Wall clock time and date at job start Sun Mar 7 2021 06:26:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37782 * 119.84935 * 2 1 4 4 C 1.39709 * 119.90673 * 179.77331 * 3 2 1 5 5 C 1.47539 * 120.19027 * 180.25144 * 4 3 2 6 6 O 1.21593 * 119.99735 * 180.24723 * 5 4 3 7 7 N 1.34773 * 120.00382 * 0.25131 * 5 4 3 8 8 C 1.46497 * 120.00107 * 179.97438 * 7 5 4 9 9 H 1.08994 * 112.84931 * 25.33364 * 8 7 5 10 10 C 1.53787 * 113.61388 * 156.52725 * 8 7 5 11 11 C 1.53777 * 87.08090 * 139.98113 * 10 8 7 12 12 H 1.09001 * 113.61421 * 89.19858 * 11 10 8 13 13 C 1.53002 * 113.61344 * 220.01968 * 11 10 8 14 14 N 1.46899 * 109.46848 * 184.99966 * 13 11 10 15 15 H 1.00904 * 109.47613 * 304.99944 * 14 13 11 16 16 C 1.46900 * 109.47340 * 65.00034 * 14 13 11 17 17 C 1.46904 * 109.46917 * 184.99868 * 14 13 11 18 18 C 1.53780 * 113.61619 * 254.13271 * 8 7 5 19 19 C 1.40139 * 119.61531 * 0.49834 * 4 3 2 20 20 O 1.35660 * 120.14751 * 179.77296 * 19 4 3 21 21 C 1.38705 * 119.70284 * 359.75466 * 19 4 3 22 22 C 1.50690 * 119.96006 * 179.97438 * 21 19 4 23 23 O 1.42902 * 109.46990 * 285.02060 * 22 21 19 24 24 Si 1.86301 * 109.47281 * 165.01943 * 22 21 19 25 25 C 1.38057 * 120.07966 * 359.97438 * 21 19 4 26 26 H 1.09002 * 109.47152 * 269.72442 * 1 2 3 27 27 H 1.09001 * 109.46980 * 149.72543 * 1 2 3 28 28 H 1.09004 * 109.47113 * 29.72523 * 1 2 3 29 29 H 1.07996 * 120.04823 * 0.02562 * 3 2 1 30 30 H 0.97005 * 119.99376 * 359.97438 * 7 5 4 31 31 H 1.09002 * 113.61258 * 254.53348 * 10 8 7 32 32 H 1.09004 * 113.60857 * 25.43222 * 10 8 7 33 33 H 1.08995 * 109.46849 * 304.99958 * 13 11 10 34 34 H 1.09000 * 109.46930 * 65.00365 * 13 11 10 35 35 H 1.08997 * 109.46669 * 59.99709 * 16 14 13 36 36 H 1.08999 * 109.47211 * 179.97438 * 16 14 13 37 37 H 1.08992 * 109.47158 * 300.00128 * 16 14 13 38 38 H 1.09005 * 109.46658 * 60.00330 * 17 14 13 39 39 H 1.09002 * 109.47035 * 179.97438 * 17 14 13 40 40 H 1.08997 * 109.47349 * 300.00448 * 17 14 13 41 41 H 1.09002 * 113.61196 * 334.57323 * 18 8 7 42 42 H 1.09001 * 113.60969 * 105.46665 * 18 8 7 43 43 H 0.96697 * 113.99961 * 269.98194 * 20 19 4 44 44 H 1.08998 * 109.47629 * 45.01786 * 22 21 19 45 45 H 0.96699 * 113.99989 * 299.99873 * 23 22 21 46 46 H 1.48503 * 109.99639 * 58.68308 * 24 22 21 47 47 H 1.48497 * 110.00028 * 179.97438 * 24 22 21 48 48 H 1.07999 * 119.80269 * 179.97438 * 25 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1950 0.0000 4 6 3.5899 1.1964 0.0048 5 6 4.3305 2.4724 0.0104 6 8 5.5464 2.4696 0.0100 7 7 3.6594 3.6412 0.0161 8 6 4.3949 4.9082 0.0222 9 1 5.3925 4.8205 -0.4080 10 6 3.5864 6.0925 -0.5333 11 6 4.2021 6.9394 0.5929 12 1 5.1469 7.4091 0.3193 13 6 3.2155 7.9180 1.2332 14 7 3.9230 8.7590 2.2080 15 1 4.3983 8.1716 2.8767 16 6 4.9049 9.5987 1.5088 17 6 2.9566 9.6155 2.9083 18 6 4.3710 5.6278 1.3810 19 6 4.2837 -0.0212 -0.0010 20 8 5.6402 -0.0324 -0.0011 21 6 3.5771 -1.2148 -0.0063 22 6 4.3172 -2.5274 -0.0132 23 8 4.8544 -2.7645 -1.3160 24 14 3.1446 -3.9039 0.4350 25 6 2.1966 -1.2017 -0.0053 26 1 -0.3633 -0.0049 1.0277 27 1 -0.3633 -0.8875 -0.5181 28 1 -0.3633 0.8925 -0.5096 29 1 1.6511 2.1293 0.0004 30 1 2.6894 3.6434 0.0161 31 1 3.8956 6.4023 -1.5316 32 1 2.5075 5.9649 -0.4438 33 1 2.7761 8.5487 0.4604 34 1 2.4272 7.3604 1.7389 35 1 4.3914 10.2332 0.7865 36 1 5.4295 10.2230 2.2321 37 1 5.6218 8.9633 0.9892 38 1 2.2281 8.9923 3.4271 39 1 3.4815 10.2392 3.6319 40 1 2.4431 10.2500 2.1860 41 1 3.5071 5.3729 1.9949 42 1 5.3127 5.5629 1.9260 43 1 6.0335 -0.0317 -0.8845 44 1 5.1290 -2.4906 0.7133 45 1 4.1871 -2.8095 -2.0144 46 1 2.0164 -3.9442 -0.5298 47 1 3.8623 -5.2039 0.4312 48 1 1.6510 -2.1337 -0.0099 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_13422088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:12 Heat of formation + Delta-G solvation = 74.946364 kcal Electronic energy + Delta-G solvation = -27640.506705 eV Core-core repulsion = 23782.725112 eV Total energy + Delta-G solvation = -3857.781593 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.185 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -44.50314 -42.68469 -41.69449 -40.20379 -38.77311 -38.37590 -35.94452 -33.88711 -33.70111 -32.09967 -31.91453 -28.73187 -28.44352 -28.13988 -27.54627 -26.64011 -24.89547 -22.95213 -22.68861 -22.33040 -21.68472 -20.41709 -20.17082 -19.68968 -19.28798 -18.85213 -18.34695 -18.04432 -17.69074 -17.60211 -17.12392 -16.75217 -16.54455 -16.39182 -16.34666 -16.02664 -15.95888 -15.85541 -15.72225 -15.67232 -15.39033 -15.29961 -15.18152 -14.95948 -14.71730 -14.34572 -14.11170 -14.04766 -13.84296 -13.57811 -13.39528 -13.25089 -12.91945 -12.52789 -12.34379 -11.80129 -11.31492 -11.22611 -10.93041 -10.31925 -5.60376 -1.49173 -1.17540 -0.73590 0.44417 0.50873 0.60206 0.69707 0.82661 0.91766 0.94208 1.27915 1.35655 1.37681 1.59921 1.66616 1.69682 1.72483 1.77408 1.87991 2.07383 2.13472 2.18256 2.21292 2.27999 2.36070 2.41383 2.61603 2.63206 2.76248 2.85509 2.90866 2.92763 3.03497 3.20348 3.23434 3.29294 3.31578 3.47745 3.64154 3.76417 3.80236 3.82686 3.99024 4.10129 4.22339 4.23362 4.39200 4.52617 4.78234 5.32358 5.71893 6.00172 6.18295 Molecular weight = 322.19amu Principal moments of inertia in cm(-1) A = 0.023614 B = 0.002675 C = 0.002510 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1185.436994 B =10463.010778 C =11151.875273 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.096 4.096 3 C -0.068 4.068 4 C -0.173 4.173 5 C 0.565 3.435 6 O -0.511 6.511 7 N -0.725 5.725 8 C 0.132 3.868 9 H 0.123 0.877 10 C -0.132 4.132 11 C -0.147 4.147 12 H 0.118 0.882 13 C 0.003 3.997 14 N -0.387 5.387 15 H 0.428 0.572 16 C -0.053 4.053 17 C -0.048 4.048 18 C -0.161 4.161 19 C 0.194 3.806 20 O -0.472 6.472 21 C -0.146 4.146 22 C -0.071 4.071 23 O -0.526 6.526 24 Si 0.690 3.310 25 C -0.077 4.077 26 H 0.078 0.922 27 H 0.072 0.928 28 H 0.069 0.931 29 H 0.128 0.872 30 H 0.401 0.599 31 H 0.092 0.908 32 H 0.098 0.902 33 H 0.132 0.868 34 H 0.131 0.869 35 H 0.123 0.877 36 H 0.125 0.875 37 H 0.124 0.876 38 H 0.123 0.877 39 H 0.125 0.875 40 H 0.122 0.878 41 H 0.096 0.904 42 H 0.086 0.914 43 H 0.401 0.599 44 H 0.125 0.875 45 H 0.375 0.625 46 H -0.257 1.257 47 H -0.252 1.252 48 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.833 31.236 7.815 32.723 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.096 4.096 3 C -0.087 4.087 4 C -0.176 4.176 5 C 0.353 3.647 6 O -0.386 6.386 7 N -0.378 5.378 8 C 0.026 3.974 9 H 0.141 0.859 10 C -0.171 4.171 11 C -0.166 4.166 12 H 0.136 0.864 13 C -0.119 4.119 14 N 0.037 4.963 15 H 0.263 0.737 16 C -0.194 4.194 17 C -0.189 4.189 18 C -0.199 4.199 19 C 0.147 3.853 20 O -0.284 6.284 21 C -0.147 4.147 22 C -0.181 4.181 23 O -0.332 6.332 24 Si 0.591 3.409 25 C -0.094 4.094 26 H 0.097 0.903 27 H 0.091 0.909 28 H 0.088 0.912 29 H 0.146 0.854 30 H 0.237 0.763 31 H 0.111 0.889 32 H 0.116 0.884 33 H 0.150 0.850 34 H 0.149 0.851 35 H 0.141 0.859 36 H 0.143 0.857 37 H 0.143 0.857 38 H 0.141 0.859 39 H 0.143 0.857 40 H 0.141 0.859 41 H 0.114 0.886 42 H 0.105 0.895 43 H 0.260 0.740 44 H 0.142 0.858 45 H 0.222 0.778 46 H -0.183 1.183 47 H -0.176 1.176 48 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -4.926 30.637 8.298 32.121 hybrid contribution -0.210 0.166 -1.425 1.450 sum -5.136 30.803 6.873 31.976 Atomic orbital electron populations 1.20854 0.89875 1.03571 1.03179 1.19811 0.96851 0.92262 1.00672 1.21027 0.91940 0.98116 0.97608 1.20247 0.93887 0.93111 1.10404 1.18117 0.87293 0.83379 0.75906 1.90866 1.13026 1.87179 1.47511 1.45818 1.10040 1.04971 1.76965 1.22274 0.98067 0.81695 0.95338 0.85931 1.23367 1.01077 0.94057 0.98569 1.23054 0.99401 0.94351 0.99767 0.86371 1.24071 0.97817 0.95845 0.94161 1.45032 1.16858 1.16990 1.17391 0.73731 1.24199 0.94458 0.98402 1.02381 1.24146 0.95082 0.98188 1.01529 1.23842 1.04326 0.93291 0.98484 1.18233 0.84011 0.89685 0.93364 1.84683 1.14069 1.95857 1.33785 1.20693 0.93959 0.95905 1.04135 1.24984 1.05820 0.98780 0.88516 1.86658 1.36752 1.93615 1.16140 0.94907 0.77997 0.77829 0.90136 1.21280 0.92993 0.98806 0.96369 0.90324 0.90853 0.91167 0.85431 0.76290 0.88897 0.88372 0.84989 0.85083 0.85860 0.85659 0.85745 0.85866 0.85663 0.85931 0.88567 0.89514 0.74010 0.85753 0.77777 1.18269 1.17626 0.84359 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.47 10.00 36.01 0.36 1.83 16 2 C -0.10 1.04 5.87 -104.67 -0.61 0.42 16 3 C -0.07 0.80 9.18 -39.20 -0.36 0.45 16 4 C -0.17 1.62 5.89 -104.84 -0.62 1.00 16 5 C 0.56 -5.57 7.76 -12.47 -0.10 -5.66 16 6 O -0.51 3.00 14.78 -16.59 -0.25 2.76 16 7 N -0.72 11.04 5.31 -54.06 -0.29 10.75 16 8 C 0.13 -2.39 4.21 -67.12 -0.28 -2.67 16 9 H 0.12 -1.88 7.50 -51.93 -0.39 -2.27 16 10 C -0.13 2.95 7.39 -25.92 -0.19 2.75 16 11 C -0.15 3.87 3.58 -89.72 -0.32 3.55 16 12 H 0.12 -3.21 6.10 -51.93 -0.32 -3.52 16 13 C 0.00 -0.08 4.48 -3.82 -0.02 -0.10 16 14 N -0.39 12.66 0.66 -251.26 -0.17 12.49 16 15 H 0.43 -14.44 8.44 -39.29 -0.33 -14.78 16 16 C -0.05 1.65 8.98 60.06 0.54 2.19 16 17 C -0.05 1.52 9.19 60.07 0.55 2.07 16 18 C -0.16 3.59 7.45 -25.83 -0.19 3.40 16 19 C 0.19 -1.42 6.69 -38.70 -0.26 -1.68 16 20 O -0.47 2.74 10.91 -40.56 -0.44 2.30 16 21 C -0.15 1.19 5.27 -104.52 -0.55 0.64 16 22 C -0.07 0.54 2.38 36.00 0.09 0.62 16 23 O -0.53 3.35 12.88 -35.23 -0.45 2.90 16 24 Si 0.69 -5.64 30.24 -169.99 -5.14 -10.78 16 25 C -0.08 0.73 8.30 -39.53 -0.33 0.40 16 26 H 0.08 -1.02 8.14 -51.93 -0.42 -1.44 16 27 H 0.07 -0.87 8.08 -51.93 -0.42 -1.29 16 28 H 0.07 -0.94 8.08 -51.93 -0.42 -1.36 16 29 H 0.13 -1.98 6.40 -52.49 -0.34 -2.31 16 30 H 0.40 -7.11 6.74 -40.82 -0.28 -7.38 16 31 H 0.09 -1.95 8.14 -51.93 -0.42 -2.37 16 32 H 0.10 -2.27 8.07 -51.93 -0.42 -2.69 16 33 H 0.13 -4.06 8.09 -51.93 -0.42 -4.48 16 34 H 0.13 -4.04 7.80 -51.93 -0.40 -4.45 16 35 H 0.12 -3.84 8.11 -51.93 -0.42 -4.26 16 36 H 0.12 -3.92 8.14 -51.93 -0.42 -4.35 16 37 H 0.12 -3.83 6.10 -51.93 -0.32 -4.15 16 38 H 0.12 -3.90 8.11 -51.93 -0.42 -4.33 16 39 H 0.12 -3.96 8.14 -51.93 -0.42 -4.38 16 40 H 0.12 -3.86 8.14 -51.93 -0.42 -4.28 16 41 H 0.10 -2.20 7.90 -51.93 -0.41 -2.61 16 42 H 0.09 -1.82 8.14 -51.93 -0.42 -2.24 16 43 H 0.40 -3.22 9.06 45.56 0.41 -2.81 16 44 H 0.12 -0.86 7.83 -51.93 -0.41 -1.27 16 45 H 0.37 -3.53 8.70 45.56 0.40 -3.13 16 46 H -0.26 1.82 6.68 56.52 0.38 2.20 16 47 H -0.25 1.05 7.11 56.52 0.40 1.45 16 48 H 0.14 -1.45 4.83 -52.49 -0.25 -1.70 16 LS Contribution 379.98 15.07 5.73 5.73 Total: 1.00 -38.64 379.98 -10.21 -48.85 By element: Atomic # 1 Polarization: -77.30 SS G_CDS: -6.91 Total: -84.22 kcal Atomic # 6 Polarization: 11.52 SS G_CDS: -2.29 Total: 9.23 kcal Atomic # 7 Polarization: 23.69 SS G_CDS: -0.45 Total: 23.24 kcal Atomic # 8 Polarization: 9.09 SS G_CDS: -1.14 Total: 7.95 kcal Atomic # 14 Polarization: -5.64 SS G_CDS: -5.14 Total: -10.78 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -38.64 -10.21 -48.85 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13422088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 123.797 kcal (2) G-P(sol) polarization free energy of solvation -38.639 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 85.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -48.851 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds