Wall clock time and date at job start Sun Mar 7 2021 06:26:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37782 * 119.84935 * 2 1 4 4 C 1.39709 * 119.90673 * 179.77331 * 3 2 1 5 5 C 1.47539 * 120.19027 * 180.25144 * 4 3 2 6 6 O 1.21593 * 119.99735 * 180.24723 * 5 4 3 7 7 N 1.34773 * 120.00382 * 0.25131 * 5 4 3 8 8 C 1.46497 * 120.00107 * 179.97438 * 7 5 4 9 9 H 1.08994 * 112.84931 * 25.33364 * 8 7 5 10 10 C 1.53787 * 113.61388 * 156.52725 * 8 7 5 11 11 C 1.53777 * 87.08090 * 139.98113 * 10 8 7 12 12 H 1.09001 * 113.61421 * 89.19858 * 11 10 8 13 13 C 1.53002 * 113.61344 * 220.01968 * 11 10 8 14 14 N 1.46899 * 109.46848 * 184.99966 * 13 11 10 15 15 H 1.00904 * 109.47613 * 304.99944 * 14 13 11 16 16 C 1.46900 * 109.47340 * 65.00034 * 14 13 11 17 17 C 1.46904 * 109.46917 * 184.99868 * 14 13 11 18 18 C 1.53780 * 113.61619 * 254.13271 * 8 7 5 19 19 C 1.40139 * 119.61531 * 0.49834 * 4 3 2 20 20 O 1.35660 * 120.14751 * 179.77296 * 19 4 3 21 21 C 1.38705 * 119.70284 * 359.75466 * 19 4 3 22 22 C 1.50690 * 119.96006 * 179.97438 * 21 19 4 23 23 O 1.42902 * 109.46990 * 285.02060 * 22 21 19 24 24 Si 1.86301 * 109.47281 * 165.01943 * 22 21 19 25 25 C 1.38057 * 120.07966 * 359.97438 * 21 19 4 26 26 H 1.09002 * 109.47152 * 269.72442 * 1 2 3 27 27 H 1.09001 * 109.46980 * 149.72543 * 1 2 3 28 28 H 1.09004 * 109.47113 * 29.72523 * 1 2 3 29 29 H 1.07996 * 120.04823 * 0.02562 * 3 2 1 30 30 H 0.97005 * 119.99376 * 359.97438 * 7 5 4 31 31 H 1.09002 * 113.61258 * 254.53348 * 10 8 7 32 32 H 1.09004 * 113.60857 * 25.43222 * 10 8 7 33 33 H 1.08995 * 109.46849 * 304.99958 * 13 11 10 34 34 H 1.09000 * 109.46930 * 65.00365 * 13 11 10 35 35 H 1.08997 * 109.46669 * 59.99709 * 16 14 13 36 36 H 1.08999 * 109.47211 * 179.97438 * 16 14 13 37 37 H 1.08992 * 109.47158 * 300.00128 * 16 14 13 38 38 H 1.09005 * 109.46658 * 60.00330 * 17 14 13 39 39 H 1.09002 * 109.47035 * 179.97438 * 17 14 13 40 40 H 1.08997 * 109.47349 * 300.00448 * 17 14 13 41 41 H 1.09002 * 113.61196 * 334.57323 * 18 8 7 42 42 H 1.09001 * 113.60969 * 105.46665 * 18 8 7 43 43 H 0.96697 * 113.99961 * 269.98194 * 20 19 4 44 44 H 1.08998 * 109.47629 * 45.01786 * 22 21 19 45 45 H 0.96699 * 113.99989 * 299.99873 * 23 22 21 46 46 H 1.48503 * 109.99639 * 58.68308 * 24 22 21 47 47 H 1.48497 * 110.00028 * 179.97438 * 24 22 21 48 48 H 1.07999 * 119.80269 * 179.97438 * 25 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1950 0.0000 4 6 3.5899 1.1964 0.0048 5 6 4.3305 2.4724 0.0104 6 8 5.5464 2.4696 0.0100 7 7 3.6594 3.6412 0.0161 8 6 4.3949 4.9082 0.0222 9 1 5.3925 4.8205 -0.4080 10 6 3.5864 6.0925 -0.5333 11 6 4.2021 6.9394 0.5929 12 1 5.1469 7.4091 0.3193 13 6 3.2155 7.9180 1.2332 14 7 3.9230 8.7590 2.2080 15 1 4.3983 8.1716 2.8767 16 6 4.9049 9.5987 1.5088 17 6 2.9566 9.6155 2.9083 18 6 4.3710 5.6278 1.3810 19 6 4.2837 -0.0212 -0.0010 20 8 5.6402 -0.0324 -0.0011 21 6 3.5771 -1.2148 -0.0063 22 6 4.3172 -2.5274 -0.0132 23 8 4.8544 -2.7645 -1.3160 24 14 3.1446 -3.9039 0.4350 25 6 2.1966 -1.2017 -0.0053 26 1 -0.3633 -0.0049 1.0277 27 1 -0.3633 -0.8875 -0.5181 28 1 -0.3633 0.8925 -0.5096 29 1 1.6511 2.1293 0.0004 30 1 2.6894 3.6434 0.0161 31 1 3.8956 6.4023 -1.5316 32 1 2.5075 5.9649 -0.4438 33 1 2.7761 8.5487 0.4604 34 1 2.4272 7.3604 1.7389 35 1 4.3914 10.2332 0.7865 36 1 5.4295 10.2230 2.2321 37 1 5.6218 8.9633 0.9892 38 1 2.2281 8.9923 3.4271 39 1 3.4815 10.2392 3.6319 40 1 2.4431 10.2500 2.1860 41 1 3.5071 5.3729 1.9949 42 1 5.3127 5.5629 1.9260 43 1 6.0335 -0.0317 -0.8845 44 1 5.1290 -2.4906 0.7133 45 1 4.1871 -2.8095 -2.0144 46 1 2.0164 -3.9442 -0.5298 47 1 3.8623 -5.2039 0.4312 48 1 1.6510 -2.1337 -0.0099 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_13422088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:11 Heat of formation + Delta-G solvation = 46.845173 kcal Electronic energy + Delta-G solvation = -27641.725264 eV Core-core repulsion = 23782.725112 eV Total energy + Delta-G solvation = -3859.000152 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.185 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.21702 -41.70878 -40.39131 -38.97242 -38.07605 -37.80163 -34.85612 -33.11430 -32.71280 -30.02738 -29.38805 -27.58419 -26.87406 -26.82332 -26.16658 -25.13833 -23.33160 -22.06526 -21.59916 -20.78810 -19.67174 -19.28824 -18.44744 -18.15288 -17.76976 -17.48121 -17.16294 -16.98453 -16.47515 -16.18249 -16.08388 -15.94638 -15.71514 -15.09162 -15.01511 -14.59612 -14.40828 -14.28153 -13.84193 -13.65058 -13.56650 -13.48814 -13.42707 -13.34605 -13.23885 -13.17788 -12.98168 -12.94202 -12.56936 -12.28306 -12.21879 -11.89575 -11.78294 -11.73202 -11.50380 -11.05597 -10.59901 -10.29124 -10.01378 -9.53413 -5.01695 -0.38456 0.03203 1.03079 1.19356 1.46447 1.66724 1.88762 2.06025 2.50391 2.92498 2.97225 3.15448 3.16927 3.31663 3.39603 3.42664 3.45935 3.56533 3.72127 3.74664 3.79075 3.86611 4.08531 4.15077 4.16981 4.25380 4.33014 4.36954 4.39418 4.50708 4.51669 4.57123 4.67219 4.70688 4.71520 4.78563 4.80913 4.86699 4.87571 4.88673 4.93315 4.96183 5.04934 5.14110 5.19849 5.22164 5.39346 5.51739 5.64432 6.39592 6.42886 6.64011 7.14256 Molecular weight = 322.19amu Principal moments of inertia in cm(-1) A = 0.023614 B = 0.002675 C = 0.002510 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1185.436994 B =10463.010778 C =11151.875273 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.094 4.094 3 C -0.054 4.054 4 C -0.181 4.181 5 C 0.557 3.443 6 O -0.566 6.566 7 N -0.703 5.703 8 C 0.095 3.905 9 H 0.082 0.918 10 C -0.124 4.124 11 C -0.119 4.119 12 H 0.125 0.875 13 C 0.012 3.988 14 N -0.373 5.373 15 H 0.435 0.565 16 C -0.055 4.055 17 C -0.046 4.046 18 C -0.153 4.153 19 C 0.160 3.840 20 O -0.493 6.493 21 C -0.154 4.154 22 C -0.081 4.081 23 O -0.547 6.547 24 Si 0.772 3.228 25 C -0.084 4.084 26 H 0.088 0.912 27 H 0.069 0.931 28 H 0.088 0.912 29 H 0.170 0.830 30 H 0.415 0.585 31 H 0.079 0.921 32 H 0.117 0.883 33 H 0.146 0.854 34 H 0.147 0.853 35 H 0.124 0.876 36 H 0.125 0.875 37 H 0.118 0.882 38 H 0.126 0.874 39 H 0.123 0.877 40 H 0.122 0.878 41 H 0.112 0.888 42 H 0.070 0.930 43 H 0.401 0.599 44 H 0.109 0.891 45 H 0.386 0.614 46 H -0.264 1.264 47 H -0.310 1.310 48 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.011 34.215 8.596 36.411 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.094 4.094 3 C -0.073 4.073 4 C -0.185 4.185 5 C 0.345 3.655 6 O -0.445 6.445 7 N -0.355 5.355 8 C -0.009 4.009 9 H 0.100 0.900 10 C -0.163 4.163 11 C -0.138 4.138 12 H 0.142 0.858 13 C -0.110 4.110 14 N 0.051 4.949 15 H 0.272 0.728 16 C -0.197 4.197 17 C -0.188 4.188 18 C -0.191 4.191 19 C 0.113 3.887 20 O -0.306 6.306 21 C -0.155 4.155 22 C -0.189 4.189 23 O -0.355 6.355 24 Si 0.677 3.323 25 C -0.102 4.102 26 H 0.107 0.893 27 H 0.088 0.912 28 H 0.107 0.893 29 H 0.187 0.813 30 H 0.254 0.746 31 H 0.098 0.902 32 H 0.136 0.864 33 H 0.164 0.836 34 H 0.165 0.835 35 H 0.143 0.857 36 H 0.144 0.856 37 H 0.136 0.864 38 H 0.145 0.855 39 H 0.141 0.859 40 H 0.140 0.860 41 H 0.130 0.870 42 H 0.089 0.911 43 H 0.259 0.741 44 H 0.127 0.873 45 H 0.235 0.765 46 H -0.189 1.189 47 H -0.238 1.238 48 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -8.156 33.685 9.086 35.829 hybrid contribution 0.800 -0.741 -1.710 2.029 sum -7.356 32.943 7.376 34.551 Atomic orbital electron populations 1.20924 0.88125 1.04354 1.04037 1.20124 0.98020 0.91896 0.99405 1.21418 0.90753 0.99720 0.95392 1.20462 0.95095 0.92741 1.10184 1.18252 0.86785 0.84664 0.75817 1.90832 1.15217 1.87959 1.50540 1.45739 1.10746 1.04459 1.74586 1.22701 0.97130 0.81682 0.99417 0.89968 1.23332 1.01610 0.92260 0.99094 1.22800 1.00555 0.93602 0.96840 0.85753 1.23902 0.96580 0.95450 0.95044 1.44823 1.16500 1.16622 1.17001 0.72824 1.24193 0.94564 0.98438 1.02508 1.24140 0.95035 0.98187 1.01416 1.23777 1.04256 0.94730 0.96375 1.18593 0.83483 0.91076 0.95516 1.84657 1.15594 1.96100 1.34200 1.20591 0.94586 0.95034 1.05288 1.25142 1.05745 1.00234 0.87780 1.86612 1.38067 1.93781 1.17042 0.94002 0.76029 0.73542 0.88774 1.21419 0.92267 0.99975 0.96554 0.89297 0.91218 0.89319 0.81278 0.74570 0.90242 0.86443 0.83636 0.83527 0.85710 0.85639 0.86406 0.85534 0.85857 0.85965 0.87009 0.91116 0.74050 0.87291 0.76484 1.18948 1.23836 0.83582 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 3.11 10.00 71.24 0.71 3.82 16 2 C -0.09 2.07 5.87 -19.90 -0.12 1.95 16 3 C -0.05 1.29 9.18 22.52 0.21 1.50 16 4 C -0.18 2.97 5.89 -20.01 -0.12 2.85 16 5 C 0.56 -9.18 7.76 86.70 0.67 -8.51 16 6 O -0.57 3.76 14.78 16.91 0.25 4.01 16 7 N -0.70 20.23 5.31 -443.20 -2.35 17.88 16 8 C 0.10 -3.22 4.21 45.52 0.19 -3.03 16 9 H 0.08 -2.10 7.50 -2.39 -0.02 -2.12 16 10 C -0.12 5.50 7.39 31.12 0.23 5.73 16 11 C -0.12 6.26 3.58 -10.21 -0.04 6.22 16 12 H 0.12 -6.66 6.10 -2.39 -0.01 -6.68 16 13 C 0.01 -0.76 4.48 86.30 0.39 -0.37 16 14 N -0.37 24.59 0.66 -948.85 -0.62 23.96 16 15 H 0.44 -29.56 8.44 -89.69 -0.76 -30.32 16 16 C -0.05 3.43 8.98 127.69 1.15 4.58 16 17 C -0.05 2.96 9.19 127.69 1.17 4.14 16 18 C -0.15 6.67 7.45 31.18 0.23 6.90 16 19 C 0.16 -1.74 6.69 22.84 0.15 -1.58 16 20 O -0.49 3.11 10.91 -68.84 -0.75 2.36 16 21 C -0.15 2.07 5.27 -19.80 -0.10 1.97 16 22 C -0.08 0.93 2.38 71.23 0.17 1.10 16 23 O -0.55 4.94 12.88 -148.98 -1.92 3.02 16 24 Si 0.77 -10.78 30.24 68.60 2.07 -8.71 16 25 C -0.08 1.51 8.30 22.30 0.19 1.70 16 26 H 0.09 -2.46 8.14 -2.39 -0.02 -2.48 16 27 H 0.07 -1.72 8.08 -2.39 -0.02 -1.74 16 28 H 0.09 -2.62 8.08 -2.38 -0.02 -2.64 16 29 H 0.17 -5.61 6.40 -2.91 -0.02 -5.63 16 30 H 0.42 -14.85 6.74 -92.70 -0.63 -15.48 16 31 H 0.08 -3.23 8.14 -2.39 -0.02 -3.25 16 32 H 0.12 -5.61 8.07 -2.39 -0.02 -5.63 16 33 H 0.15 -9.26 8.09 -2.39 -0.02 -9.28 16 34 H 0.15 -9.42 7.80 -2.39 -0.02 -9.44 16 35 H 0.12 -7.77 8.11 -2.39 -0.02 -7.79 16 36 H 0.13 -7.79 8.14 -2.39 -0.02 -7.80 16 37 H 0.12 -7.17 6.10 -2.39 -0.01 -7.18 16 38 H 0.13 -8.14 8.11 -2.38 -0.02 -8.16 16 39 H 0.12 -7.80 8.14 -2.39 -0.02 -7.82 16 40 H 0.12 -7.78 8.14 -2.39 -0.02 -7.80 16 41 H 0.11 -5.20 7.90 -2.39 -0.02 -5.22 16 42 H 0.07 -2.80 8.14 -2.39 -0.02 -2.82 16 43 H 0.40 -3.99 9.06 -74.06 -0.67 -4.67 16 44 H 0.11 -1.00 7.83 -2.39 -0.02 -1.02 16 45 H 0.39 -6.06 8.70 -74.06 -0.64 -6.70 16 46 H -0.26 3.46 6.68 99.48 0.66 4.13 16 47 H -0.31 1.35 7.11 99.48 0.71 2.06 16 48 H 0.15 -2.95 4.83 -2.91 -0.01 -2.97 16 Total: 1.00 -87.01 379.98 0.07 -86.94 By element: Atomic # 1 Polarization: -156.74 SS G_CDS: -1.69 Total: -158.43 kcal Atomic # 6 Polarization: 23.88 SS G_CDS: 5.08 Total: 28.97 kcal Atomic # 7 Polarization: 44.82 SS G_CDS: -2.98 Total: 41.84 kcal Atomic # 8 Polarization: 11.81 SS G_CDS: -2.42 Total: 9.39 kcal Atomic # 14 Polarization: -10.78 SS G_CDS: 2.07 Total: -8.71 kcal Total: -87.01 0.07 -86.94 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13422088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 133.787 kcal (2) G-P(sol) polarization free energy of solvation -87.009 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.778 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.067 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -86.942 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds