Wall clock time and date at job start Sun Mar 7 2021 06:26:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46894 * 1 3 3 C 1.46895 * 111.00366 * 2 1 4 4 C 1.39049 * 110.99608 * 123.95322 * 2 1 3 5 5 C 1.39207 * 119.93223 * 120.02401 * 4 2 1 6 6 C 1.50699 * 119.96124 * 0.02562 * 5 4 2 7 7 O 1.42894 * 109.47164 * 75.00327 * 6 5 4 8 8 Si 1.86303 * 109.46593 * 195.00351 * 6 5 4 9 9 C 1.37630 * 120.06973 * 179.76126 * 5 4 2 10 10 C 1.39781 * 119.92705 * 0.48824 * 9 5 4 11 11 C 1.47520 * 120.06155 * 179.76500 * 10 9 5 12 12 O 1.21594 * 120.00866 * 359.72288 * 11 10 9 13 13 N 1.34779 * 119.99594 * 179.72002 * 11 10 9 14 14 C 1.46506 * 120.00065 * 179.97438 * 13 11 10 15 15 H 1.09003 * 112.84662 * 23.80940 * 14 13 11 16 16 C 1.53780 * 113.61173 * 155.00258 * 14 13 11 17 17 C 1.53779 * 87.07818 * 139.98483 * 16 14 13 18 18 H 1.09001 * 113.61514 * 89.19942 * 17 16 14 19 19 C 1.53006 * 113.61334 * 220.01959 * 17 16 14 20 20 N 1.46898 * 109.47006 * 184.99842 * 19 17 16 21 21 H 1.00907 * 109.46945 * 55.00252 * 20 19 17 22 22 C 1.46905 * 109.47110 * 174.99627 * 20 19 17 23 23 C 1.46895 * 109.47492 * 294.99809 * 20 19 17 24 24 C 1.53779 * 113.61404 * 252.49954 * 14 13 11 25 25 C 1.39806 * 119.86311 * 359.48906 * 10 9 5 26 26 C 1.37588 * 119.93625 * 0.25294 * 25 10 9 27 27 H 1.09001 * 109.47141 * 296.05363 * 1 2 3 28 28 H 1.09003 * 109.46805 * 56.04779 * 1 2 3 29 29 H 1.09001 * 109.47391 * 176.04886 * 1 2 3 30 30 H 1.09000 * 109.47714 * 183.95122 * 3 2 1 31 31 H 1.08999 * 109.46799 * 303.94972 * 3 2 1 32 32 H 1.09001 * 109.47222 * 63.95163 * 3 2 1 33 33 H 1.09006 * 109.47318 * 314.99752 * 6 5 4 34 34 H 0.96700 * 113.99967 * 179.97438 * 7 6 5 35 35 H 1.48499 * 110.00121 * 299.99664 * 8 6 5 36 36 H 1.48491 * 110.00310 * 61.32047 * 8 6 5 37 37 H 1.08000 * 120.03214 * 180.22458 * 9 5 4 38 38 H 0.96998 * 120.00085 * 0.02562 * 13 11 10 39 39 H 1.08997 * 113.61807 * 25.43836 * 16 14 13 40 40 H 1.08995 * 113.61266 * 254.53018 * 16 14 13 41 41 H 1.09001 * 109.47002 * 304.99624 * 19 17 16 42 42 H 1.08993 * 109.46955 * 65.00062 * 19 17 16 43 43 H 1.08998 * 109.47037 * 60.00086 * 22 20 19 44 44 H 1.09000 * 109.47157 * 180.02562 * 22 20 19 45 45 H 1.08998 * 109.47266 * 300.00131 * 22 20 19 46 46 H 1.09000 * 109.46971 * 59.99785 * 23 20 19 47 47 H 1.09000 * 109.47433 * 180.02562 * 23 20 19 48 48 H 1.08998 * 109.46901 * 300.00065 * 23 20 19 49 49 H 1.09008 * 113.61411 * 105.47303 * 24 14 13 50 50 H 1.08990 * 113.61765 * 334.56937 * 24 14 13 51 51 H 1.08007 * 120.03333 * 180.23174 * 25 10 9 52 52 H 1.08000 * 119.96901 * 180.02562 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.9672 -0.7250 1.0768 5 6 2.7796 -1.8329 0.8520 6 6 3.1182 -2.2441 -0.5577 7 8 4.0875 -1.3432 -1.0969 8 14 3.8133 -3.9726 -0.5502 9 6 3.2783 -2.5496 1.9158 10 6 2.9598 -2.1702 3.2229 11 6 3.4885 -2.9395 4.3652 12 8 4.1979 -3.9076 4.1703 13 7 3.1852 -2.5691 5.6252 14 6 3.7097 -3.3333 6.7597 15 1 4.6180 -3.8842 6.5153 16 6 3.8160 -2.5148 8.0573 17 6 3.3161 -3.7677 8.7956 18 1 4.1163 -4.4378 9.1099 19 6 2.3221 -3.4619 9.9179 20 7 1.9976 -4.7018 10.6359 21 1 2.8492 -5.1355 10.9598 22 6 1.1383 -4.3910 11.7862 23 6 1.2928 -5.6208 9.7324 24 6 2.6457 -4.1823 7.4752 25 6 2.1440 -1.0569 3.4454 26 6 1.6529 -0.3412 2.3779 27 1 -0.3633 0.4514 0.9232 28 1 -0.3633 0.5740 -0.8525 29 1 -0.3634 -1.0252 -0.0708 30 1 3.0828 1.3432 -0.0708 31 1 1.5899 1.9162 -0.8525 32 1 1.7044 1.8723 0.9233 33 1 2.2170 -2.2176 -1.1704 34 1 4.3533 -1.5481 -2.0038 35 1 5.0424 -4.0222 0.2817 36 1 2.8033 -4.9239 -0.0213 37 1 3.9115 -3.4068 1.7407 38 1 2.6190 -1.7970 5.7807 39 1 3.1220 -1.6755 8.1022 40 1 4.8375 -2.2350 8.3145 41 1 2.7650 -2.7463 10.6106 42 1 1.4118 -3.0399 9.4921 43 1 0.2185 -3.9224 11.4364 44 1 0.8980 -5.3109 12.3192 45 1 1.6613 -3.7091 12.4567 46 1 1.9304 -5.8514 8.8789 47 1 1.0517 -6.5406 10.2653 48 1 0.3730 -5.1522 9.3826 49 1 2.7225 -5.2487 7.2625 50 1 1.6319 -3.7989 7.3610 51 1 1.8993 -0.7590 4.4543 52 1 1.0230 0.5192 2.5492 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_13422196.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:16 Heat of formation + Delta-G solvation = 138.785762 kcal Electronic energy + Delta-G solvation = -29574.710944 eV Core-core repulsion = 25661.878679 eV Total energy + Delta-G solvation = -3912.832266 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.212 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -44.57184 -42.64415 -41.78272 -40.49214 -38.36447 -37.92698 -36.07248 -33.72296 -32.56799 -32.03570 -31.78815 -29.25281 -28.60317 -28.24991 -27.58276 -27.13348 -25.55535 -24.03569 -23.53940 -22.87743 -22.06098 -21.46201 -20.32598 -19.83713 -19.71386 -18.89396 -18.74648 -18.42044 -17.97632 -17.58962 -17.28547 -16.99135 -16.69618 -16.53395 -16.48507 -16.33539 -16.01361 -15.98311 -15.91843 -15.62311 -15.57978 -15.36295 -15.25385 -15.18770 -14.83088 -14.79143 -14.39626 -14.32713 -14.15742 -14.02955 -13.78408 -13.58158 -13.41844 -13.31886 -13.29583 -12.72311 -12.48502 -12.01521 -11.38614 -10.92438 -10.76699 -10.57901 -10.24912 -5.52205 -1.49498 -1.19979 -0.65142 0.43254 0.49568 0.65432 0.73658 0.75245 0.90278 1.08768 1.25697 1.37160 1.40673 1.57605 1.63080 1.74320 1.75936 1.81931 1.90924 1.98046 2.06026 2.12105 2.15126 2.23851 2.26845 2.31763 2.58773 2.67780 2.85481 2.89186 2.91439 2.98206 3.04733 3.13136 3.28572 3.30094 3.39586 3.47955 3.57974 3.62114 3.69228 3.77960 3.87461 3.90087 4.02786 4.15826 4.18669 4.23386 4.30095 4.36298 4.50906 4.76036 5.12221 5.25183 5.55133 6.07612 6.15785 Molecular weight = 335.21amu Principal moments of inertia in cm(-1) A = 0.016857 B = 0.002594 C = 0.002401 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1660.586179 B =10792.262537 C =11659.571007 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 N -0.509 5.509 3 C 0.031 3.969 4 C 0.153 3.847 5 C -0.058 4.058 6 C -0.052 4.052 7 O -0.539 6.539 8 Si 0.671 3.329 9 C -0.053 4.053 10 C -0.147 4.147 11 C 0.567 3.433 12 O -0.527 6.527 13 N -0.722 5.722 14 C 0.129 3.871 15 H 0.125 0.875 16 C -0.132 4.132 17 C -0.143 4.143 18 H 0.119 0.881 19 C 0.003 3.997 20 N -0.386 5.386 21 H 0.428 0.572 22 C -0.048 4.048 23 C -0.056 4.056 24 C -0.162 4.162 25 C -0.069 4.069 26 C -0.158 4.158 27 H 0.032 0.968 28 H 0.081 0.919 29 H 0.071 0.929 30 H 0.078 0.922 31 H 0.079 0.921 32 H 0.030 0.970 33 H 0.082 0.918 34 H 0.383 0.617 35 H -0.248 1.248 36 H -0.255 1.255 37 H 0.140 0.860 38 H 0.403 0.597 39 H 0.098 0.902 40 H 0.094 0.906 41 H 0.134 0.866 42 H 0.130 0.870 43 H 0.121 0.879 44 H 0.125 0.875 45 H 0.123 0.877 46 H 0.127 0.873 47 H 0.124 0.876 48 H 0.121 0.879 49 H 0.087 0.913 50 H 0.097 0.903 51 H 0.126 0.874 52 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.901 -6.529 29.109 30.620 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.229 5.229 3 C -0.115 4.115 4 C 0.058 3.942 5 C -0.059 4.059 6 C -0.164 4.164 7 O -0.345 6.345 8 Si 0.573 3.427 9 C -0.072 4.072 10 C -0.150 4.150 11 C 0.355 3.645 12 O -0.404 6.404 13 N -0.374 5.374 14 C 0.024 3.976 15 H 0.143 0.857 16 C -0.171 4.171 17 C -0.162 4.162 18 H 0.137 0.863 19 C -0.119 4.119 20 N 0.039 4.961 21 H 0.263 0.737 22 C -0.190 4.190 23 C -0.198 4.198 24 C -0.200 4.200 25 C -0.089 4.089 26 C -0.179 4.179 27 H 0.051 0.949 28 H 0.100 0.900 29 H 0.090 0.910 30 H 0.097 0.903 31 H 0.098 0.902 32 H 0.048 0.952 33 H 0.100 0.900 34 H 0.231 0.769 35 H -0.173 1.173 36 H -0.180 1.180 37 H 0.157 0.843 38 H 0.239 0.761 39 H 0.117 0.883 40 H 0.112 0.888 41 H 0.152 0.848 42 H 0.148 0.852 43 H 0.140 0.860 44 H 0.143 0.857 45 H 0.142 0.858 46 H 0.145 0.855 47 H 0.142 0.858 48 H 0.140 0.860 49 H 0.106 0.894 50 H 0.115 0.885 51 H 0.144 0.856 52 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -6.337 -7.746 29.495 31.147 hybrid contribution -0.714 1.132 1.226 1.815 sum -7.050 -6.614 30.722 32.207 Atomic orbital electron populations 1.22541 0.85242 1.02999 1.01518 1.59389 1.08500 1.15002 1.40057 1.22472 1.01820 0.86153 1.01057 1.18875 0.93665 0.92683 0.88976 1.19322 0.97560 0.94946 0.94121 1.24415 0.96124 1.03425 0.92423 1.86456 1.59808 1.54390 1.33866 0.95135 0.81581 0.75900 0.90090 1.21113 0.96500 0.98647 0.90975 1.19679 1.03387 0.98686 0.93220 1.18237 0.79635 0.83757 0.82828 1.90838 1.36882 1.27426 1.85226 1.45790 1.53439 1.33059 1.05120 1.22341 0.98070 0.93179 0.84059 0.85727 1.23368 1.03998 0.95769 0.93969 1.22941 0.98306 1.02099 0.92869 0.86348 1.24070 1.04487 0.85315 0.98019 1.45079 1.18451 1.16487 1.16111 0.73746 1.24142 0.98286 1.08238 0.88310 1.24321 1.02088 0.95996 0.97375 1.23912 1.00223 1.02384 0.93499 1.21047 0.95394 0.93482 0.98939 1.21679 1.02108 1.01188 0.92877 0.94937 0.90036 0.91006 0.90331 0.90237 0.95183 0.90008 0.76944 1.17254 1.17968 0.84318 0.76105 0.88348 0.88768 0.84845 0.85208 0.86032 0.85673 0.85807 0.85492 0.85760 0.86039 0.89444 0.88487 0.85590 0.84932 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.20 9.34 60.06 0.56 0.36 16 2 N -0.51 3.53 4.20 -186.86 -0.78 2.74 16 3 C 0.03 -0.23 9.38 60.06 0.56 0.33 16 4 C 0.15 -1.02 4.70 -83.85 -0.39 -1.41 16 5 C -0.06 0.32 5.30 -104.48 -0.55 -0.23 16 6 C -0.05 0.35 2.32 36.01 0.08 0.43 16 7 O -0.54 3.37 12.86 -35.23 -0.45 2.92 16 8 Si 0.67 -4.73 30.20 -169.99 -5.13 -9.86 16 9 C -0.05 0.29 8.19 -39.23 -0.32 -0.03 16 10 C -0.15 1.17 5.88 -104.95 -0.62 0.55 16 11 C 0.57 -5.04 7.76 -12.48 -0.10 -5.14 16 12 O -0.53 2.50 15.94 5.28 0.08 2.59 16 13 N -0.72 10.57 5.30 -54.06 -0.29 10.28 16 14 C 0.13 -2.29 4.24 -67.12 -0.28 -2.58 16 15 H 0.12 -1.86 7.46 -51.93 -0.39 -2.24 16 16 C -0.13 2.90 7.39 -25.92 -0.19 2.71 16 17 C -0.14 3.74 3.31 -89.81 -0.30 3.45 16 18 H 0.12 -3.19 8.09 -51.93 -0.42 -3.61 16 19 C 0.00 -0.08 4.57 -3.82 -0.02 -0.10 16 20 N -0.39 12.56 0.66 -251.26 -0.17 12.40 16 21 H 0.43 -14.61 8.41 -39.29 -0.33 -14.94 16 22 C -0.05 1.52 9.19 60.07 0.55 2.07 16 23 C -0.06 1.72 8.57 60.06 0.51 2.23 16 24 C -0.16 3.64 5.69 -25.92 -0.15 3.49 16 25 C -0.07 0.73 9.53 -39.23 -0.37 0.35 16 26 C -0.16 1.42 8.53 -39.45 -0.34 1.08 16 27 H 0.03 -0.30 7.10 -51.93 -0.37 -0.67 16 28 H 0.08 -0.73 8.12 -51.93 -0.42 -1.15 16 29 H 0.07 -0.60 8.14 -51.93 -0.42 -1.03 16 30 H 0.08 -0.48 8.14 -51.93 -0.42 -0.91 16 31 H 0.08 -0.64 8.12 -51.93 -0.42 -1.06 16 32 H 0.03 -0.25 7.32 -51.93 -0.38 -0.63 16 33 H 0.08 -0.60 7.78 -51.93 -0.40 -1.00 16 34 H 0.38 -4.05 8.74 45.56 0.40 -3.66 16 35 H -0.25 0.95 6.74 56.52 0.38 1.33 16 36 H -0.26 1.19 7.11 56.52 0.40 1.59 16 37 H 0.14 -0.56 4.47 -52.49 -0.23 -0.80 16 38 H 0.40 -6.94 6.75 -40.82 -0.28 -7.22 16 39 H 0.10 -2.24 8.08 -51.93 -0.42 -2.66 16 40 H 0.09 -1.93 8.14 -51.93 -0.42 -2.35 16 41 H 0.13 -4.11 8.09 -51.93 -0.42 -4.53 16 42 H 0.13 -3.94 7.79 -51.93 -0.40 -4.35 16 43 H 0.12 -3.79 8.14 -51.93 -0.42 -4.21 16 44 H 0.12 -3.94 8.14 -51.93 -0.42 -4.36 16 45 H 0.12 -3.91 8.11 -51.93 -0.42 -4.33 16 46 H 0.13 -3.73 5.13 -51.93 -0.27 -4.00 16 47 H 0.12 -3.83 8.14 -51.93 -0.42 -4.25 16 48 H 0.12 -3.69 8.11 -51.93 -0.42 -4.11 16 49 H 0.09 -1.90 7.18 -51.92 -0.37 -2.27 16 50 H 0.10 -2.26 7.89 -51.93 -0.41 -2.67 16 51 H 0.13 -1.85 6.39 -52.48 -0.34 -2.19 16 52 H 0.13 -1.39 6.99 -52.49 -0.37 -1.76 16 LS Contribution 401.85 15.07 6.06 6.06 Total: 1.00 -38.46 401.85 -10.88 -49.34 By element: Atomic # 1 Polarization: -75.18 SS G_CDS: -8.84 Total: -84.02 kcal Atomic # 6 Polarization: 8.92 SS G_CDS: -1.36 Total: 7.56 kcal Atomic # 7 Polarization: 26.66 SS G_CDS: -1.24 Total: 25.42 kcal Atomic # 8 Polarization: 5.87 SS G_CDS: -0.37 Total: 5.51 kcal Atomic # 14 Polarization: -4.73 SS G_CDS: -5.13 Total: -9.86 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -38.46 -10.88 -49.34 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13422196.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 188.123 kcal (2) G-P(sol) polarization free energy of solvation -38.458 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 149.665 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.879 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -49.337 kcal (6) G-S(sol) free energy of system = (1) + (5) 138.786 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds