * 180.31802 * 23 22 18 44 44 H 1.08997 * 113.61903 * 270.88246 * 24 9 8 45 45 H 1.09001 * 113.69063 * 139.99086 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9585 -0.6925 -1.1995 5 6 1.9587 -0.6926 1.1993 6 6 3.4835 -0.5847 1.2637 7 1 3.9615 -0.7640 0.3007 8 6 3.9817 0.6849 1.9740 9 6 5.0668 -0.1952 2.6166 10 1 5.9786 -0.2669 2.0237 11 7 5.3263 0.1228 4.0229 12 6 6.4665 0.7503 4.3727 13 8 7.2803 1.0521 3.5210 14 6 6.7275 1.0711 5.7889 15 6 7.9117 1.7240 6.1570 16 8 8.8237 2.0648 5.2124 17 6 8.1469 2.0202 7.4915 18 6 7.2180 1.6723 8.4517 19 6 7.4797 1.9976 9.8997 20 8 7.5087 3.4160 10.0716 21 14 6.1258 1.2719 10.9538 22 6 6.0465 1.0258 8.0919 23 6 5.7938 0.7293 6.7703 24 6 4.1092 -1.3824 2.4200 25 1 -0.3634 -1.0276 -0.0005 26 1 -0.3633 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 1.5952 -1.7201 -1.1995 29 1 1.5952 -0.1785 -2.0894 30 1 3.0485 -0.6921 -1.1998 31 1 1.5242 -0.2331 2.0871 32 1 1.6702 -1.7428 1.1556 33 1 4.3776 1.4390 1.2938 34 1 3.2690 1.0925 2.6909 35 1 4.6772 -0.1183 4.7024 36 1 8.6894 2.9450 4.8354 37 1 9.0579 2.5236 7.7798 38 1 8.4390 1.5757 10.1993 39 1 7.6726 3.6987 10.9816 40 1 4.8126 1.8392 10.5553 41 1 6.1060 -0.2059 10.8084 42 1 5.3261 0.7573 8.8504 43 1 4.8771 0.2299 6.4938 44 1 3.4313 -1.5401 3.2588 45 1 4.6066 -2.2979 2.1000 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_13422076.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:07 Heat of formation + Delta-G solvation = 82.416888 kcal Electronic energy + Delta-G solvation = -25381.859647 eV Core-core repulsion = 21679.939620 eV Total energy + Delta-G solvation = -3701.920027 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.169 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -44.51965 -42.64082 -41.60080 -40.17206 -39.04852 -37.94216 -35.94908 -33.77111 -32.15012 -31.93617 -31.92584 -28.79845 -28.54247 -27.90165 -25.84396 -24.73512 -24.01355 -22.78668 -22.49535 -21.70549 -20.39681 -20.01632 -19.69944 -19.51004 -19.17826 -18.64787 -18.10890 -17.74958 -17.38405 -17.24693 -16.95978 -16.60842 -16.34393 -16.27576 -16.04681 -15.98161 -15.80393 -15.73417 -15.64093 -15.29900 -15.09976 -14.90323 -14.77039 -14.73248 -14.12339 -14.06325 -13.71137 -13.54185 -13.27934 -13.19388 -12.78492 -12.55423 -11.74697 -11.33818 -11.15569 -10.84111 -10.60730 -5.66536 -1.50416 -1.24933 -0.70091 0.43204 0.49601 0.50963 0.68406 0.78751 0.91572 0.93259 1.18818 1.26857 1.35885 1.58810 1.65466 1.67544 1.71469 1.76324 1.86822 2.06345 2.12353 2.16512 2.20271 2.26923 2.31805 2.34991 2.46662 2.64068 2.78909 2.89222 2.92791 2.97689 3.02419 3.18288 3.24914 3.30597 3.36921 3.50524 3.61138 3.77891 3.90097 4.10390 4.20342 4.30117 4.44504 4.71970 5.29662 5.86801 5.91968 6.15189 Molecular weight = 308.17amu Principal moments of inertia in cm(-1) A = 0.021254 B = 0.002861 C = 0.002633 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1317.078906 B = 9785.383451 C =10633.449302 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.387 5.387 3 H 0.428 0.572 4 C -0.053 4.053 5 C 0.003 3.997 6 C -0.146 4.146 7 H 0.119 0.881 8 C -0.161 4.161 9 C 0.131 3.869 10 H 0.124 0.876 11 N -0.725 5.725 12 C 0.566 3.434 13 O -0.511 6.511 14 C -0.174 4.174 15 C 0.178 3.822 16 O -0.475 6.475 17 C -0.124 4.124 18 C -0.023 4.023 19 C -0.082 4.082 20 O -0.544 6.544 21 Si 0.691 3.309 22 C -0.142 4.142 23 C -0.064 4.064 24 C -0.133 4.133 25 H 0.122 0.878 26 H 0.123 0.877 27 H 0.125 0.875 28 H 0.123 0.877 29 H 0.125 0.875 30 H 0.124 0.876 31 H 0.131 0.869 32 H 0.132 0.868 33 H 0.086 0.914 34 H 0.096 0.904 35 H 0.401 0.599 36 H 0.400 0.600 37 H 0.145 0.855 38 H 0.082 0.918 39 H 0.388 0.612 40 H -0.250 1.250 41 H -0.253 1.253 42 H 0.129 0.871 43 H 0.131 0.869 44 H 0.098 0.902 45 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -21.142 -4.659 -17.939 28.116 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 N 0.037 4.963 3 H 0.262 0.738 4 C -0.194 4.194 5 C -0.119 4.119 6 C -0.165 4.165 7 H 0.137 0.863 8 C -0.199 4.199 9 C 0.026 3.974 10 H 0.142 0.858 11 N -0.378 5.378 12 C 0.354 3.646 13 O -0.386 6.386 14 C -0.178 4.178 15 C 0.132 3.868 16 O -0.286 6.286 17 C -0.143 4.143 18 C -0.023 4.023 19 C -0.193 4.193 20 O -0.351 6.351 21 Si 0.592 3.408 22 C -0.160 4.160 23 C -0.082 4.082 24 C -0.171 4.171 25 H 0.141 0.859 26 H 0.141 0.859 27 H 0.143 0.857 28 H 0.142 0.858 29 H 0.143 0.857 30 H 0.143 0.857 31 H 0.149 0.851 32 H 0.150 0.850 33 H 0.105 0.895 34 H 0.114 0.886 35 H 0.237 0.763 36 H 0.259 0.741 37 H 0.163 0.837 38 H 0.100 0.900 39 H 0.237 0.763 40 H -0.174 1.174 41 H -0.177 1.177 42 H 0.146 0.854 43 H 0.148 0.852 44 H 0.116 0.884 45 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -21.256 -5.732 -19.091 29.140 hybrid contribution -0.104 0.584 -0.172 0.617 sum -21.360 -5.148 -19.264 29.221 Atomic orbital electron populations 1.24146 0.75541 1.09656 1.09615 1.45030 1.16252 1.19077 1.15891 0.73758 1.24203 1.06048 1.02480 0.86716 1.24073 0.98046 1.02478 0.87303 1.23021 0.90715 1.00943 1.01866 0.86316 1.23810 0.99742 0.96226 1.00167 1.22290 0.98075 0.93751 0.83312 0.85774 1.45817 1.21938 1.61599 1.08416 1.18092 0.81030 0.77401 0.88086 1.90860 1.44979 1.51506 1.51235 1.20266 0.96566 1.07660 0.93309 1.18486 0.86388 0.93590 0.88376 1.84765 1.49776 1.39475 1.54628 1.21413 1.00874 1.00682 0.91316 1.19496 0.93352 0.95164 0.94312 1.24802 1.09890 0.87591 0.96969 1.86461 1.95663 1.18708 1.34311 0.94628 0.77499 0.79670 0.89037 1.20864 0.97149 1.01585 0.96363 1.20988 0.97764 0.97454 0.92028 1.23381 0.98255 0.98743 0.96770 0.85919 0.85876 0.85656 0.85842 0.85653 0.85739 0.85113 0.84968 0.89529 0.88596 0.76289 0.74144 0.83720 0.89980 0.76326 1.17414 1.17728 0.85353 0.85156 0.88397 0.88851 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.52 9.19 60.06 0.55 2.07 16 2 N -0.39 12.59 0.66 -251.27 -0.17 12.42 16 3 H 0.43 -14.39 8.44 -39.29 -0.33 -14.73 16 4 C -0.05 1.65 8.97 60.07 0.54 2.18 16 5 C 0.00 -0.08 4.48 -3.82 -0.02 -0.09 16 6 C -0.15 3.82 3.58 -89.81 -0.32 3.50 16 7 H 0.12 -3.20 6.10 -51.93 -0.32 -3.51 16 8 C -0.16 3.58 7.43 -25.92 -0.19 3.38 16 9 C 0.13 -2.32 4.24 -67.12 -0.28 -2.61 16 10 H 0.12 -1.85 7.46 -51.93 -0.39 -2.24 16 11 N -0.72 10.59 5.31 -54.06 -0.29 10.30 16 12 C 0.57 -5.23 7.76 -12.47 -0.10 -5.33 16 13 O -0.51 2.84 14.76 -16.60 -0.24 2.59 16 14 C -0.17 1.46 5.89 -104.84 -0.62 0.84 16 15 C 0.18 -1.16 6.72 -38.69 -0.26 -1.42 16 16 O -0.47 2.77 11.58 -40.54 -0.47 2.30 16 17 C -0.12 0.82 9.60 -39.48 -0.38 0.44 16 18 C -0.02 0.16 5.39 -104.57 -0.56 -0.40 16 19 C -0.08 0.71 2.78 36.00 0.10 0.81 16 20 O -0.54 4.42 12.81 -35.23 -0.45 3.96 16 21 Si 0.69 -6.64 29.83 -169.99 -5.07 -11.71 16 22 C -0.14 1.18 8.64 -39.63 -0.34 0.84 16 23 C -0.06 0.65 9.53 -39.20 -0.37 0.28 16 24 C -0.13 2.90 7.39 -25.91 -0.19 2.70 16 25 H 0.12 -3.84 8.14 -51.93 -0.42 -4.26 16 26 H 0.12 -3.87 8.11 -51.93 -0.42 -4.30 16 27 H 0.12 -3.94 8.14 -51.93 -0.42 -4.37 16 28 H 0.12 -3.82 8.11 -51.93 -0.42 -4.24 16 29 H 0.13 -3.91 8.14 -51.93 -0.42 -4.33 16 30 H 0.12 -3.81 6.10 -51.93 -0.32 -4.13 16 31 H 0.13 -3.99 7.79 -51.93 -0.40 -4.40 16 32 H 0.13 -4.03 8.09 -51.93 -0.42 -4.45 16 33 H 0.09 -1.83 8.14 -51.93 -0.42 -2.26 16 34 H 0.10 -2.19 7.90 -51.93 -0.41 -2.60 16 35 H 0.40 -6.83 6.76 -40.82 -0.28 -7.10 16 36 H 0.40 -3.82 9.06 45.56 0.41 -3.41 16 37 H 0.15 -1.02 8.06 -52.48 -0.42 -1.44 16 38 H 0.08 -0.80 7.96 -51.93 -0.41 -1.22 16 39 H 0.39 -4.91 8.74 45.56 0.40 -4.51 16 40 H -0.25 1.79 7.04 56.52 0.40 2.19 16 41 H -0.25 1.85 7.11 56.52 0.40 2.25 16 42 H 0.13 -1.17 4.83 -52.49 -0.25 -1.42 16 43 H 0.13 -1.87 6.40 -52.49 -0.34 -2.21 16 44 H 0.10 -2.21 8.08 -51.93 -0.42 -2.63 16 45 H 0.09 -1.91 8.14 -51.93 -0.42 -2.33 16 LS Contribution 359.40 15.07 5.42 5.42 Total: 1.00 -39.37 359.40 -9.78 -49.14 By element: Atomic # 1 Polarization: -75.58 SS G_CDS: -6.05 Total: -81.63 kcal Atomic # 6 Polarization: 9.65 SS G_CDS: -2.45 Total: 7.20 kcal Atomic # 7 Polarization: 23.17 SS G_CDS: -0.45 Total: 22.72 kcal Atomic # 8 Polarization: 10.02 SS G_CDS: -1.17 Total: 8.86 kcal Atomic # 14 Polarization: -6.64 SS G_CDS: -5.07 Total: -11.71 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -39.37 -9.78 -49.14 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13422076.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 131.559 kcal (2) G-P(sol) polarization free energy of solvation -39.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.192 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.775 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -49.142 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.417 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds